RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 PAK3O75914 559 aaPredicted RBP17.19■□□□□ 0.34
SFXN3-206ENST00000487721 ATP7BP35670 1465 aa17.18■□□□□ 0.34
SFXN3-206ENST00000487721 SLIT2O94813 1529 aa17.18■□□□□ 0.34
SFXN3-206ENST00000487721 TNS3Q68CZ2 1445 aa17.17■□□□□ 0.34
SFXN3-206ENST00000487721 ACEP12821 1306 aa17.17■□□□□ 0.34
SFXN3-206ENST00000487721 SBNO2Q9Y2G9 1366 aa17.16■□□□□ 0.34
SFXN3-206ENST00000487721 VPS72Q15906 364 aa17.16■□□□□ 0.34
SFXN3-206ENST00000487721 SEPT12Q8IYM1 358 aa17.16■□□□□ 0.34
SFXN3-206ENST00000487721 CABP1Q9NZU7 370 aa17.16■□□□□ 0.34
SFXN3-206ENST00000487721 PPIP5K1Q6PFW1 1433 aa17.15■□□□□ 0.34
SFXN3-206ENST00000487721 ST20-MTHFSA0A0A6YYL1 179 aa17.15■□□□□ 0.34
SFXN3-206ENST00000487721 FAM83GA6ND36 823 aa17.15■□□□□ 0.34
SFXN3-206ENST00000487721 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
SFXN3-206ENST00000487721 USP32Q8NFA0 1604 aa17.14■□□□□ 0.33
SFXN3-206ENST00000487721 ONECUT3O60422 494 aaPredicted RBP17.14■□□□□ 0.33
SFXN3-206ENST00000487721 POLR3AO14802 1390 aaPredicted RBP17.14■□□□□ 0.33
SFXN3-206ENST00000487721 MARF1Q9Y4F3 1742 aaKnown RBP17.13■□□□□ 0.33
SFXN3-206ENST00000487721 ZNF692Q9BU19 519 aaPredicted RBP17.12■□□□□ 0.33
SFXN3-206ENST00000487721 QRICH2Q9H0J4 1663 aa17.12■□□□□ 0.33
SFXN3-206ENST00000487721 SF3B2Q13435 895 aaKnown RBP17.11■□□□□ 0.33
SFXN3-206ENST00000487721 PUS7Q96PZ0 661 aaKnown RBP17.11■□□□□ 0.33
SFXN3-206ENST00000487721 BRD4O60885 1362 aaPredicted RBP17.11■□□□□ 0.33
SFXN3-206ENST00000487721 USP47Q96K76 1375 aa17.11■□□□□ 0.33
SFXN3-206ENST00000487721 GLI3P10071 1580 aa17.11■□□□□ 0.33
SFXN3-206ENST00000487721 DEFB132Q7Z7B7 95 aa17.1■□□□□ 0.33
SFXN3-206ENST00000487721 TMC1Q8TDI8 760 aa17.1■□□□□ 0.33
SFXN3-206ENST00000487721 BLMP54132 1417 aaPredicted RBP17.1■□□□□ 0.33
SFXN3-206ENST00000487721 TMF1P82094 1093 aa17.09■□□□□ 0.33
SFXN3-206ENST00000487721 CDCA8Q53HL2 280 aa17.09■□□□□ 0.33
SFXN3-206ENST00000487721 KRT27Q7Z3Y8 459 aa17.09■□□□□ 0.33
SFXN3-206ENST00000487721 ABTB2Q8N961 1025 aa17.09■□□□□ 0.33
SFXN3-206ENST00000487721 ITSN1Q15811 1721 aa17.09■□□□□ 0.33
SFXN3-206ENST00000487721 RGPD8O14715 1765 aaPredicted RBP17.09■□□□□ 0.33
SFXN3-206ENST00000487721 EP400Q96L91 3159 aa17.08■□□□□ 0.33
SFXN3-206ENST00000487721 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.08■□□□□ 0.32
SFXN3-206ENST00000487721 BTG4Q9NY30 223 aa17.08■□□□□ 0.32
SFXN3-206ENST00000487721 SRCAPQ6ZRS2 3230 aa17.08■□□□□ 0.32
SFXN3-206ENST00000487721 HDGFL2Q7Z4V5 671 aaPredicted RBP17.07■□□□□ 0.32
SFXN3-206ENST00000487721 TESK2Q96S53 571 aa17.07■□□□□ 0.32
SFXN3-206ENST00000487721 A0A0G2JS52 829 aa17.06■□□□□ 0.32
SFXN3-206ENST00000487721 MYT1Q01538 1121 aa17.06■□□□□ 0.32
SFXN3-206ENST00000487721 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
SFXN3-206ENST00000487721 TERF2IPQ9NYB0 399 aa17.06■□□□□ 0.32
SFXN3-206ENST00000487721 FAM98CQ17RN3 349 aaKnown RBP17.05■□□□□ 0.32
SFXN3-206ENST00000487721 EIF4G2P78344 907 aaKnown RBP eCLIP17.04■□□□□ 0.32
SFXN3-206ENST00000487721 NUTM2GQ5VZR2 741 aa17.04■□□□□ 0.32
SFXN3-206ENST00000487721 USP6P35125 1406 aa17.03■□□□□ 0.32
SFXN3-206ENST00000487721 KTN1Q86UP2 1357 aaKnown RBP17.02■□□□□ 0.32
SFXN3-206ENST00000487721 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.32
SFXN3-206ENST00000487721 TOPAZ1Q8N9V7 1692 aa17.02■□□□□ 0.32
SFXN3-206ENST00000487721 NLRP6P59044 892 aa17.02■□□□□ 0.32
SFXN3-206ENST00000487721 TTC21AQ8NDW8 1320 aa17.01■□□□□ 0.31
SFXN3-206ENST00000487721 SLC12A5Q9H2X9 1139 aa17.01■□□□□ 0.31
SFXN3-206ENST00000487721 PRDM11Q9NQV5 511 aa17.01■□□□□ 0.31
SFXN3-206ENST00000487721 TTC21BQ7Z4L5 1316 aa17■□□□□ 0.31
SFXN3-206ENST00000487721 SPATA31A5Q5VU36 1347 aa16.99■□□□□ 0.31
SFXN3-206ENST00000487721 SPATA31A7Q8IWB4 1347 aa16.99■□□□□ 0.31
SFXN3-206ENST00000487721 TRPM3Q9HCF6 1732 aaPredicted RBP16.99■□□□□ 0.31
SFXN3-206ENST00000487721 NWD2Q9ULI1 1742 aa16.99■□□□□ 0.31
SFXN3-206ENST00000487721 CPSF1Q10570 1443 aaKnown RBP16.99■□□□□ 0.31
SFXN3-206ENST00000487721 BRWD3Q6RI45 1802 aa16.99■□□□□ 0.31
SFXN3-206ENST00000487721 BAG6P46379 1132 aa16.99■□□□□ 0.31
SFXN3-206ENST00000487721 PLCH1Q4KWH8 1693 aa16.98■□□□□ 0.31
SFXN3-206ENST00000487721 ZC3H6P61129 1189 aaKnown RBP16.98■□□□□ 0.31
SFXN3-206ENST00000487721 GCP02774 474 aa16.97■□□□□ 0.31
SFXN3-206ENST00000487721 FAM182BQ5T319 152 aa16.97■□□□□ 0.31
SFXN3-206ENST00000487721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.97■□□□□ 0.31
SFXN3-206ENST00000487721 USP19O94966 1318 aa16.96■□□□□ 0.31
SFXN3-206ENST00000487721 KCNH5Q8NCM2 988 aa16.96■□□□□ 0.31
SFXN3-206ENST00000487721 ALS2Q96Q42 1657 aa16.96■□□□□ 0.31
SFXN3-206ENST00000487721 SSH2Q76I76 1423 aa16.96■□□□□ 0.3
SFXN3-206ENST00000487721 KIAA0232Q92628 1395 aa16.95■□□□□ 0.3
SFXN3-206ENST00000487721 HSPA5P11021 654 aaKnown RBP16.95■□□□□ 0.3
SFXN3-206ENST00000487721 CHRNA2Q15822 529 aa16.95■□□□□ 0.3
SFXN3-206ENST00000487721 ABCA3Q99758 1704 aa16.95■□□□□ 0.3
SFXN3-206ENST00000487721 EN1Q05925 392 aaPredicted RBP16.94■□□□□ 0.3
SFXN3-206ENST00000487721 STRN4Q9NRL3 753 aa16.94■□□□□ 0.3
SFXN3-206ENST00000487721 A0A1W2PP64 1363 aa16.93■□□□□ 0.3
SFXN3-206ENST00000487721 PSDA5PKW4 1024 aaPredicted RBP16.93■□□□□ 0.3
SFXN3-206ENST00000487721 EVA1CP58658 441 aa16.93■□□□□ 0.3
SFXN3-206ENST00000487721 POLR3GLQ9BT43 218 aa16.93■□□□□ 0.3
SFXN3-206ENST00000487721 EDC4Q6P2E9 1401 aaKnown RBP16.93■□□□□ 0.3
SFXN3-206ENST00000487721 SPATA31A1Q5TZJ5 1347 aa16.93■□□□□ 0.3
SFXN3-206ENST00000487721 COL14A1Q05707 1796 aaKnown RBP16.92■□□□□ 0.3
SFXN3-206ENST00000487721 ZBTB7CA1YPR0 619 aa16.92■□□□□ 0.3
SFXN3-206ENST00000487721 CPDO75976 1380 aa16.91■□□□□ 0.3
SFXN3-206ENST00000487721 ANKRD36BQ8N2N9 1353 aa16.9■□□□□ 0.3
SFXN3-206ENST00000487721 NRAPQ86VF7 1730 aa16.9■□□□□ 0.3
SFXN3-206ENST00000487721 FAM196AQ6ZSG2 479 aa16.9■□□□□ 0.3
SFXN3-206ENST00000487721 NME9Q86XW9 330 aa16.9■□□□□ 0.3
SFXN3-206ENST00000487721 USP35Q9P2H5 1018 aa16.9■□□□□ 0.3
SFXN3-206ENST00000487721 CD163L1Q9NR16 1453 aa16.9■□□□□ 0.3
SFXN3-206ENST00000487721 SOX12O15370 315 aa16.89■□□□□ 0.29
SFXN3-206ENST00000487721 USP31Q70CQ4 1352 aa16.89■□□□□ 0.29
SFXN3-206ENST00000487721 TRIM37O94972 964 aa16.88■□□□□ 0.29
SFXN3-206ENST00000487721 COG3Q96JB2 828 aa16.88■□□□□ 0.29
SFXN3-206ENST00000487721 EZH2Q15910 746 aaKnown RBP16.87■□□□□ 0.29
SFXN3-206ENST00000487721 BARGINQ6ZT62 677 aa16.87■□□□□ 0.29
SFXN3-206ENST00000487721 ZEB1P37275 1124 aaPredicted RBP16.86■□□□□ 0.29
SFXN3-206ENST00000487721 PDE3BQ13370 1112 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms