RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 ANKARQ7Z5J8 1434 aa12.61□□□□□ -0.39
PRKCB-208ENST00000487674 SLIT2O94813 1529 aa12.6□□□□□ -0.39
PRKCB-208ENST00000487674 PRAM1Q96QH2 718 aa12.59□□□□□ -0.39
PRKCB-208ENST00000487674 SBNO1A3KN83 1393 aa12.58□□□□□ -0.4
PRKCB-208ENST00000487674 PLCH1Q4KWH8 1693 aa12.58□□□□□ -0.4
PRKCB-208ENST00000487674 GLI3P10071 1580 aa12.58□□□□□ -0.4
PRKCB-208ENST00000487674 KRT28Q7Z3Y7 464 aa12.58□□□□□ -0.4
PRKCB-208ENST00000487674 NWD2Q9ULI1 1742 aa12.58□□□□□ -0.4
PRKCB-208ENST00000487674 PHF8Q9UPP1 1060 aa12.58□□□□□ -0.4
PRKCB-208ENST00000487674 ARHGEF10O15013 1369 aa12.57□□□□□ -0.4
PRKCB-208ENST00000487674 RALGAPBQ86X10 1494 aa12.57□□□□□ -0.4
PRKCB-208ENST00000487674 TRPM3Q9HCF6 1732 aaPredicted RBP12.57□□□□□ -0.4
PRKCB-208ENST00000487674 EIF3AQ14152 1382 aaKnown RBP12.56□□□□□ -0.4
PRKCB-208ENST00000487674 C19orf67A6NJJ6 358 aa12.56□□□□□ -0.4
PRKCB-208ENST00000487674 PSME1Q06323 249 aa12.56□□□□□ -0.4
PRKCB-208ENST00000487674 SAFB2Q14151 953 aaKnown RBP eCLIP12.56□□□□□ -0.4
PRKCB-208ENST00000487674 GJD4Q96KN9 370 aaPredicted RBP12.56□□□□□ -0.4
PRKCB-208ENST00000487674 POGKQ9P215 609 aa12.56□□□□□ -0.4
PRKCB-208ENST00000487674 TULP4Q9NRJ4 1543 aa12.56□□□□□ -0.4
PRKCB-208ENST00000487674 CHADLQ6NUI6 762 aa12.55□□□□□ -0.4
PRKCB-208ENST00000487674 UNC5CLQ8IV45 518 aa12.55□□□□□ -0.4
PRKCB-208ENST00000487674 ALS2Q96Q42 1657 aa12.54□□□□□ -0.4
PRKCB-208ENST00000487674 ARHGEF28Q8N1W1 1705 aaKnown RBP12.54□□□□□ -0.4
PRKCB-208ENST00000487674 HAP1P54257 671 aaPredicted RBP12.54□□□□□ -0.4
PRKCB-208ENST00000487674 ITSN1Q15811 1721 aa12.54□□□□□ -0.4
PRKCB-208ENST00000487674 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
PRKCB-208ENST00000487674 EP400Q96L91 3159 aa12.53□□□□□ -0.4
PRKCB-208ENST00000487674 NRAPQ86VF7 1730 aa12.52□□□□□ -0.41
PRKCB-208ENST00000487674 HRCP23327 699 aa12.52□□□□□ -0.41
PRKCB-208ENST00000487674 DCAF11Q8TEB1 546 aa12.52□□□□□ -0.41
PRKCB-208ENST00000487674 TRAK1Q9UPV9 953 aa12.52□□□□□ -0.41
PRKCB-208ENST00000487674 BRWD3Q6RI45 1802 aa12.52□□□□□ -0.41
PRKCB-208ENST00000487674 CRYBG1Q9Y4K1 1723 aa12.51□□□□□ -0.41
PRKCB-208ENST00000487674 LMOD2Q6P5Q4 547 aa12.51□□□□□ -0.41
PRKCB-208ENST00000487674 CCDC125Q86Z20 511 aa12.51□□□□□ -0.41
PRKCB-208ENST00000487674 CABLES1Q8TDN4 633 aa12.51□□□□□ -0.41
PRKCB-208ENST00000487674 MINK1Q8N4C8 1332 aaPredicted RBP12.51□□□□□ -0.41
PRKCB-208ENST00000487674 GPRASP1Q5JY77 1395 aa12.51□□□□□ -0.41
PRKCB-208ENST00000487674 VPS72Q15906 364 aa12.5□□□□□ -0.41
PRKCB-208ENST00000487674 PMFBP1Q8TBY8 1022 aa12.5□□□□□ -0.41
PRKCB-208ENST00000487674 HIRIP3Q9BW71 556 aaPredicted RBP12.5□□□□□ -0.41
PRKCB-208ENST00000487674 KDM2AQ9Y2K7 1162 aa12.5□□□□□ -0.41
PRKCB-208ENST00000487674 PRR36Q9H6K5 1346 aa12.5□□□□□ -0.41
PRKCB-208ENST00000487674 KIAA1210Q9ULL0 1709 aa12.5□□□□□ -0.41
PRKCB-208ENST00000487674 COL14A1Q05707 1796 aaKnown RBP12.5□□□□□ -0.41
PRKCB-208ENST00000487674 ATP7BP35670 1465 aa12.49□□□□□ -0.41
PRKCB-208ENST00000487674 BLMP54132 1417 aaPredicted RBP12.49□□□□□ -0.41
PRKCB-208ENST00000487674 WASLO00401 505 aaPredicted RBP12.49□□□□□ -0.41
PRKCB-208ENST00000487674 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
PRKCB-208ENST00000487674 TOPAZ1Q8N9V7 1692 aa12.48□□□□□ -0.41
PRKCB-208ENST00000487674 PLEKHG5O94827 1062 aa12.47□□□□□ -0.41
PRKCB-208ENST00000487674 SEPT12Q8IYM1 358 aa12.46□□□□□ -0.41
PRKCB-208ENST00000487674 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
PRKCB-208ENST00000487674 CCDC9Q9Y3X0 531 aaKnown RBP12.46□□□□□ -0.41
PRKCB-208ENST00000487674 PHRF1Q9P1Y6 1649 aaKnown RBP12.46□□□□□ -0.41
PRKCB-208ENST00000487674 FAM83GA6ND36 823 aa12.45□□□□□ -0.42
PRKCB-208ENST00000487674 ONECUT3O60422 494 aaPredicted RBP12.45□□□□□ -0.42
PRKCB-208ENST00000487674 NGDNQ8NEJ9 315 aaKnown RBP12.45□□□□□ -0.42
PRKCB-208ENST00000487674 THSD7AQ9UPZ6 1657 aa12.43□□□□□ -0.42
PRKCB-208ENST00000487674 GABBR2O75899 941 aa12.43□□□□□ -0.42
PRKCB-208ENST00000487674 KRT27Q7Z3Y8 459 aa12.43□□□□□ -0.42
PRKCB-208ENST00000487674 BTG4Q9NY30 223 aa12.43□□□□□ -0.42
PRKCB-208ENST00000487674 NUDT16Q96DE0 195 aaKnown RBP12.42□□□□□ -0.42
PRKCB-208ENST00000487674 POLR3AO14802 1390 aaPredicted RBP12.42□□□□□ -0.42
PRKCB-208ENST00000487674 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
PRKCB-208ENST00000487674 RGPD1P0DJD0 1748 aa12.41□□□□□ -0.42
PRKCB-208ENST00000487674 SF3B2Q13435 895 aaKnown RBP12.41□□□□□ -0.42
PRKCB-208ENST00000487674 NRKQ7Z2Y5 1582 aa12.4□□□□□ -0.42
PRKCB-208ENST00000487674 A0A0G2JS52 829 aa12.4□□□□□ -0.42
PRKCB-208ENST00000487674 MYT1Q01538 1121 aa12.4□□□□□ -0.42
PRKCB-208ENST00000487674 FAM98CQ17RN3 349 aaKnown RBP12.4□□□□□ -0.42
PRKCB-208ENST00000487674 PRDM11Q9NQV5 511 aa12.4□□□□□ -0.42
PRKCB-208ENST00000487674 SPATA31A5Q5VU36 1347 aa12.39□□□□□ -0.43
PRKCB-208ENST00000487674 SPATA31A7Q8IWB4 1347 aa12.39□□□□□ -0.43
PRKCB-208ENST00000487674 QRICH2Q9H0J4 1663 aa12.39□□□□□ -0.43
PRKCB-208ENST00000487674 DEFB132Q7Z7B7 95 aa12.39□□□□□ -0.43
PRKCB-208ENST00000487674 CDK19Q9BWU1 502 aa12.39□□□□□ -0.43
PRKCB-208ENST00000487674 KIAA0232Q92628 1395 aa12.39□□□□□ -0.43
PRKCB-208ENST00000487674 CCDC61Q9Y6R9 512 aa12.38□□□□□ -0.43
PRKCB-208ENST00000487674 SRCAPQ6ZRS2 3230 aa12.38□□□□□ -0.43
PRKCB-208ENST00000487674 LRP5O75197 1615 aa12.37□□□□□ -0.43
PRKCB-208ENST00000487674 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
PRKCB-208ENST00000487674 PLEKHG3A1L390 1219 aa12.37□□□□□ -0.43
PRKCB-208ENST00000487674 ACEP12821 1306 aa12.37□□□□□ -0.43
PRKCB-208ENST00000487674 LMO7Q8WWI1 1683 aa12.36□□□□□ -0.43
PRKCB-208ENST00000487674 NBPF1Q3BBV0 1214 aa12.36□□□□□ -0.43
PRKCB-208ENST00000487674 PPIP5K1Q6PFW1 1433 aa12.36□□□□□ -0.43
PRKCB-208ENST00000487674 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
PRKCB-208ENST00000487674 BAG6P46379 1132 aa12.35□□□□□ -0.43
PRKCB-208ENST00000487674 NBPF8Q3BBV2 869 aa12.35□□□□□ -0.43
PRKCB-208ENST00000487674 DISP2A7MBM2 1401 aa12.35□□□□□ -0.43
PRKCB-208ENST00000487674 USP19O94966 1318 aa12.35□□□□□ -0.43
PRKCB-208ENST00000487674 SPATA31A1Q5TZJ5 1347 aa12.35□□□□□ -0.43
PRKCB-208ENST00000487674 BRD4O60885 1362 aaPredicted RBP12.34□□□□□ -0.43
PRKCB-208ENST00000487674 CPDO75976 1380 aa12.34□□□□□ -0.43
PRKCB-208ENST00000487674 TRPM1Q7Z4N2 1603 aa12.34□□□□□ -0.43
PRKCB-208ENST00000487674 CHRNA2Q15822 529 aa12.34□□□□□ -0.43
PRKCB-208ENST00000487674 SSH2Q76I76 1423 aa12.34□□□□□ -0.43
PRKCB-208ENST00000487674 ZC3H6P61129 1189 aaKnown RBP12.33□□□□□ -0.44
PRKCB-208ENST00000487674 SRPK2P78362 688 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms