RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 LMOD2Q6P5Q4 547 aa24.16■■□□□ 1.46
HMG20B-212ENST00000487894 NWD2Q9ULI1 1742 aa24.15■■□□□ 1.46
HMG20B-212ENST00000487894 CABLES1Q8TDN4 633 aa24.14■■□□□ 1.45
HMG20B-212ENST00000487894 NGLY1Q96IV0 654 aa24.13■■□□□ 1.45
HMG20B-212ENST00000487894 ATAD2Q6PL18 1390 aa24.13■■□□□ 1.45
HMG20B-212ENST00000487894 PAK3O75914 559 aaPredicted RBP24.12■■□□□ 1.45
HMG20B-212ENST00000487894 USP47Q96K76 1375 aa24.12■■□□□ 1.45
HMG20B-212ENST00000487894 PIK3C2AO00443 1686 aa24.11■■□□□ 1.45
HMG20B-212ENST00000487894 USP6P35125 1406 aa24.11■■□□□ 1.45
HMG20B-212ENST00000487894 CABP1Q9NZU7 370 aa24.11■■□□□ 1.45
HMG20B-212ENST00000487894 SLIT2O94813 1529 aa24.1■■□□□ 1.45
HMG20B-212ENST00000487894 NRAPQ86VF7 1730 aa24.1■■□□□ 1.45
HMG20B-212ENST00000487894 PLEKHG5O94827 1062 aa24.1■■□□□ 1.45
HMG20B-212ENST00000487894 FNBP4Q8N3X1 1017 aaPredicted RBP24.1■■□□□ 1.45
HMG20B-212ENST00000487894 COL14A1Q05707 1796 aaKnown RBP24.1■■□□□ 1.45
HMG20B-212ENST00000487894 BCL9LQ86UU0 1499 aa24.09■■□□□ 1.45
HMG20B-212ENST00000487894 ST20-MTHFSA0A0A6YYL1 179 aa24.09■■□□□ 1.45
HMG20B-212ENST00000487894 TESK2Q96S53 571 aa24.09■■□□□ 1.45
HMG20B-212ENST00000487894 BRD4O60885 1362 aaPredicted RBP24.08■■□□□ 1.45
HMG20B-212ENST00000487894 HAP1P54257 671 aaPredicted RBP24.08■■□□□ 1.45
HMG20B-212ENST00000487894 USP21Q9UK80 565 aa24.07■■□□□ 1.44
HMG20B-212ENST00000487894 ATRNO75882 1429 aa24.07■■□□□ 1.44
HMG20B-212ENST00000487894 SSH2Q76I76 1423 aa24.07■■□□□ 1.44
HMG20B-212ENST00000487894 CPSF1Q10570 1443 aaKnown RBP24.06■■□□□ 1.44
HMG20B-212ENST00000487894 CD163L1Q9NR16 1453 aa24.06■■□□□ 1.44
HMG20B-212ENST00000487894 CDK12Q9NYV4 1490 aaPredicted RBP24.06■■□□□ 1.44
HMG20B-212ENST00000487894 USP54Q70EL1 1684 aa24.03■■□□□ 1.44
HMG20B-212ENST00000487894 QTRT2Q9H974 415 aaKnown RBP24.03■■□□□ 1.44
HMG20B-212ENST00000487894 RXRBP28702 533 aa24.02■■□□□ 1.44
HMG20B-212ENST00000487894 SLIT3O75094 1523 aa24.01■■□□□ 1.43
HMG20B-212ENST00000487894 GLI3P10071 1580 aa24.01■■□□□ 1.43
HMG20B-212ENST00000487894 NUTM2GQ5VZR2 741 aa24.01■■□□□ 1.43
HMG20B-212ENST00000487894 USP19O94966 1318 aa24.01■■□□□ 1.43
HMG20B-212ENST00000487894 RGS12O14924 1447 aa24.01■■□□□ 1.43
HMG20B-212ENST00000487894 MYOM1P52179 1685 aa24■■□□□ 1.43
HMG20B-212ENST00000487894 ABTB2Q8N961 1025 aa24■■□□□ 1.43
HMG20B-212ENST00000487894 PUS7Q96PZ0 661 aaKnown RBP24■■□□□ 1.43
HMG20B-212ENST00000487894 TRPC5Q9UL62 973 aaPredicted RBP24■■□□□ 1.43
HMG20B-212ENST00000487894 RBM6P78332 1123 aaKnown RBP23.99■■□□□ 1.43
HMG20B-212ENST00000487894 KTN1Q86UP2 1357 aaKnown RBP23.99■■□□□ 1.43
HMG20B-212ENST00000487894 LMO7Q8WWI1 1683 aa23.98■■□□□ 1.43
HMG20B-212ENST00000487894 FAM83GA6ND36 823 aa23.97■■□□□ 1.43
HMG20B-212ENST00000487894 SLC24A1O60721 1099 aa23.97■■□□□ 1.43
HMG20B-212ENST00000487894 UNC5CLQ8IV45 518 aa23.97■■□□□ 1.43
HMG20B-212ENST00000487894 ZNF692Q9BU19 519 aaPredicted RBP23.97■■□□□ 1.43
HMG20B-212ENST00000487894 KIAA0232Q92628 1395 aa23.95■■□□□ 1.42
HMG20B-212ENST00000487894 NINLQ9Y2I6 1382 aa23.95■■□□□ 1.42
HMG20B-212ENST00000487894 TTC21BQ7Z4L5 1316 aa23.95■■□□□ 1.42
HMG20B-212ENST00000487894 A0A1W2PP64 1363 aa23.94■■□□□ 1.42
HMG20B-212ENST00000487894 NLRP13Q86W25 1043 aa23.94■■□□□ 1.42
HMG20B-212ENST00000487894 TMC1Q8TDI8 760 aa23.94■■□□□ 1.42
HMG20B-212ENST00000487894 SLC12A5Q9H2X9 1139 aa23.94■■□□□ 1.42
HMG20B-212ENST00000487894 TTC21AQ8NDW8 1320 aa23.93■■□□□ 1.42
HMG20B-212ENST00000487894 TMF1P82094 1093 aa23.93■■□□□ 1.42
HMG20B-212ENST00000487894 BRWD3Q6RI45 1802 aa23.92■■□□□ 1.42
HMG20B-212ENST00000487894 EDC4Q6P2E9 1401 aaKnown RBP23.92■■□□□ 1.42
HMG20B-212ENST00000487894 CPDO75976 1380 aa23.91■■□□□ 1.42
HMG20B-212ENST00000487894 COL18A1P39060 1754 aa23.91■■□□□ 1.42
HMG20B-212ENST00000487894 PRDM11Q9NQV5 511 aa23.91■■□□□ 1.42
HMG20B-212ENST00000487894 NLRP6P59044 892 aa23.9■■□□□ 1.42
HMG20B-212ENST00000487894 ZC3H6P61129 1189 aaKnown RBP23.9■■□□□ 1.42
HMG20B-212ENST00000487894 GJD4Q96KN9 370 aaPredicted RBP23.9■■□□□ 1.42
HMG20B-212ENST00000487894 BTG4Q9NY30 223 aa23.9■■□□□ 1.42
HMG20B-212ENST00000487894 NFAT5O94916 1531 aa23.89■■□□□ 1.42
HMG20B-212ENST00000487894 RGPD5Q99666 1765 aa23.89■■□□□ 1.42
HMG20B-212ENST00000487894 HDGFL2Q7Z4V5 671 aaPredicted RBP23.89■■□□□ 1.41
HMG20B-212ENST00000487894 LTN1O94822 1766 aa23.88■■□□□ 1.41
HMG20B-212ENST00000487894 GCP02774 474 aa23.88■■□□□ 1.41
HMG20B-212ENST00000487894 VPS72Q15906 364 aa23.88■■□□□ 1.41
HMG20B-212ENST00000487894 CAMTA1Q9Y6Y1 1673 aa23.88■■□□□ 1.41
HMG20B-212ENST00000487894 KIF20BQ96Q89 1820 aa23.87■■□□□ 1.41
HMG20B-212ENST00000487894 CHRNA2Q15822 529 aa23.87■■□□□ 1.41
HMG20B-212ENST00000487894 TERF2IPQ9NYB0 399 aa23.87■■□□□ 1.41
HMG20B-212ENST00000487894 ANKRD36BQ8N2N9 1353 aa23.86■■□□□ 1.41
HMG20B-212ENST00000487894 USP31Q70CQ4 1352 aa23.85■■□□□ 1.41
HMG20B-212ENST00000487894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.84■■□□□ 1.41
HMG20B-212ENST00000487894 HSPA5P11021 654 aaKnown RBP23.83■■□□□ 1.41
HMG20B-212ENST00000487894 EIF4G2P78344 907 aaKnown RBP eCLIP23.83■■□□□ 1.41
HMG20B-212ENST00000487894 CDCA8Q53HL2 280 aa23.83■■□□□ 1.41
HMG20B-212ENST00000487894 OVOS2A0A0J9YW53 1432 aa23.83■■□□□ 1.4
HMG20B-212ENST00000487894 OVOS2Q6IE36 1432 aa23.83■■□□□ 1.4
HMG20B-212ENST00000487894 THSD7AQ9UPZ6 1657 aa23.83■■□□□ 1.4
HMG20B-212ENST00000487894 NME9Q86XW9 330 aa23.82■■□□□ 1.4
HMG20B-212ENST00000487894 ZRANB1Q9UGI0 708 aa23.82■■□□□ 1.4
HMG20B-212ENST00000487894 EP400Q96L91 3159 aa23.81■■□□□ 1.4
HMG20B-212ENST00000487894 COL5A2P05997 1499 aaPredicted RBP23.81■■□□□ 1.4
HMG20B-212ENST00000487894 ABCC6O95255 1503 aa23.8■■□□□ 1.4
HMG20B-212ENST00000487894 CCDC9Q9Y3X0 531 aaKnown RBP23.8■■□□□ 1.4
HMG20B-212ENST00000487894 WNK3Q9BYP7 1800 aa23.8■■□□□ 1.4
HMG20B-212ENST00000487894 AATKQ6ZMQ8 1374 aa23.78■■□□□ 1.4
HMG20B-212ENST00000487894 KCNH5Q8NCM2 988 aa23.78■■□□□ 1.4
HMG20B-212ENST00000487894 SPATA31A5Q5VU36 1347 aa23.78■■□□□ 1.4
HMG20B-212ENST00000487894 SPATA31A7Q8IWB4 1347 aa23.78■■□□□ 1.4
HMG20B-212ENST00000487894 STRN4Q9NRL3 753 aa23.76■■□□□ 1.39
HMG20B-212ENST00000487894 ZBTB7CA1YPR0 619 aa23.75■■□□□ 1.39
HMG20B-212ENST00000487894 SOX12O15370 315 aa23.75■■□□□ 1.39
HMG20B-212ENST00000487894 ARHGEF25Q86VW2 580 aa23.75■■□□□ 1.39
HMG20B-212ENST00000487894 ONECUT3O60422 494 aaPredicted RBP23.74■■□□□ 1.39
HMG20B-212ENST00000487894 SPATA31A1Q5TZJ5 1347 aa23.74■■□□□ 1.39
HMG20B-212ENST00000487894 SEPT12Q8IYM1 358 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms