RNA–Protein interactions for RNA: ENST00000488600.1

LPGAT1-203, Transcript of lysophosphatidylglycerol acyltransferase 1, humanhuman

TSL 3

Gene LPGAT1, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPGAT1-203ENST00000488600 PLEKHG3A1L390 1219 aa28.96■■■□□ 2.23
LPGAT1-203ENST00000488600 PRDM11Q9NQV5 511 aa28.96■■■□□ 2.23
LPGAT1-203ENST00000488600 TRPM3Q9HCF6 1732 aaPredicted RBP28.96■■■□□ 2.23
LPGAT1-203ENST00000488600 CENPJQ9HC77 1338 aaPredicted RBP28.95■■■□□ 2.23
LPGAT1-203ENST00000488600 SRPK2P78362 688 aaKnown RBP28.95■■■□□ 2.22
LPGAT1-203ENST00000488600 KRT27Q7Z3Y8 459 aa28.95■■■□□ 2.22
LPGAT1-203ENST00000488600 SIN3AQ96ST3 1273 aa28.95■■■□□ 2.22
LPGAT1-203ENST00000488600 ZRANB1Q9UGI0 708 aa28.94■■■□□ 2.22
LPGAT1-203ENST00000488600 FAM98CQ17RN3 349 aaKnown RBP28.93■■■□□ 2.22
LPGAT1-203ENST00000488600 NUTM2GQ5VZR2 741 aa28.93■■■□□ 2.22
LPGAT1-203ENST00000488600 KIAA1210Q9ULL0 1709 aa28.92■■■□□ 2.22
LPGAT1-203ENST00000488600 POLR3AO14802 1390 aaPredicted RBP28.92■■■□□ 2.22
LPGAT1-203ENST00000488600 SF3B2Q13435 895 aaKnown RBP28.92■■■□□ 2.22
LPGAT1-203ENST00000488600 NEUROD1Q13562 356 aa28.92■■■□□ 2.22
LPGAT1-203ENST00000488600 ALS2Q96Q42 1657 aa28.92■■■□□ 2.22
LPGAT1-203ENST00000488600 NWD2Q9ULI1 1742 aa28.91■■■□□ 2.22
LPGAT1-203ENST00000488600 BLMP54132 1417 aaPredicted RBP28.9■■■□□ 2.22
LPGAT1-203ENST00000488600 ABCA3Q99758 1704 aa28.9■■■□□ 2.22
LPGAT1-203ENST00000488600 CABP2Q9NPB3 220 aa28.9■■■□□ 2.22
LPGAT1-203ENST00000488600 PLCH1Q4KWH8 1693 aa28.89■■■□□ 2.22
LPGAT1-203ENST00000488600 ZC3H6P61129 1189 aaKnown RBP28.89■■■□□ 2.22
LPGAT1-203ENST00000488600 ABTB2Q8N961 1025 aa28.89■■■□□ 2.22
LPGAT1-203ENST00000488600 KIAA0232Q92628 1395 aa28.88■■■□□ 2.21
LPGAT1-203ENST00000488600 CHRNA2Q15822 529 aa28.87■■■□□ 2.21
LPGAT1-203ENST00000488600 SPATA31A5Q5VU36 1347 aa28.87■■■□□ 2.21
LPGAT1-203ENST00000488600 SPATA31A7Q8IWB4 1347 aa28.87■■■□□ 2.21
LPGAT1-203ENST00000488600 ITSN1Q15811 1721 aa28.86■■■□□ 2.21
LPGAT1-203ENST00000488600 COL14A1Q05707 1796 aaKnown RBP28.85■■■□□ 2.21
LPGAT1-203ENST00000488600 DEFB132Q7Z7B7 95 aa28.83■■■□□ 2.21
LPGAT1-203ENST00000488600 STRN4Q9NRL3 753 aa28.83■■■□□ 2.21
LPGAT1-203ENST00000488600 PPIP5K1Q6PFW1 1433 aa28.83■■■□□ 2.21
LPGAT1-203ENST00000488600 CABP1Q9NZU7 370 aa28.82■■■□□ 2.2
LPGAT1-203ENST00000488600 SRCAPQ6ZRS2 3230 aa28.81■■■□□ 2.2
LPGAT1-203ENST00000488600 EVA1CP58658 441 aa28.81■■■□□ 2.2
LPGAT1-203ENST00000488600 NLRP13Q86W25 1043 aa28.81■■■□□ 2.2
LPGAT1-203ENST00000488600 EVC2Q86UK5 1308 aa28.78■■■□□ 2.2
LPGAT1-203ENST00000488600 ROCK2O75116 1388 aaKnown RBP28.77■■■□□ 2.2
LPGAT1-203ENST00000488600 SPATA31A1Q5TZJ5 1347 aa28.77■■■□□ 2.2
LPGAT1-203ENST00000488600 NRAPQ86VF7 1730 aa28.77■■■□□ 2.2
LPGAT1-203ENST00000488600 BRWD3Q6RI45 1802 aa28.76■■■□□ 2.19
LPGAT1-203ENST00000488600 BRD4O60885 1362 aaPredicted RBP28.75■■■□□ 2.19
LPGAT1-203ENST00000488600 TOPAZ1Q8N9V7 1692 aa28.75■■■□□ 2.19
LPGAT1-203ENST00000488600 GCP02774 474 aa28.75■■■□□ 2.19
LPGAT1-203ENST00000488600 USP19O94966 1318 aa28.74■■■□□ 2.19
LPGAT1-203ENST00000488600 BAG6P46379 1132 aa28.74■■■□□ 2.19
LPGAT1-203ENST00000488600 FAM182BQ5T319 152 aa28.74■■■□□ 2.19
LPGAT1-203ENST00000488600 USP35Q9P2H5 1018 aa28.74■■■□□ 2.19
LPGAT1-203ENST00000488600 CRYBG1Q9Y4K1 1723 aa28.73■■■□□ 2.19
LPGAT1-203ENST00000488600 NLRP6P59044 892 aa28.72■■■□□ 2.19
LPGAT1-203ENST00000488600 CPDO75976 1380 aa28.71■■■□□ 2.19
LPGAT1-203ENST00000488600 LARP1Q6PKG0 1096 aaKnown RBP28.69■■■□□ 2.18
LPGAT1-203ENST00000488600 USP6P35125 1406 aa28.68■■■□□ 2.18
LPGAT1-203ENST00000488600 ZBTB7CA1YPR0 619 aa28.67■■■□□ 2.18
LPGAT1-203ENST00000488600 BARGINQ6ZT62 677 aa28.67■■■□□ 2.18
LPGAT1-203ENST00000488600 ZNF692Q9BU19 519 aaPredicted RBP28.67■■■□□ 2.18
LPGAT1-203ENST00000488600 PHRF1Q9P1Y6 1649 aaKnown RBP28.67■■■□□ 2.18
LPGAT1-203ENST00000488600 SSH2Q76I76 1423 aa28.67■■■□□ 2.18
LPGAT1-203ENST00000488600 QRICH2Q9H0J4 1663 aa28.67■■■□□ 2.18
LPGAT1-203ENST00000488600 FAM196AQ6ZSG2 479 aa28.65■■■□□ 2.18
LPGAT1-203ENST00000488600 TCP11L2Q8N4U5 519 aa28.65■■■□□ 2.18
LPGAT1-203ENST00000488600 PDE3BQ13370 1112 aa28.64■■■□□ 2.18
LPGAT1-203ENST00000488600 TRPM1Q7Z4N2 1603 aa28.64■■■□□ 2.18
LPGAT1-203ENST00000488600 EN1Q05925 392 aaPredicted RBP28.63■■■□□ 2.17
LPGAT1-203ENST00000488600 CAMTA1Q9Y6Y1 1673 aa28.63■■■□□ 2.17
LPGAT1-203ENST00000488600 NRKQ7Z2Y5 1582 aa28.62■■■□□ 2.17
LPGAT1-203ENST00000488600 CARD11Q9BXL7 1154 aa28.62■■■□□ 2.17
LPGAT1-203ENST00000488600 THRAP3Q9Y2W1 955 aaKnown RBP28.61■■■□□ 2.17
LPGAT1-203ENST00000488600 TTC21BQ7Z4L5 1316 aa28.6■■■□□ 2.17
LPGAT1-203ENST00000488600 THSD7AQ9UPZ6 1657 aa28.59■■■□□ 2.17
LPGAT1-203ENST00000488600 TRIM37O94972 964 aa28.59■■■□□ 2.17
LPGAT1-203ENST00000488600 TONSLQ96HA7 1378 aa28.58■■■□□ 2.17
LPGAT1-203ENST00000488600 AATKQ6ZMQ8 1374 aa28.57■■■□□ 2.16
LPGAT1-203ENST00000488600 KCNH5Q8NCM2 988 aa28.55■■■□□ 2.16
LPGAT1-203ENST00000488600 TTC21AQ8NDW8 1320 aa28.54■■■□□ 2.16
LPGAT1-203ENST00000488600 PSDA5PKW4 1024 aaPredicted RBP28.54■■■□□ 2.16
LPGAT1-203ENST00000488600 COL5A2P05997 1499 aaPredicted RBP28.53■■■□□ 2.16
LPGAT1-203ENST00000488600 APBA3O96018 575 aa28.53■■■□□ 2.16
LPGAT1-203ENST00000488600 KTN1Q86UP2 1357 aaKnown RBP28.52■■■□□ 2.16
LPGAT1-203ENST00000488600 SOX12O15370 315 aa28.52■■■□□ 2.16
LPGAT1-203ENST00000488600 EZH2Q15910 746 aaKnown RBP28.52■■■□□ 2.16
LPGAT1-203ENST00000488600 TOM1L2Q6ZVM7 507 aa28.52■■■□□ 2.16
LPGAT1-203ENST00000488600 LMO7Q8WWI1 1683 aa28.51■■■□□ 2.16
LPGAT1-203ENST00000488600 ARHGEF25Q86VW2 580 aa28.51■■■□□ 2.15
LPGAT1-203ENST00000488600 CRB1P82279 1406 aa28.51■■■□□ 2.15
LPGAT1-203ENST00000488600 SBNO2Q9Y2G9 1366 aa28.5■■■□□ 2.15
LPGAT1-203ENST00000488600 SLIT3O75094 1523 aa28.5■■■□□ 2.15
LPGAT1-203ENST00000488600 TMC1Q8TDI8 760 aa28.5■■■□□ 2.15
LPGAT1-203ENST00000488600 AXIN2Q9Y2T1 843 aa28.5■■■□□ 2.15
LPGAT1-203ENST00000488600 CPSF1Q10570 1443 aaKnown RBP28.5■■■□□ 2.15
LPGAT1-203ENST00000488600 CAMKK2Q96RR4 588 aa28.49■■■□□ 2.15
LPGAT1-203ENST00000488600 DISP2A7MBM2 1401 aa28.49■■■□□ 2.15
LPGAT1-203ENST00000488600 TRIM26Q12899 539 aaPredicted RBP28.47■■■□□ 2.15
LPGAT1-203ENST00000488600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.47■■■□□ 2.15
LPGAT1-203ENST00000488600 C11orf95C9JLR9 678 aaPredicted RBP28.46■■■□□ 2.15
LPGAT1-203ENST00000488600 RGPD1P0DJD0 1748 aa28.46■■■□□ 2.15
LPGAT1-203ENST00000488600 CSB-PGBD3P0DP91 1061 aa28.45■■■□□ 2.14
LPGAT1-203ENST00000488600 R3HDM1Q15032 1099 aaKnown RBP28.45■■■□□ 2.14
LPGAT1-203ENST00000488600 HDGFL2Q7Z4V5 671 aaPredicted RBP28.45■■■□□ 2.14
LPGAT1-203ENST00000488600 WDR17Q8IZU2 1322 aa28.44■■■□□ 2.14
LPGAT1-203ENST00000488600 DDB1Q16531 1140 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms