RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 CDCA8Q53HL2 280 aa24.36■■□□□ 1.49
COL16A1-215ENST00000488897 ZRANB1Q9UGI0 708 aa24.36■■□□□ 1.49
COL16A1-215ENST00000488897 PAK3O75914 559 aaPredicted RBP24.36■■□□□ 1.49
COL16A1-215ENST00000488897 MYOM1P52179 1685 aa24.35■■□□□ 1.49
COL16A1-215ENST00000488897 A0A1W2PP64 1363 aa24.35■■□□□ 1.49
COL16A1-215ENST00000488897 LMOD2Q6P5Q4 547 aa24.34■■□□□ 1.49
COL16A1-215ENST00000488897 ERICH6Q7L0X2 663 aa24.34■■□□□ 1.49
COL16A1-215ENST00000488897 CD163L1Q9NR16 1453 aa24.34■■□□□ 1.49
COL16A1-215ENST00000488897 TOM1O60784 492 aa24.34■■□□□ 1.49
COL16A1-215ENST00000488897 ATAD2Q6PL18 1390 aa24.34■■□□□ 1.49
COL16A1-215ENST00000488897 PSME1Q06323 249 aa24.33■■□□□ 1.49
COL16A1-215ENST00000488897 FBLN1P23142 703 aa24.32■■□□□ 1.48
COL16A1-215ENST00000488897 DCCP43146 1447 aa24.31■■□□□ 1.48
COL16A1-215ENST00000488897 PLEKHG3A1L390 1219 aa24.3■■□□□ 1.48
COL16A1-215ENST00000488897 SOX12O15370 315 aa24.29■■□□□ 1.48
COL16A1-215ENST00000488897 CC2D1BQ5T0F9 858 aaKnown RBP24.29■■□□□ 1.48
COL16A1-215ENST00000488897 SLC24A1O60721 1099 aa24.29■■□□□ 1.48
COL16A1-215ENST00000488897 KRT28Q7Z3Y7 464 aa24.29■■□□□ 1.48
COL16A1-215ENST00000488897 CCDC136Q96JN2 1154 aa24.28■■□□□ 1.48
COL16A1-215ENST00000488897 NME9Q86XW9 330 aa24.27■■□□□ 1.48
COL16A1-215ENST00000488897 ANKARQ7Z5J8 1434 aa24.27■■□□□ 1.48
COL16A1-215ENST00000488897 ROBO1Q9Y6N7 1651 aa24.27■■□□□ 1.48
COL16A1-215ENST00000488897 TOPAZ1Q8N9V7 1692 aa24.27■■□□□ 1.47
COL16A1-215ENST00000488897 TNNT2P45379 298 aaPredicted RBP24.26■■□□□ 1.47
COL16A1-215ENST00000488897 HDGFL2Q7Z4V5 671 aaPredicted RBP24.26■■□□□ 1.47
COL16A1-215ENST00000488897 GGNBP2Q9H3C7 697 aa24.26■■□□□ 1.47
COL16A1-215ENST00000488897 PER1O15534 1290 aaPredicted RBP24.26■■□□□ 1.47
COL16A1-215ENST00000488897 TERF2IPQ9NYB0 399 aa24.25■■□□□ 1.47
COL16A1-215ENST00000488897 NSD3Q9BZ95 1437 aa24.25■■□□□ 1.47
COL16A1-215ENST00000488897 NLRP13Q86W25 1043 aa24.25■■□□□ 1.47
COL16A1-215ENST00000488897 CABLES1Q8TDN4 633 aa24.24■■□□□ 1.47
COL16A1-215ENST00000488897 PUS7Q96PZ0 661 aaKnown RBP24.23■■□□□ 1.47
COL16A1-215ENST00000488897 CPSF1Q10570 1443 aaKnown RBP24.23■■□□□ 1.47
COL16A1-215ENST00000488897 PARD3Q8TEW0 1356 aa24.23■■□□□ 1.47
COL16A1-215ENST00000488897 ANKRD36BQ8N2N9 1353 aa24.23■■□□□ 1.47
COL16A1-215ENST00000488897 POLR3AO14802 1390 aaPredicted RBP24.21■■□□□ 1.47
COL16A1-215ENST00000488897 KNSTRNQ9Y448 316 aa24.2■■□□□ 1.46
COL16A1-215ENST00000488897 USP6P35125 1406 aa24.2■■□□□ 1.46
COL16A1-215ENST00000488897 TTC21BQ7Z4L5 1316 aa24.2■■□□□ 1.46
COL16A1-215ENST00000488897 ABTB2Q8N961 1025 aa24.2■■□□□ 1.46
COL16A1-215ENST00000488897 FYB1O15117 783 aa24.19■■□□□ 1.46
COL16A1-215ENST00000488897 HSPA1LP34931 641 aa24.19■■□□□ 1.46
COL16A1-215ENST00000488897 PDE3BQ13370 1112 aa24.19■■□□□ 1.46
COL16A1-215ENST00000488897 ITSN1Q15811 1721 aa24.19■■□□□ 1.46
COL16A1-215ENST00000488897 NPHP3Q7Z494 1330 aa24.17■■□□□ 1.46
COL16A1-215ENST00000488897 ZNF692Q9BU19 519 aaPredicted RBP24.17■■□□□ 1.46
COL16A1-215ENST00000488897 SENP3-EIF4A1A0A087X0R7 540 aa24.15■■□□□ 1.46
COL16A1-215ENST00000488897 NLRP6P59044 892 aa24.15■■□□□ 1.46
COL16A1-215ENST00000488897 AMER1Q5JTC6 1135 aaPredicted RBP24.15■■□□□ 1.46
COL16A1-215ENST00000488897 INSRP06213 1382 aa24.14■■□□□ 1.45
COL16A1-215ENST00000488897 ZBTB7CA1YPR0 619 aa24.13■■□□□ 1.45
COL16A1-215ENST00000488897 RRP1P56182 461 aaKnown RBP24.13■■□□□ 1.45
COL16A1-215ENST00000488897 AKAP12Q02952 1782 aa24.13■■□□□ 1.45
COL16A1-215ENST00000488897 PXDNQ92626 1479 aa24.13■■□□□ 1.45
COL16A1-215ENST00000488897 SOS2Q07890 1332 aaPredicted RBP24.12■■□□□ 1.45
COL16A1-215ENST00000488897 SSH2Q76I76 1423 aa24.12■■□□□ 1.45
COL16A1-215ENST00000488897 NINLQ9Y2I6 1382 aa24.11■■□□□ 1.45
COL16A1-215ENST00000488897 RCAN3Q9UKA8 241 aa24.11■■□□□ 1.45
COL16A1-215ENST00000488897 MON2Q7Z3U7 1717 aa24.09■■□□□ 1.45
COL16A1-215ENST00000488897 EDC4Q6P2E9 1401 aaKnown RBP24.09■■□□□ 1.45
COL16A1-215ENST00000488897 SPATA31A3Q5VYP0 1347 aa24.09■■□□□ 1.45
COL16A1-215ENST00000488897 NUTM2BA6NNL0 878 aaPredicted RBP24.09■■□□□ 1.45
COL16A1-215ENST00000488897 NUTM2EB1AL46 878 aaPredicted RBP24.09■■□□□ 1.45
COL16A1-215ENST00000488897 NUTM2AQ8IVF1 878 aaPredicted RBP24.09■■□□□ 1.45
COL16A1-215ENST00000488897 IQSEC2Q5JU85 1478 aa24.08■■□□□ 1.45
COL16A1-215ENST00000488897 CGNL1Q0VF96 1302 aa24.08■■□□□ 1.45
COL16A1-215ENST00000488897 KIF1AQ12756 1690 aa24.08■■□□□ 1.44
COL16A1-215ENST00000488897 PHLPP1O60346 1717 aa24.07■■□□□ 1.44
COL16A1-215ENST00000488897 RRS1Q15050 365 aaKnown RBP24.07■■□□□ 1.44
COL16A1-215ENST00000488897 ZC3H6P61129 1189 aaKnown RBP24.06■■□□□ 1.44
COL16A1-215ENST00000488897 NOP58Q9Y2X3 529 aaKnown RBP24.06■■□□□ 1.44
COL16A1-215ENST00000488897 NHSL1Q5SYE7 1610 aa24.05■■□□□ 1.44
COL16A1-215ENST00000488897 PIK3C2AO00443 1686 aa24.05■■□□□ 1.44
COL16A1-215ENST00000488897 NRKQ7Z2Y5 1582 aa24.05■■□□□ 1.44
COL16A1-215ENST00000488897 PPM1GO15355 546 aaPredicted RBP24.05■■□□□ 1.44
COL16A1-215ENST00000488897 MORC1Q86VD1 984 aa24.05■■□□□ 1.44
COL16A1-215ENST00000488897 TRPM3Q9HCF6 1732 aaPredicted RBP24.05■■□□□ 1.44
COL16A1-215ENST00000488897 LRRC59Q96AG4 307 aaKnown RBP24.04■■□□□ 1.44
COL16A1-215ENST00000488897 ANP32AP39687 249 aaKnown RBP24.03■■□□□ 1.44
COL16A1-215ENST00000488897 COG3Q96JB2 828 aa24.03■■□□□ 1.44
COL16A1-215ENST00000488897 SALL2Q9Y467 1007 aaPredicted RBP24.02■■□□□ 1.44
COL16A1-215ENST00000488897 BLMP54132 1417 aaPredicted RBP24.02■■□□□ 1.44
COL16A1-215ENST00000488897 TNS3Q68CZ2 1445 aa24.02■■□□□ 1.44
COL16A1-215ENST00000488897 ADAMTS2O95450 1211 aa24.01■■□□□ 1.43
COL16A1-215ENST00000488897 EXOC6Q8TAG9 804 aa24.01■■□□□ 1.43
COL16A1-215ENST00000488897 COL16A1Q07092 1604 aaPredicted RBP24.01■■□□□ 1.43
COL16A1-215ENST00000488897 CHRNA2Q15822 529 aa24■■□□□ 1.43
COL16A1-215ENST00000488897 EMILIN1Q9Y6C2 1016 aa24■■□□□ 1.43
COL16A1-215ENST00000488897 HAP1P54257 671 aaPredicted RBP24■■□□□ 1.43
COL16A1-215ENST00000488897 TTC21AQ8NDW8 1320 aa23.99■■□□□ 1.43
COL16A1-215ENST00000488897 GCP02774 474 aa23.99■■□□□ 1.43
COL16A1-215ENST00000488897 FBXO41Q8TF61 875 aa23.99■■□□□ 1.43
COL16A1-215ENST00000488897 AHDC1Q5TGY3 1603 aaPredicted RBP23.98■■□□□ 1.43
COL16A1-215ENST00000488897 IPO9Q96P70 1041 aaKnown RBP23.98■■□□□ 1.43
COL16A1-215ENST00000488897 SBNO1A3KN83 1393 aa23.97■■□□□ 1.43
COL16A1-215ENST00000488897 MED1Q15648 1581 aaPredicted RBP23.97■■□□□ 1.43
COL16A1-215ENST00000488897 ALS2Q96Q42 1657 aa23.96■■□□□ 1.43
COL16A1-215ENST00000488897 TCERG1O14776 1098 aaKnown RBP23.96■■□□□ 1.43
COL16A1-215ENST00000488897 BCL11AQ9H165 835 aa23.96■■□□□ 1.43
COL16A1-215ENST00000488897 PNPLA6Q8IY17 1366 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms