RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 ESCO1Q5FWF5 840 aa15.63■□□□□ 0.09
CMSS1-205ENST00000489081 NGDNQ8NEJ9 315 aaKnown RBP15.63■□□□□ 0.09
CMSS1-205ENST00000489081 XIRP1Q702N8 1843 aaKnown RBP15.63■□□□□ 0.09
CMSS1-205ENST00000489081 FYB1O15117 783 aa15.62■□□□□ 0.09
CMSS1-205ENST00000489081 RGPD8O14715 1765 aaPredicted RBP15.62■□□□□ 0.09
CMSS1-205ENST00000489081 AKAP12Q02952 1782 aa15.62■□□□□ 0.09
CMSS1-205ENST00000489081 LTBP4Q8N2S1 1624 aa15.61■□□□□ 0.09
CMSS1-205ENST00000489081 SSH2Q76I76 1423 aa15.61■□□□□ 0.09
CMSS1-205ENST00000489081 MON2Q7Z3U7 1717 aa15.61■□□□□ 0.09
CMSS1-205ENST00000489081 ZBTB22O15209 634 aa15.61■□□□□ 0.09
CMSS1-205ENST00000489081 CCDC184Q52MB2 194 aa15.61■□□□□ 0.09
CMSS1-205ENST00000489081 ORAI2Q96SN7 254 aa15.61■□□□□ 0.09
CMSS1-205ENST00000489081 TTC21BQ7Z4L5 1316 aa15.61■□□□□ 0.09
CMSS1-205ENST00000489081 MORC1Q86VD1 984 aa15.6■□□□□ 0.09
CMSS1-205ENST00000489081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.6■□□□□ 0.09
CMSS1-205ENST00000489081 GGNBP2Q9H3C7 697 aa15.6■□□□□ 0.09
CMSS1-205ENST00000489081 NLRP13Q86W25 1043 aa15.59■□□□□ 0.09
CMSS1-205ENST00000489081 NRKQ7Z2Y5 1582 aa15.58■□□□□ 0.09
CMSS1-205ENST00000489081 PPP2R1AP30153 589 aa15.58■□□□□ 0.08
CMSS1-205ENST00000489081 NME9Q86XW9 330 aa15.58■□□□□ 0.08
CMSS1-205ENST00000489081 BRD4O60885 1362 aaPredicted RBP15.58■□□□□ 0.08
CMSS1-205ENST00000489081 MRS2Q9HD23 443 aa15.57■□□□□ 0.08
CMSS1-205ENST00000489081 TTC21AQ8NDW8 1320 aa15.57■□□□□ 0.08
CMSS1-205ENST00000489081 FOXO3O43524 673 aa15.55■□□□□ 0.08
CMSS1-205ENST00000489081 ZRANB1Q9UGI0 708 aa15.55■□□□□ 0.08
CMSS1-205ENST00000489081 KIF1AQ12756 1690 aa15.54■□□□□ 0.08
CMSS1-205ENST00000489081 PSME1Q06323 249 aa15.54■□□□□ 0.08
CMSS1-205ENST00000489081 SLAIN2Q9P270 581 aa15.54■□□□□ 0.08
CMSS1-205ENST00000489081 KIF20BQ96Q89 1820 aa15.54■□□□□ 0.08
CMSS1-205ENST00000489081 TNNT2P45379 298 aaPredicted RBP15.53■□□□□ 0.08
CMSS1-205ENST00000489081 BRINP3Q76B58 766 aa15.53■□□□□ 0.08
CMSS1-205ENST00000489081 COG3Q96JB2 828 aa15.53■□□□□ 0.08
CMSS1-205ENST00000489081 OVOS2A0A0J9YW53 1432 aa15.52■□□□□ 0.08
CMSS1-205ENST00000489081 OVOS2Q6IE36 1432 aa15.52■□□□□ 0.08
CMSS1-205ENST00000489081 USP31Q70CQ4 1352 aa15.52■□□□□ 0.08
CMSS1-205ENST00000489081 ANKRD26Q9UPS8 1709 aa15.52■□□□□ 0.08
CMSS1-205ENST00000489081 KRT28Q7Z3Y7 464 aa15.51■□□□□ 0.07
CMSS1-205ENST00000489081 NPHP3Q7Z494 1330 aa15.5■□□□□ 0.07
CMSS1-205ENST00000489081 PAK3O75914 559 aaPredicted RBP15.5■□□□□ 0.07
CMSS1-205ENST00000489081 XPCQ01831 940 aaPredicted RBP15.49■□□□□ 0.07
CMSS1-205ENST00000489081 PNISRQ8TF01 805 aaKnown RBP15.49■□□□□ 0.07
CMSS1-205ENST00000489081 AATKQ6ZMQ8 1374 aa15.49■□□□□ 0.07
CMSS1-205ENST00000489081 PIK3C2AO00443 1686 aa15.48■□□□□ 0.07
CMSS1-205ENST00000489081 MTHFSP49914 203 aa15.48■□□□□ 0.07
CMSS1-205ENST00000489081 ABTB2Q8N961 1025 aa15.48■□□□□ 0.07
CMSS1-205ENST00000489081 DDX17Q92841 729 aaKnown RBP15.48■□□□□ 0.07
CMSS1-205ENST00000489081 NLRP6P59044 892 aa15.47■□□□□ 0.07
CMSS1-205ENST00000489081 SBNO1A3KN83 1393 aa15.47■□□□□ 0.07
CMSS1-205ENST00000489081 FBLN1P23142 703 aa15.46■□□□□ 0.07
CMSS1-205ENST00000489081 FAM9BQ8IZU0 186 aa15.46■□□□□ 0.07
CMSS1-205ENST00000489081 POLKQ9UBT6 870 aa15.46■□□□□ 0.07
CMSS1-205ENST00000489081 PXDNQ92626 1479 aa15.46■□□□□ 0.06
CMSS1-205ENST00000489081 TRPM3Q9HCF6 1732 aaPredicted RBP15.46■□□□□ 0.06
CMSS1-205ENST00000489081 NUTM2GQ5VZR2 741 aa15.45■□□□□ 0.06
CMSS1-205ENST00000489081 USP54Q70EL1 1684 aa15.44■□□□□ 0.06
CMSS1-205ENST00000489081 SOS2Q07890 1332 aaPredicted RBP15.43■□□□□ 0.06
CMSS1-205ENST00000489081 SMG6Q86US8 1419 aaKnown RBP15.43■□□□□ 0.06
CMSS1-205ENST00000489081 CFAP53Q96M91 514 aa15.43■□□□□ 0.06
CMSS1-205ENST00000489081 YTHDC1Q96MU7 727 aaKnown RBP15.43■□□□□ 0.06
CMSS1-205ENST00000489081 IQSEC2Q5JU85 1478 aa15.42■□□□□ 0.06
CMSS1-205ENST00000489081 INSRP06213 1382 aa15.42■□□□□ 0.06
CMSS1-205ENST00000489081 PNPLA6Q8IY17 1366 aa15.42■□□□□ 0.06
CMSS1-205ENST00000489081 RRS1Q15050 365 aaKnown RBP15.42■□□□□ 0.06
CMSS1-205ENST00000489081 EMILIN1Q9Y6C2 1016 aa15.42■□□□□ 0.06
CMSS1-205ENST00000489081 TNS3Q68CZ2 1445 aa15.42■□□□□ 0.06
CMSS1-205ENST00000489081 USP19O94966 1318 aa15.42■□□□□ 0.06
CMSS1-205ENST00000489081 SPATA31A3Q5VYP0 1347 aa15.42■□□□□ 0.06
CMSS1-205ENST00000489081 MARF1Q9Y4F3 1742 aaKnown RBP15.41■□□□□ 0.06
CMSS1-205ENST00000489081 LMOD2Q6P5Q4 547 aa15.41■□□□□ 0.06
CMSS1-205ENST00000489081 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
CMSS1-205ENST00000489081 COL3A1P02461 1466 aaPredicted RBP15.4■□□□□ 0.06
CMSS1-205ENST00000489081 SOX12O15370 315 aa15.4■□□□□ 0.06
CMSS1-205ENST00000489081 TOM1O60784 492 aa15.4■□□□□ 0.06
CMSS1-205ENST00000489081 ALS2Q96Q42 1657 aa15.4■□□□□ 0.06
CMSS1-205ENST00000489081 CDK12Q9NYV4 1490 aaPredicted RBP15.4■□□□□ 0.06
CMSS1-205ENST00000489081 SLIT3O75094 1523 aa15.39■□□□□ 0.05
CMSS1-205ENST00000489081 WDR43Q15061 677 aaKnown RBP eCLIP15.39■□□□□ 0.05
CMSS1-205ENST00000489081 CERKQ8TCT0 537 aa15.39■□□□□ 0.05
CMSS1-205ENST00000489081 MAP3K19Q56UN5 1328 aa15.39■□□□□ 0.05
CMSS1-205ENST00000489081 NHSL1Q5SYE7 1610 aa15.39■□□□□ 0.05
CMSS1-205ENST00000489081 ARHGEF10O15013 1369 aa15.38■□□□□ 0.05
CMSS1-205ENST00000489081 PPM1GO15355 546 aaPredicted RBP15.38■□□□□ 0.05
CMSS1-205ENST00000489081 KCNH5Q8NCM2 988 aa15.38■□□□□ 0.05
CMSS1-205ENST00000489081 ADAMTS8Q9UP79 889 aa15.38■□□□□ 0.05
CMSS1-205ENST00000489081 ROBO1Q9Y6N7 1651 aa15.38■□□□□ 0.05
CMSS1-205ENST00000489081 NFAT5O94916 1531 aa15.38■□□□□ 0.05
CMSS1-205ENST00000489081 GCP02774 474 aa15.37■□□□□ 0.05
CMSS1-205ENST00000489081 AHDC1Q5TGY3 1603 aaPredicted RBP15.36■□□□□ 0.05
CMSS1-205ENST00000489081 UBAP1LF5GYI3 381 aa15.36■□□□□ 0.05
CMSS1-205ENST00000489081 DIAPH1O60610 1272 aaKnown RBP15.36■□□□□ 0.05
CMSS1-205ENST00000489081 MAP2P11137 1827 aaKnown RBP15.36■□□□□ 0.05
CMSS1-205ENST00000489081 KIF24Q5T7B8 1368 aa15.36■□□□□ 0.05
CMSS1-205ENST00000489081 NUDCQ9Y266 331 aa15.35■□□□□ 0.05
CMSS1-205ENST00000489081 MED1Q15648 1581 aaPredicted RBP15.35■□□□□ 0.05
CMSS1-205ENST00000489081 SHPRHQ149N8 1683 aa15.35■□□□□ 0.05
CMSS1-205ENST00000489081 AMPHP49418 695 aa15.34■□□□□ 0.05
CMSS1-205ENST00000489081 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
CMSS1-205ENST00000489081 FLT4P35916 1363 aa15.34■□□□□ 0.05
CMSS1-205ENST00000489081 PEAK1Q9H792 1746 aa15.34■□□□□ 0.05
CMSS1-205ENST00000489081 BLMP54132 1417 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms