RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 MST1RQ04912 1400 aa19.6■□□□□ 0.73
GCA-210ENST00000487445 TOPAZ1Q8N9V7 1692 aa19.6■□□□□ 0.73
GCA-210ENST00000487445 ZRANB1Q9UGI0 708 aa19.6■□□□□ 0.73
GCA-210ENST00000487445 XPCQ01831 940 aaPredicted RBP19.59■□□□□ 0.73
GCA-210ENST00000487445 SLAIN2Q9P270 581 aa19.58■□□□□ 0.73
GCA-210ENST00000487445 COG3Q96JB2 828 aa19.58■□□□□ 0.72
GCA-210ENST00000487445 FAM9BQ8IZU0 186 aa19.56■□□□□ 0.72
GCA-210ENST00000487445 BRD4O60885 1362 aaPredicted RBP19.56■□□□□ 0.72
GCA-210ENST00000487445 RGPD8O14715 1765 aaPredicted RBP19.56■□□□□ 0.72
GCA-210ENST00000487445 ITSN1Q15811 1721 aa19.55■□□□□ 0.72
GCA-210ENST00000487445 TTC21AQ8NDW8 1320 aa19.55■□□□□ 0.72
GCA-210ENST00000487445 DDX17Q92841 729 aaKnown RBP19.55■□□□□ 0.72
GCA-210ENST00000487445 NUTM2GQ5VZR2 741 aa19.54■□□□□ 0.72
GCA-210ENST00000487445 ABTB2Q8N961 1025 aa19.54■□□□□ 0.72
GCA-210ENST00000487445 SSH2Q76I76 1423 aa19.54■□□□□ 0.72
GCA-210ENST00000487445 KRT28Q7Z3Y7 464 aa19.53■□□□□ 0.72
GCA-210ENST00000487445 FBLN1P23142 703 aa19.53■□□□□ 0.72
GCA-210ENST00000487445 BRINP3Q76B58 766 aa19.53■□□□□ 0.72
GCA-210ENST00000487445 LTBP4Q8N2S1 1624 aa19.52■□□□□ 0.72
GCA-210ENST00000487445 NLRP6P59044 892 aa19.52■□□□□ 0.72
GCA-210ENST00000487445 LMOD2Q6P5Q4 547 aa19.52■□□□□ 0.72
GCA-210ENST00000487445 SOX12O15370 315 aa19.51■□□□□ 0.71
GCA-210ENST00000487445 MTHFSP49914 203 aa19.51■□□□□ 0.71
GCA-210ENST00000487445 XIRP1Q702N8 1843 aaKnown RBP19.5■□□□□ 0.71
GCA-210ENST00000487445 MON2Q7Z3U7 1717 aa19.5■□□□□ 0.71
GCA-210ENST00000487445 AKAP12Q02952 1782 aa19.5■□□□□ 0.71
GCA-210ENST00000487445 PNISRQ8TF01 805 aaKnown RBP19.49■□□□□ 0.71
GCA-210ENST00000487445 NPHP3Q7Z494 1330 aa19.49■□□□□ 0.71
GCA-210ENST00000487445 PPM1GO15355 546 aaPredicted RBP19.48■□□□□ 0.71
GCA-210ENST00000487445 PLEKHG5O94827 1062 aa19.48■□□□□ 0.71
GCA-210ENST00000487445 RRS1Q15050 365 aaKnown RBP19.46■□□□□ 0.71
GCA-210ENST00000487445 CFAP53Q96M91 514 aa19.46■□□□□ 0.71
GCA-210ENST00000487445 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
GCA-210ENST00000487445 NRKQ7Z2Y5 1582 aa19.46■□□□□ 0.71
GCA-210ENST00000487445 POLKQ9UBT6 870 aa19.45■□□□□ 0.7
GCA-210ENST00000487445 OVOS2A0A0J9YW53 1432 aa19.45■□□□□ 0.7
GCA-210ENST00000487445 OVOS2Q6IE36 1432 aa19.45■□□□□ 0.7
GCA-210ENST00000487445 EMILIN1Q9Y6C2 1016 aa19.44■□□□□ 0.7
GCA-210ENST00000487445 USP31Q70CQ4 1352 aa19.44■□□□□ 0.7
GCA-210ENST00000487445 WDR43Q15061 677 aaKnown RBP eCLIP19.44■□□□□ 0.7
GCA-210ENST00000487445 KIF1AQ12756 1690 aa19.43■□□□□ 0.7
GCA-210ENST00000487445 KIF20BQ96Q89 1820 aa19.42■□□□□ 0.7
GCA-210ENST00000487445 AATKQ6ZMQ8 1374 aa19.41■□□□□ 0.7
GCA-210ENST00000487445 TOM1O60784 492 aa19.41■□□□□ 0.7
GCA-210ENST00000487445 PIP4K2BP78356 416 aa19.39■□□□□ 0.7
GCA-210ENST00000487445 ADAMTS8Q9UP79 889 aa19.39■□□□□ 0.7
GCA-210ENST00000487445 HNRNPUQ00839 825 aaKnown RBP eCLIP19.39■□□□□ 0.69
GCA-210ENST00000487445 SBNO1A3KN83 1393 aa19.38■□□□□ 0.69
GCA-210ENST00000487445 PIK3C2AO00443 1686 aa19.38■□□□□ 0.69
GCA-210ENST00000487445 SENP3-EIF4A1A0A087X0R7 540 aa19.37■□□□□ 0.69
GCA-210ENST00000487445 UBAP1LF5GYI3 381 aa19.37■□□□□ 0.69
GCA-210ENST00000487445 ANKRD26Q9UPS8 1709 aa19.37■□□□□ 0.69
GCA-210ENST00000487445 SOS2Q07890 1332 aaPredicted RBP19.37■□□□□ 0.69
GCA-210ENST00000487445 SPATA31A3Q5VYP0 1347 aa19.37■□□□□ 0.69
GCA-210ENST00000487445 ZBTB7CA1YPR0 619 aa19.37■□□□□ 0.69
GCA-210ENST00000487445 MAP3K19Q56UN5 1328 aa19.36■□□□□ 0.69
GCA-210ENST00000487445 PXDNQ92626 1479 aa19.36■□□□□ 0.69
GCA-210ENST00000487445 DIAPH1O60610 1272 aaKnown RBP19.36■□□□□ 0.69
GCA-210ENST00000487445 KCNH5Q8NCM2 988 aa19.36■□□□□ 0.69
GCA-210ENST00000487445 U2SURPO15042 1029 aaKnown RBP19.35■□□□□ 0.69
GCA-210ENST00000487445 GCP02774 474 aa19.35■□□□□ 0.69
GCA-210ENST00000487445 AMPHP49418 695 aa19.35■□□□□ 0.69
GCA-210ENST00000487445 CERKQ8TCT0 537 aa19.35■□□□□ 0.69
GCA-210ENST00000487445 NUDCQ9Y266 331 aa19.35■□□□□ 0.69
GCA-210ENST00000487445 TNS3Q68CZ2 1445 aa19.35■□□□□ 0.69
GCA-210ENST00000487445 CABLES1Q8TDN4 633 aa19.34■□□□□ 0.69
GCA-210ENST00000487445 PNPLA6Q8IY17 1366 aa19.34■□□□□ 0.69
GCA-210ENST00000487445 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.69
GCA-210ENST00000487445 U2AF1Q01081 240 aaKnown RBP eCLIP19.33■□□□□ 0.69
GCA-210ENST00000487445 ARHGEF10O15013 1369 aa19.32■□□□□ 0.68
GCA-210ENST00000487445 HSP90AB2PQ58FF8 381 aa19.32■□□□□ 0.68
GCA-210ENST00000487445 USP19O94966 1318 aa19.31■□□□□ 0.68
GCA-210ENST00000487445 SMG6Q86US8 1419 aaKnown RBP19.31■□□□□ 0.68
GCA-210ENST00000487445 ZC3H6P61129 1189 aaKnown RBP19.3■□□□□ 0.68
GCA-210ENST00000487445 CCDC146Q8IYE0 955 aa19.3■□□□□ 0.68
GCA-210ENST00000487445 TRPM3Q9HCF6 1732 aaPredicted RBP19.3■□□□□ 0.68
GCA-210ENST00000487445 INSRP06213 1382 aa19.29■□□□□ 0.68
GCA-210ENST00000487445 LRRC59Q96AG4 307 aaKnown RBP19.29■□□□□ 0.68
GCA-210ENST00000487445 CDK12Q9NYV4 1490 aaPredicted RBP19.29■□□□□ 0.68
GCA-210ENST00000487445 FLT4P35916 1363 aa19.29■□□□□ 0.68
GCA-210ENST00000487445 HOXC9P31274 260 aa19.28■□□□□ 0.68
GCA-210ENST00000487445 IL13P35225 146 aa19.28■□□□□ 0.68
GCA-210ENST00000487445 HAP1P54257 671 aaPredicted RBP19.28■□□□□ 0.68
GCA-210ENST00000487445 SALL2Q9Y467 1007 aaPredicted RBP19.28■□□□□ 0.68
GCA-210ENST00000487445 COL3A1P02461 1466 aaPredicted RBP19.28■□□□□ 0.68
GCA-210ENST00000487445 EIF4A2Q14240 407 aaKnown RBP19.27■□□□□ 0.68
GCA-210ENST00000487445 ARHGEF25Q86VW2 580 aa19.27■□□□□ 0.68
GCA-210ENST00000487445 ROBO1Q9Y6N7 1651 aa19.27■□□□□ 0.67
GCA-210ENST00000487445 CENPBP07199 599 aaPredicted RBP19.26■□□□□ 0.67
GCA-210ENST00000487445 LTV1Q96GA3 475 aaPredicted RBP19.26■□□□□ 0.67
GCA-210ENST00000487445 IP6K1Q92551 441 aa19.25■□□□□ 0.67
GCA-210ENST00000487445 SLIT3O75094 1523 aa19.24■□□□□ 0.67
GCA-210ENST00000487445 HMOX1P09601 288 aa19.24■□□□□ 0.67
GCA-210ENST00000487445 ALS2Q96Q42 1657 aa19.24■□□□□ 0.67
GCA-210ENST00000487445 NFAT5O94916 1531 aa19.23■□□□□ 0.67
GCA-210ENST00000487445 IQSEC2Q5JU85 1478 aa19.23■□□□□ 0.67
GCA-210ENST00000487445 MAP2P11137 1827 aaKnown RBP19.23■□□□□ 0.67
GCA-210ENST00000487445 MED1Q15648 1581 aaPredicted RBP19.23■□□□□ 0.67
GCA-210ENST00000487445 KIF24Q5T7B8 1368 aa19.23■□□□□ 0.67
GCA-210ENST00000487445 MARF1Q9Y4F3 1742 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms