RNA–Protein interactions for RNA: ENST00000488206.5

TM2D1-208, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-208ENST00000488206 TNS3Q68CZ2 1445 aa21.63■■□□□ 1.05
TM2D1-208ENST00000488206 XPCQ01831 940 aaPredicted RBP21.62■■□□□ 1.05
TM2D1-208ENST00000488206 SSH2Q76I76 1423 aa21.62■■□□□ 1.05
TM2D1-208ENST00000488206 ALS2Q96Q42 1657 aa21.6■■□□□ 1.05
TM2D1-208ENST00000488206 NSD3Q9BZ95 1437 aa21.6■■□□□ 1.05
TM2D1-208ENST00000488206 ARHGEF10O15013 1369 aa21.59■■□□□ 1.05
TM2D1-208ENST00000488206 TTC21AQ8NDW8 1320 aa21.58■■□□□ 1.05
TM2D1-208ENST00000488206 HSPA1LP34931 641 aa21.58■■□□□ 1.05
TM2D1-208ENST00000488206 SPATA31A3Q5VYP0 1347 aa21.57■■□□□ 1.04
TM2D1-208ENST00000488206 LRRC59Q96AG4 307 aaKnown RBP21.57■■□□□ 1.04
TM2D1-208ENST00000488206 PANK3Q9H999 370 aa21.57■■□□□ 1.04
TM2D1-208ENST00000488206 PIK3C2AO00443 1686 aa21.56■■□□□ 1.04
TM2D1-208ENST00000488206 SHPRHQ149N8 1683 aa21.56■■□□□ 1.04
TM2D1-208ENST00000488206 TTC21BQ7Z4L5 1316 aa21.56■■□□□ 1.04
TM2D1-208ENST00000488206 PAK3O75914 559 aaPredicted RBP21.56■■□□□ 1.04
TM2D1-208ENST00000488206 MED1Q15648 1581 aaPredicted RBP21.56■■□□□ 1.04
TM2D1-208ENST00000488206 COL22A1Q8NFW1 1626 aaPredicted RBP21.55■■□□□ 1.04
TM2D1-208ENST00000488206 KIF20BQ96Q89 1820 aa21.55■■□□□ 1.04
TM2D1-208ENST00000488206 USP54Q70EL1 1684 aa21.54■■□□□ 1.04
TM2D1-208ENST00000488206 JCADQ9P266 1359 aa21.54■■□□□ 1.04
TM2D1-208ENST00000488206 PNPLA6Q8IY17 1366 aa21.53■■□□□ 1.04
TM2D1-208ENST00000488206 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.52■■□□□ 1.04
TM2D1-208ENST00000488206 CARD14Q9BXL6 1004 aa21.52■■□□□ 1.04
TM2D1-208ENST00000488206 CGNL1Q0VF96 1302 aa21.52■■□□□ 1.03
TM2D1-208ENST00000488206 LMOD2Q6P5Q4 547 aa21.5■■□□□ 1.03
TM2D1-208ENST00000488206 ABTB2Q8N961 1025 aa21.5■■□□□ 1.03
TM2D1-208ENST00000488206 KNSTRNQ9Y448 316 aa21.5■■□□□ 1.03
TM2D1-208ENST00000488206 NSD2O96028 1365 aa21.49■■□□□ 1.03
TM2D1-208ENST00000488206 ABCA3Q99758 1704 aa21.49■■□□□ 1.03
TM2D1-208ENST00000488206 CRYBG1Q9Y4K1 1723 aa21.49■■□□□ 1.03
TM2D1-208ENST00000488206 USP31Q70CQ4 1352 aa21.48■■□□□ 1.03
TM2D1-208ENST00000488206 PHRF1Q9P1Y6 1649 aaKnown RBP21.48■■□□□ 1.03
TM2D1-208ENST00000488206 OVOS2A0A0J9YW53 1432 aa21.48■■□□□ 1.03
TM2D1-208ENST00000488206 OVOS2Q6IE36 1432 aa21.48■■□□□ 1.03
TM2D1-208ENST00000488206 NME9Q86XW9 330 aa21.48■■□□□ 1.03
TM2D1-208ENST00000488206 ANKRD26Q9UPS8 1709 aa21.48■■□□□ 1.03
TM2D1-208ENST00000488206 MARF1Q9Y4F3 1742 aaKnown RBP21.48■■□□□ 1.03
TM2D1-208ENST00000488206 DDX10Q13206 875 aaKnown RBP21.47■■□□□ 1.03
TM2D1-208ENST00000488206 SLIT3O75094 1523 aa21.46■■□□□ 1.03
TM2D1-208ENST00000488206 NLRP13Q86W25 1043 aa21.46■■□□□ 1.03
TM2D1-208ENST00000488206 USP19O94966 1318 aa21.46■■□□□ 1.03
TM2D1-208ENST00000488206 NLRP6P59044 892 aa21.45■■□□□ 1.02
TM2D1-208ENST00000488206 PER1O15534 1290 aaPredicted RBP21.44■■□□□ 1.02
TM2D1-208ENST00000488206 SPATA31A6Q5VVP1 1343 aa21.44■■□□□ 1.02
TM2D1-208ENST00000488206 NPC1L1Q9UHC9 1359 aa21.44■■□□□ 1.02
TM2D1-208ENST00000488206 FYB1O15117 783 aa21.43■■□□□ 1.02
TM2D1-208ENST00000488206 NUTM2GQ5VZR2 741 aa21.43■■□□□ 1.02
TM2D1-208ENST00000488206 COG3Q96JB2 828 aa21.43■■□□□ 1.02
TM2D1-208ENST00000488206 AMER1Q5JTC6 1135 aaPredicted RBP21.42■■□□□ 1.02
TM2D1-208ENST00000488206 GGNBP2Q9H3C7 697 aa21.41■■□□□ 1.02
TM2D1-208ENST00000488206 ILDR1Q86SU0 546 aaPredicted RBP21.4■■□□□ 1.02
TM2D1-208ENST00000488206 ZRANB1Q9UGI0 708 aa21.4■■□□□ 1.02
TM2D1-208ENST00000488206 NFAT5O94916 1531 aa21.39■■□□□ 1.02
TM2D1-208ENST00000488206 HAP1P54257 671 aaPredicted RBP21.39■■□□□ 1.01
TM2D1-208ENST00000488206 PLEKHG5O94827 1062 aa21.37■■□□□ 1.01
TM2D1-208ENST00000488206 KCNH5Q8NCM2 988 aa21.37■■□□□ 1.01
TM2D1-208ENST00000488206 CABLES1Q8TDN4 633 aa21.37■■□□□ 1.01
TM2D1-208ENST00000488206 LRP6O75581 1613 aa21.37■■□□□ 1.01
TM2D1-208ENST00000488206 CC2D1BQ5T0F9 858 aaKnown RBP21.35■■□□□ 1.01
TM2D1-208ENST00000488206 GCP02774 474 aa21.34■■□□□ 1.01
TM2D1-208ENST00000488206 CPDO75976 1380 aa21.34■■□□□ 1.01
TM2D1-208ENST00000488206 NUTM2BA6NNL0 878 aaPredicted RBP21.33■■□□□ 1.01
TM2D1-208ENST00000488206 NUTM2EB1AL46 878 aaPredicted RBP21.33■■□□□ 1.01
TM2D1-208ENST00000488206 MORC1Q86VD1 984 aa21.33■■□□□ 1.01
TM2D1-208ENST00000488206 NUTM2AQ8IVF1 878 aaPredicted RBP21.33■■□□□ 1.01
TM2D1-208ENST00000488206 ABCC6O95255 1503 aa21.33■■□□□ 1
TM2D1-208ENST00000488206 AATKQ6ZMQ8 1374 aa21.32■■□□□ 1
TM2D1-208ENST00000488206 SOX12O15370 315 aa21.31■■□□□ 1
TM2D1-208ENST00000488206 LTN1O94822 1766 aa21.31■■□□□ 1
TM2D1-208ENST00000488206 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
TM2D1-208ENST00000488206 KIAA0232Q92628 1395 aa21.3■■□□□ 1
TM2D1-208ENST00000488206 PARD3Q8TEW0 1356 aa21.29■■□□□ 1
TM2D1-208ENST00000488206 ADAMTS2O95450 1211 aa21.28■■□□□ 1
TM2D1-208ENST00000488206 MEX3CQ5U5Q3 659 aaKnown RBP21.28■■□□□ 1
TM2D1-208ENST00000488206 PRDM11Q9NQV5 511 aa21.28■■□□□ 1
TM2D1-208ENST00000488206 SMG6Q86US8 1419 aaKnown RBP21.28■■□□□ 1
TM2D1-208ENST00000488206 RTL1A6NKG5 1358 aa21.27■■□□□ 1
TM2D1-208ENST00000488206 ZC3H6P61129 1189 aaKnown RBP21.27■■□□□ 1
TM2D1-208ENST00000488206 CNGB1Q14028 1251 aaPredicted RBP21.27■■□□□ 1
TM2D1-208ENST00000488206 PLCH1Q4KWH8 1693 aa21.27■■□□□ 1
TM2D1-208ENST00000488206 LMO7Q8WWI1 1683 aa21.27■■□□□ 1
TM2D1-208ENST00000488206 KIF24Q5T7B8 1368 aa21.26■□□□□ 0.99
TM2D1-208ENST00000488206 ARHGEF25Q86VW2 580 aa21.26■□□□□ 0.99
TM2D1-208ENST00000488206 TNNT2P45379 298 aaPredicted RBP21.25■□□□□ 0.99
TM2D1-208ENST00000488206 RALBP1Q15311 655 aa21.25■□□□□ 0.99
TM2D1-208ENST00000488206 MAP3K19Q56UN5 1328 aa21.25■□□□□ 0.99
TM2D1-208ENST00000488206 NWD2Q9ULI1 1742 aa21.24■□□□□ 0.99
TM2D1-208ENST00000488206 ZBTB7CA1YPR0 619 aa21.24■□□□□ 0.99
TM2D1-208ENST00000488206 PEAK1Q9H792 1746 aa21.24■□□□□ 0.99
TM2D1-208ENST00000488206 COL18A1P39060 1754 aa21.23■□□□□ 0.99
TM2D1-208ENST00000488206 RRS1Q15050 365 aaKnown RBP21.23■□□□□ 0.99
TM2D1-208ENST00000488206 FLT4P35916 1363 aa21.23■□□□□ 0.99
TM2D1-208ENST00000488206 BLMP54132 1417 aaPredicted RBP21.22■□□□□ 0.99
TM2D1-208ENST00000488206 CDK12Q9NYV4 1490 aaPredicted RBP21.22■□□□□ 0.99
TM2D1-208ENST00000488206 C8orf37Q96NL8 207 aa21.22■□□□□ 0.99
TM2D1-208ENST00000488206 SLIT2O94813 1529 aa21.22■□□□□ 0.99
TM2D1-208ENST00000488206 MAP2P11137 1827 aaKnown RBP21.22■□□□□ 0.99
TM2D1-208ENST00000488206 CHRNA2Q15822 529 aa21.21■□□□□ 0.99
TM2D1-208ENST00000488206 NRAPQ86VF7 1730 aa21.21■□□□□ 0.99
TM2D1-208ENST00000488206 FAM83GA6ND36 823 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms