RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ABL2P42684 1182 aa7.77□□□□□ -1.17
ECHDC1-217ENST00000488087 KCNH2Q12809 1159 aa7.77□□□□□ -1.17
ECHDC1-217ENST00000488087 PPP1R18Q6NYC8 613 aa7.77□□□□□ -1.17
ECHDC1-217ENST00000488087 TRIM34Q9BYJ4 488 aa7.77□□□□□ -1.17
ECHDC1-217ENST00000488087 COG6Q9Y2V7 657 aa7.77□□□□□ -1.17
ECHDC1-217ENST00000488087 RNF223E7ERA6 249 aa7.76□□□□□ -1.17
ECHDC1-217ENST00000488087 WWC1Q8IX03 1113 aa7.76□□□□□ -1.17
ECHDC1-217ENST00000488087 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-217ENST00000488087 PRKD2Q9BZL6 878 aa7.75□□□□□ -1.17
ECHDC1-217ENST00000488087 A6NJR5 290 aa7.74□□□□□ -1.17
ECHDC1-217ENST00000488087 ZBTB24O43167 697 aaPredicted RBP7.74□□□□□ -1.17
ECHDC1-217ENST00000488087 PROSER2Q86WR7 435 aaPredicted RBP7.74□□□□□ -1.17
ECHDC1-217ENST00000488087 ANKLE1Q8NAG6 615 aa7.74□□□□□ -1.17
ECHDC1-217ENST00000488087 UNC93B1Q9H1C4 597 aa7.74□□□□□ -1.17
ECHDC1-217ENST00000488087 PTCRAQ6ISU1 281 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-217ENST00000488087 ARMC2Q8NEN0 867 aa7.73□□□□□ -1.17
ECHDC1-217ENST00000488087 ZNF775Q96BV0 537 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-217ENST00000488087 FKBPLQ9UIM3 349 aa7.73□□□□□ -1.17
ECHDC1-217ENST00000488087 V9GY48 417 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-217ENST00000488087 NBPF14Q5TI25 921 aa7.71□□□□□ -1.18
ECHDC1-217ENST00000488087 ZNF330Q9Y3S2 320 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-217ENST00000488087 SUPT5HO00267 1087 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-217ENST00000488087 TRAK2O60296 914 aa7.69□□□□□ -1.18
ECHDC1-217ENST00000488087 LINC01559Q495D7 138 aa7.69□□□□□ -1.18
ECHDC1-217ENST00000488087 PLA2G2CQ5R387 149 aa7.69□□□□□ -1.18
ECHDC1-217ENST00000488087 ZC3H4Q9UPT8 1303 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-217ENST00000488087 IRF5Q13568 498 aa7.68□□□□□ -1.18
ECHDC1-217ENST00000488087 AGERQ15109 404 aa7.68□□□□□ -1.18
ECHDC1-217ENST00000488087 WASHC4Q2M389 1173 aa7.68□□□□□ -1.18
ECHDC1-217ENST00000488087 BAP1Q92560 729 aa7.68□□□□□ -1.18
ECHDC1-217ENST00000488087 GPKOWQ92917 476 aaPredicted RBP eCLIP7.68□□□□□ -1.18
ECHDC1-217ENST00000488087 PDZRN3Q9UPQ7 1066 aa7.68□□□□□ -1.18
ECHDC1-217ENST00000488087 GPR37L1O60883 481 aa7.67□□□□□ -1.18
ECHDC1-217ENST00000488087 PTK2Q05397 1052 aa7.67□□□□□ -1.18
ECHDC1-217ENST00000488087 VAC14Q08AM6 782 aa7.67□□□□□ -1.18
ECHDC1-217ENST00000488087 TRIM32Q13049 653 aa7.67□□□□□ -1.18
ECHDC1-217ENST00000488087 FNBP4Q8N3X1 1017 aaPredicted RBP7.67□□□□□ -1.18
ECHDC1-217ENST00000488087 ZBBXA8MT70 800 aa7.66□□□□□ -1.18
ECHDC1-217ENST00000488087 CD2BP2O95400 341 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-217ENST00000488087 PDXDC2PQ6P474 469 aa7.66□□□□□ -1.18
ECHDC1-217ENST00000488087 ZNF511Q8NB15 262 aa7.66□□□□□ -1.18
ECHDC1-217ENST00000488087 ZNF777Q9ULD5 760 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-217ENST00000488087 MAGEB6P1A0A0J9YX57 407 aa7.65□□□□□ -1.18
ECHDC1-217ENST00000488087 LOC100996750A0A140TA64 210 aa7.65□□□□□ -1.18
ECHDC1-217ENST00000488087 FBXO45P0C2W1 286 aa7.65□□□□□ -1.18
ECHDC1-217ENST00000488087 RPIAP49247 311 aa7.65□□□□□ -1.18
ECHDC1-217ENST00000488087 ARHGAP9Q9BRR9 750 aa7.65□□□□□ -1.18
ECHDC1-217ENST00000488087 CARD14Q9BXL6 1004 aa7.65□□□□□ -1.18
ECHDC1-217ENST00000488087 KRTAP4-6Q9BYQ5 205 aa7.65□□□□□ -1.18
ECHDC1-217ENST00000488087 ARID3CA6NKF2 412 aa7.64□□□□□ -1.19
ECHDC1-217ENST00000488087 SLC19A1P41440 591 aa7.64□□□□□ -1.19
ECHDC1-217ENST00000488087 NR1H3Q13133 447 aa7.64□□□□□ -1.19
ECHDC1-217ENST00000488087 ZBTB33Q86T24 672 aa7.64□□□□□ -1.19
ECHDC1-217ENST00000488087 BPHLQ86WA6 291 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-217ENST00000488087 GPSM3Q9Y4H4 160 aa7.64□□□□□ -1.19
ECHDC1-217ENST00000488087 POM121CA8CG34 1229 aa7.63□□□□□ -1.19
ECHDC1-217ENST00000488087 EIF4G2P78344 907 aaKnown RBP eCLIP7.63□□□□□ -1.19
ECHDC1-217ENST00000488087 LIAT1Q6ZQX7 453 aa7.63□□□□□ -1.19
ECHDC1-217ENST00000488087 FOXJ1Q92949 421 aa7.63□□□□□ -1.19
ECHDC1-217ENST00000488087 WNT7BP56706 349 aa7.62□□□□□ -1.19
ECHDC1-217ENST00000488087 SH3BP2P78314 561 aa7.62□□□□□ -1.19
ECHDC1-217ENST00000488087 SH3BP5LQ7L8J4 393 aa7.62□□□□□ -1.19
ECHDC1-217ENST00000488087 ADAM32Q8TC27 787 aa7.61□□□□□ -1.19
ECHDC1-217ENST00000488087 SKOR1P84550 965 aa7.6□□□□□ -1.19
ECHDC1-217ENST00000488087 SEMA3FQ13275 785 aa7.6□□□□□ -1.19
ECHDC1-217ENST00000488087 SH3RF1Q7Z6J0 888 aa7.6□□□□□ -1.19
ECHDC1-217ENST00000488087 EHBP1Q8NDI1 1231 aa7.6□□□□□ -1.19
ECHDC1-217ENST00000488087 EMID1Q96A84 441 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-217ENST00000488087 CALR3Q96L12 384 aaKnown RBP7.6□□□□□ -1.19
ECHDC1-217ENST00000488087 PCDHB9Q9Y5E1 797 aa7.6□□□□□ -1.19
ECHDC1-217ENST00000488087 SOX11P35716 441 aa7.59□□□□□ -1.19
ECHDC1-217ENST00000488087 HDGFL1Q5TGJ6 251 aa7.59□□□□□ -1.19
ECHDC1-217ENST00000488087 DZIP3Q86Y13 1208 aaKnown RBP7.59□□□□□ -1.19
ECHDC1-217ENST00000488087 ZNF592Q92610 1267 aa7.59□□□□□ -1.19
ECHDC1-217ENST00000488087 GLMNQ92990 594 aa7.59□□□□□ -1.19
ECHDC1-217ENST00000488087 OCSTAMPQ9BR26 566 aa7.59□□□□□ -1.19
ECHDC1-217ENST00000488087 VARSP26640 1264 aaKnown RBP7.58□□□□□ -1.2
ECHDC1-217ENST00000488087 C4orf48Q5BLP8 95 aa7.58□□□□□ -1.2
ECHDC1-217ENST00000488087 RC3H1Q5TC82 1133 aaKnown RBP7.58□□□□□ -1.2
ECHDC1-217ENST00000488087 ZNF697Q5TEC3 545 aa7.58□□□□□ -1.2
ECHDC1-217ENST00000488087 SPRYD7Q5W111 196 aa7.58□□□□□ -1.2
ECHDC1-217ENST00000488087 SLC10A4Q96EP9 437 aa7.58□□□□□ -1.2
ECHDC1-217ENST00000488087 ERFEQ4G0M1 354 aa7.57□□□□□ -1.2
ECHDC1-217ENST00000488087 FAM174AQ8TBP5 190 aa7.57□□□□□ -1.2
ECHDC1-217ENST00000488087 FOXC1Q12948 553 aa7.56□□□□□ -1.2
ECHDC1-217ENST00000488087 ZNF598Q86UK7 904 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-217ENST00000488087 CCDC97Q96F63 343 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-217ENST00000488087 ALG2Q9H553 416 aa7.56□□□□□ -1.2
ECHDC1-217ENST00000488087 C1orf115Q9H7X2 142 aa7.56□□□□□ -1.2
ECHDC1-217ENST00000488087 MCCD1P59942 119 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-217ENST00000488087 ARID5BQ14865 1188 aa7.55□□□□□ -1.2
ECHDC1-217ENST00000488087 PKDCCQ504Y2 493 aa7.55□□□□□ -1.2
ECHDC1-217ENST00000488087 ADAMTS19Q8TE59 1207 aa7.55□□□□□ -1.2
ECHDC1-217ENST00000488087 ARID3AQ99856 593 aa7.55□□□□□ -1.2
ECHDC1-217ENST00000488087 WNT7AO00755 349 aa7.54□□□□□ -1.2
ECHDC1-217ENST00000488087 CCDC82Q8N4S0 544 aa7.54□□□□□ -1.2
ECHDC1-217ENST00000488087 MRGPRX2Q96LB1 330 aa7.54□□□□□ -1.2
ECHDC1-217ENST00000488087 C1QTNF2Q9BXJ5 285 aa7.54□□□□□ -1.2
ECHDC1-217ENST00000488087 NBPF20Q3BBV1 942 aa7.53□□□□□ -1.2
ECHDC1-217ENST00000488087 SLFNL1Q499Z3 407 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms