RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 TMF1P82094 1093 aa11.02□□□□□ -0.64
SSR1-210ENST00000489567 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.64
SSR1-210ENST00000489567 SLC12A5Q9H2X9 1139 aa11.02□□□□□ -0.64
SSR1-210ENST00000489567 CD163L1Q9NR16 1453 aa11.02□□□□□ -0.65
SSR1-210ENST00000489567 PAK3O75914 559 aaPredicted RBP11.02□□□□□ -0.65
SSR1-210ENST00000489567 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
SSR1-210ENST00000489567 CABLES1Q8TDN4 633 aa11.02□□□□□ -0.65
SSR1-210ENST00000489567 ALS2Q96Q42 1657 aa11.01□□□□□ -0.65
SSR1-210ENST00000489567 CPSF1Q10570 1443 aaKnown RBP11.01□□□□□ -0.65
SSR1-210ENST00000489567 TMC1Q8TDI8 760 aa11.01□□□□□ -0.65
SSR1-210ENST00000489567 PUS7Q96PZ0 661 aaKnown RBP11.01□□□□□ -0.65
SSR1-210ENST00000489567 USP6P35125 1406 aa11.01□□□□□ -0.65
SSR1-210ENST00000489567 SSH2Q76I76 1423 aa11□□□□□ -0.65
SSR1-210ENST00000489567 C11orf95C9JLR9 678 aaPredicted RBP11□□□□□ -0.65
SSR1-210ENST00000489567 ADAMTS2O95450 1211 aa11□□□□□ -0.65
SSR1-210ENST00000489567 NUTM2GQ5VZR2 741 aa11□□□□□ -0.65
SSR1-210ENST00000489567 CNKSR2Q8WXI2 1034 aa11□□□□□ -0.65
SSR1-210ENST00000489567 RGS17Q9UGC6 210 aaPredicted RBP11□□□□□ -0.65
SSR1-210ENST00000489567 ARHGEF10O15013 1369 aa10.99□□□□□ -0.65
SSR1-210ENST00000489567 AKAP12Q02952 1782 aa10.99□□□□□ -0.65
SSR1-210ENST00000489567 DAXXQ9UER7 740 aaPredicted RBP10.98□□□□□ -0.65
SSR1-210ENST00000489567 A0A1W2PP64 1363 aa10.98□□□□□ -0.65
SSR1-210ENST00000489567 KTN1Q86UP2 1357 aaKnown RBP10.98□□□□□ -0.65
SSR1-210ENST00000489567 MEX3CQ5U5Q3 659 aaKnown RBP10.98□□□□□ -0.65
SSR1-210ENST00000489567 ZNF692Q9BU19 519 aaPredicted RBP10.98□□□□□ -0.65
SSR1-210ENST00000489567 ABCA3Q99758 1704 aa10.97□□□□□ -0.65
SSR1-210ENST00000489567 NRKQ7Z2Y5 1582 aa10.97□□□□□ -0.65
SSR1-210ENST00000489567 ABTB2Q8N961 1025 aa10.97□□□□□ -0.65
SSR1-210ENST00000489567 C8orf37Q96NL8 207 aa10.97□□□□□ -0.65
SSR1-210ENST00000489567 TTC21BQ7Z4L5 1316 aa10.97□□□□□ -0.65
SSR1-210ENST00000489567 MON2Q7Z3U7 1717 aa10.96□□□□□ -0.65
SSR1-210ENST00000489567 CRYBG1Q9Y4K1 1723 aa10.96□□□□□ -0.65
SSR1-210ENST00000489567 MYOM1P52179 1685 aa10.96□□□□□ -0.66
SSR1-210ENST00000489567 CDCA8Q53HL2 280 aa10.95□□□□□ -0.66
SSR1-210ENST00000489567 POLR3GLQ9BT43 218 aa10.95□□□□□ -0.66
SSR1-210ENST00000489567 PIK3C2AO00443 1686 aa10.95□□□□□ -0.66
SSR1-210ENST00000489567 BRD4O60885 1362 aaPredicted RBP10.95□□□□□ -0.66
SSR1-210ENST00000489567 NINLQ9Y2I6 1382 aa10.95□□□□□ -0.66
SSR1-210ENST00000489567 HDGFL2Q7Z4V5 671 aaPredicted RBP10.95□□□□□ -0.66
SSR1-210ENST00000489567 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.95□□□□□ -0.662e-7■□□□□ 10
SSR1-210ENST00000489567 TERF2IPQ9NYB0 399 aa10.95□□□□□ -0.66
SSR1-210ENST00000489567 ZRANB1Q9UGI0 708 aa10.95□□□□□ -0.66
SSR1-210ENST00000489567 HAP1P54257 671 aaPredicted RBP10.94□□□□□ -0.66
SSR1-210ENST00000489567 AFF2P51816 1311 aa10.94□□□□□ -0.66
SSR1-210ENST00000489567 ANKRD36BQ8N2N9 1353 aa10.94□□□□□ -0.66
SSR1-210ENST00000489567 NLRP6P59044 892 aa10.93□□□□□ -0.66
SSR1-210ENST00000489567 POTEAQ6S8J7 498 aa10.93□□□□□ -0.66
SSR1-210ENST00000489567 NME9Q86XW9 330 aa10.93□□□□□ -0.66
SSR1-210ENST00000489567 NGLY1Q96IV0 654 aa10.93□□□□□ -0.66
SSR1-210ENST00000489567 USP19O94966 1318 aa10.93□□□□□ -0.66
SSR1-210ENST00000489567 EDC4Q6P2E9 1401 aaKnown RBP10.93□□□□□ -0.66
SSR1-210ENST00000489567 PHRF1Q9P1Y6 1649 aaKnown RBP10.93□□□□□ -0.66
SSR1-210ENST00000489567 NLRP13Q86W25 1043 aa10.93□□□□□ -0.66
SSR1-210ENST00000489567 CARD14Q9BXL6 1004 aa10.93□□□□□ -0.66
SSR1-210ENST00000489567 TTC21AQ8NDW8 1320 aa10.93□□□□□ -0.66
SSR1-210ENST00000489567 MARF1Q9Y4F3 1742 aaKnown RBP10.93□□□□□ -0.66
SSR1-210ENST00000489567 KIF7Q2M1P5 1343 aa10.92□□□□□ -0.66
SSR1-210ENST00000489567 FAM83GA6ND36 823 aa10.92□□□□□ -0.66
SSR1-210ENST00000489567 ILDR2Q71H61 639 aa10.92□□□□□ -0.66
SSR1-210ENST00000489567 FNBP4Q8N3X1 1017 aaPredicted RBP10.92□□□□□ -0.66
SSR1-210ENST00000489567 ZC3H6P61129 1189 aaKnown RBP10.91□□□□□ -0.66
SSR1-210ENST00000489567 BCL9LQ86UU0 1499 aa10.91□□□□□ -0.66
SSR1-210ENST00000489567 KIAA0232Q92628 1395 aa10.91□□□□□ -0.66
SSR1-210ENST00000489567 GCP02774 474 aa10.91□□□□□ -0.66
SSR1-210ENST00000489567 SLIT3O75094 1523 aa10.9□□□□□ -0.66
SSR1-210ENST00000489567 SLIT2O94813 1529 aa10.9□□□□□ -0.66
SSR1-210ENST00000489567 USP21Q9UK80 565 aa10.9□□□□□ -0.66
SSR1-210ENST00000489567 USP31Q70CQ4 1352 aa10.9□□□□□ -0.67
SSR1-210ENST00000489567 WASHC2AQ641Q2 1341 aa10.89□□□□□ -0.67
SSR1-210ENST00000489567 SOX12O15370 315 aa10.89□□□□□ -0.67
SSR1-210ENST00000489567 CHRNA2Q15822 529 aa10.89□□□□□ -0.67
SSR1-210ENST00000489567 ZNF772Q68DY9 489 aaPredicted RBP10.89□□□□□ -0.67
SSR1-210ENST00000489567 PRDM11Q9NQV5 511 aa10.89□□□□□ -0.67
SSR1-210ENST00000489567 OVOS2A0A0J9YW53 1432 aa10.88□□□□□ -0.67
SSR1-210ENST00000489567 OVOS2Q6IE36 1432 aa10.88□□□□□ -0.67
SSR1-210ENST00000489567 NSD3Q9BZ95 1437 aa10.88□□□□□ -0.67
SSR1-210ENST00000489567 PLCH1Q4KWH8 1693 aa10.88□□□□□ -0.67
SSR1-210ENST00000489567 FYB1O15117 783 aa10.88□□□□□ -0.67
SSR1-210ENST00000489567 PANK3Q9H999 370 aa10.88□□□□□ -0.67
SSR1-210ENST00000489567 CPDO75976 1380 aa10.88□□□□□ -0.67
SSR1-210ENST00000489567 CCDC7Q96M83 1385 aa10.88□□□□□ -0.67
SSR1-210ENST00000489567 USP54Q70EL1 1684 aa10.88□□□□□ -0.67
SSR1-210ENST00000489567 GGNBP2Q9H3C7 697 aa10.87□□□□□ -0.67
SSR1-210ENST00000489567 QTRT2Q9H974 415 aaKnown RBP10.87□□□□□ -0.67
SSR1-210ENST00000489567 BTG4Q9NY30 223 aa10.87□□□□□ -0.67
SSR1-210ENST00000489567 NFAT5O94916 1531 aa10.87□□□□□ -0.67
SSR1-210ENST00000489567 COL14A1Q05707 1796 aaKnown RBP10.87□□□□□ -0.67
SSR1-210ENST00000489567 FBLN1P23142 703 aa10.87□□□□□ -0.67
SSR1-210ENST00000489567 UNC5CLQ8IV45 518 aa10.87□□□□□ -0.67
SSR1-210ENST00000489567 ATRNO75882 1429 aa10.86□□□□□ -0.67
SSR1-210ENST00000489567 ZBTB7CA1YPR0 619 aa10.86□□□□□ -0.67
SSR1-210ENST00000489567 DCAF8L1A6NGE4 600 aa10.86□□□□□ -0.67
SSR1-210ENST00000489567 NRAPQ86VF7 1730 aa10.86□□□□□ -0.67
SSR1-210ENST00000489567 CAMTA1Q9Y6Y1 1673 aa10.85□□□□□ -0.67
SSR1-210ENST00000489567 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
SSR1-210ENST00000489567 ZEB1P37275 1124 aaPredicted RBP10.85□□□□□ -0.67
SSR1-210ENST00000489567 ARHGEF25Q86VW2 580 aa10.85□□□□□ -0.67
SSR1-210ENST00000489567 NWD2Q9ULI1 1742 aa10.85□□□□□ -0.67
SSR1-210ENST00000489567 LMO7Q8WWI1 1683 aa10.85□□□□□ -0.67
SSR1-210ENST00000489567 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms