RNA–Protein interactions for RNA: ENST00000487347.1

LPP-217, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-217ENST00000487347 USP17L3A6NCW0 530 aa9.36□□□□□ -0.91
LPP-217ENST00000487347 USP17L4A6NCW7 530 aa9.36□□□□□ -0.91
LPP-217ENST00000487347 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
LPP-217ENST00000487347 USP17L1Q7RTZ2 530 aa9.36□□□□□ -0.91
LPP-217ENST00000487347 FAM174AQ8TBP5 190 aa9.36□□□□□ -0.91
LPP-217ENST00000487347 USB1Q9BQ65 265 aaKnown RBP9.36□□□□□ -0.91
LPP-217ENST00000487347 NBPF3Q9H094 633 aa9.36□□□□□ -0.91
LPP-217ENST00000487347 ERBB3P21860 1342 aa9.35□□□□□ -0.91
LPP-217ENST00000487347 ZC3H4Q9UPT8 1303 aaKnown RBP9.35□□□□□ -0.91
LPP-217ENST00000487347 TXNDC2Q86VQ3 553 aa9.35□□□□□ -0.91
LPP-217ENST00000487347 THAP11Q96EK4 314 aa9.35□□□□□ -0.91
LPP-217ENST00000487347 USP17L5A8MUK1 530 aa9.34□□□□□ -0.91
LPP-217ENST00000487347 SLAIN2Q9P270 581 aa9.34□□□□□ -0.91
LPP-217ENST00000487347 MAP10Q9P2G4 905 aa9.34□□□□□ -0.91
LPP-217ENST00000487347 NOVA2Q9UNW9 492 aaKnown RBP9.34□□□□□ -0.91
LPP-217ENST00000487347 B4GALNT3Q6L9W6 998 aa9.33□□□□□ -0.92
LPP-217ENST00000487347 FAM196BA6NMK8 535 aa9.32□□□□□ -0.92
LPP-217ENST00000487347 SKIP12755 728 aa9.32□□□□□ -0.92
LPP-217ENST00000487347 FAM69CQ0P6D2 419 aa9.32□□□□□ -0.92
LPP-217ENST00000487347 PTPRNQ16849 979 aa9.32□□□□□ -0.92
LPP-217ENST00000487347 OCSTAMPQ9BR26 566 aa9.32□□□□□ -0.92
LPP-217ENST00000487347 TK2O00142 265 aa9.31□□□□□ -0.92
LPP-217ENST00000487347 JUNDP17535 347 aa9.31□□□□□ -0.92
LPP-217ENST00000487347 CRTC2Q53ET0 693 aaPredicted RBP9.31□□□□□ -0.92
LPP-217ENST00000487347 ZNF687Q8N1G0 1237 aa9.31□□□□□ -0.92
LPP-217ENST00000487347 DEPDC4Q8N2C3 294 aa9.31□□□□□ -0.92
LPP-217ENST00000487347 PHTF2Q8N3S3 785 aa9.31□□□□□ -0.92
LPP-217ENST00000487347 LRCH3Q96II8 777 aa9.31□□□□□ -0.92
LPP-217ENST00000487347 USP17L15C9J2P7 530 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 USP17L10C9JJH3 530 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 USP17L13C9JLJ4 530 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 USP17L12C9JPN9 530 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 USP17L11C9JVI0 530 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 USP17L21D6R901 530 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 USP17L18D6R9N7 530 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 USP17L22D6RA61 530 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 USP17L17D6RBQ6 530 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 USP17L19D6RCP7 530 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 USP17L20D6RJB6 530 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 E9PSI1 815 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 USP17L24Q0WX57 530 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 SCUBE3Q8IX30 993 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 PRR14Q9BWN1 585 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.3□□□□□ -0.92
LPP-217ENST00000487347 CEP126Q9P2H0 1117 aa9.3□□□□□ -0.92
LPP-217ENST00000487347 SSFA2P28290 1259 aa9.29□□□□□ -0.92
LPP-217ENST00000487347 PTK7Q13308 1070 aa9.29□□□□□ -0.92
LPP-217ENST00000487347 OTUD5Q96G74 571 aa9.29□□□□□ -0.92
LPP-217ENST00000487347 MKRN1Q9UHC7 482 aaKnown RBP9.29□□□□□ -0.92
LPP-217ENST00000487347 CHIC2Q9UKJ5 165 aa9.29□□□□□ -0.92
LPP-217ENST00000487347 GPSM3Q9Y4H4 160 aa9.29□□□□□ -0.92
LPP-217ENST00000487347 APLP1P51693 650 aa9.28□□□□□ -0.92
LPP-217ENST00000487347 MRPL50Q8N5N7 158 aaKnown RBP9.28□□□□□ -0.92
LPP-217ENST00000487347 CCER1Q8TC90 406 aaPredicted RBP9.28□□□□□ -0.92
LPP-217ENST00000487347 FMNL1O95466 1100 aaPredicted RBP9.27□□□□□ -0.93
LPP-217ENST00000487347 NCOA4Q13772 614 aa9.26□□□□□ -0.93
LPP-217ENST00000487347 PDXDC2PQ6P474 469 aa9.26□□□□□ -0.93
LPP-217ENST00000487347 CLP1Q92989 425 aaKnown RBP9.26□□□□□ -0.93
LPP-217ENST00000487347 EVA1BQ9NVM1 165 aa9.26□□□□□ -0.93
LPP-217ENST00000487347 HRO43593 1189 aa9.25□□□□□ -0.93
LPP-217ENST00000487347 DXOO77932 396 aaKnown RBP9.25□□□□□ -0.93
LPP-217ENST00000487347 UNCXA6NJT0 531 aa9.24□□□□□ -0.93
LPP-217ENST00000487347 ATP5J2-PTCD1G3V325 749 aa9.24□□□□□ -0.93
LPP-217ENST00000487347 LZTS3O60299 673 aaPredicted RBP9.24□□□□□ -0.93
LPP-217ENST00000487347 NR1I2O75469 434 aa9.24□□□□□ -0.93
LPP-217ENST00000487347 RASA1P20936 1047 aa9.24□□□□□ -0.93
LPP-217ENST00000487347 CTHP32929 405 aa9.24□□□□□ -0.93
LPP-217ENST00000487347 MCCD1P59942 119 aaPredicted RBP9.24□□□□□ -0.93
LPP-217ENST00000487347 PTK2Q05397 1052 aa9.24□□□□□ -0.93
LPP-217ENST00000487347 SLFNL1Q499Z3 407 aa9.24□□□□□ -0.93
LPP-217ENST00000487347 MSS51Q4VC12 460 aa9.24□□□□□ -0.93
LPP-217ENST00000487347 FAM160A2Q8N612 972 aaPredicted RBP9.24□□□□□ -0.93
LPP-217ENST00000487347 PLPP7Q8NBV4 271 aa9.24□□□□□ -0.93
LPP-217ENST00000487347 GPKOWQ92917 476 aaPredicted RBP eCLIP9.24□□□□□ -0.93
LPP-217ENST00000487347 CDCA7Q9BWT1 371 aaPredicted RBP9.24□□□□□ -0.93
LPP-217ENST00000487347 SOWAHBA6NEL2 793 aa9.23□□□□□ -0.93
LPP-217ENST00000487347 ST18O60284 1047 aa9.23□□□□□ -0.93
LPP-217ENST00000487347 CCNYL3P0C7X3 344 aa9.23□□□□□ -0.93
LPP-217ENST00000487347 ARID4AP29374 1257 aaPredicted RBP9.23□□□□□ -0.93
LPP-217ENST00000487347 KCNH2Q12809 1159 aa9.23□□□□□ -0.93
LPP-217ENST00000487347 LARP1Q6PKG0 1096 aaKnown RBP9.23□□□□□ -0.93
LPP-217ENST00000487347 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
LPP-217ENST00000487347 ADGRD1Q6QNK2 874 aa9.23□□□□□ -0.93
LPP-217ENST00000487347 DNAJC14Q6Y2X3 702 aaPredicted RBP9.23□□□□□ -0.93
LPP-217ENST00000487347 RNF135Q8IUD6 432 aa9.23□□□□□ -0.93
LPP-217ENST00000487347 ANKMY2Q8IV38 441 aa9.23□□□□□ -0.93
LPP-217ENST00000487347 FAM200AQ8TCP9 573 aa9.23□□□□□ -0.93
LPP-217ENST00000487347 PCDHB3Q9Y5E6 796 aa9.23□□□□□ -0.93
LPP-217ENST00000487347 RBM47A0AV96 593 aaKnown RBP9.22□□□□□ -0.93
LPP-217ENST00000487347 MMP16P51512 607 aa9.22□□□□□ -0.93
LPP-217ENST00000487347 EMP3P54852 163 aa9.22□□□□□ -0.93
LPP-217ENST00000487347 PPP4CP60510 307 aa9.22□□□□□ -0.93
LPP-217ENST00000487347 NOM1Q5C9Z4 860 aaKnown RBP9.22□□□□□ -0.93
LPP-217ENST00000487347 ARMC2Q8NEN0 867 aa9.22□□□□□ -0.93
LPP-217ENST00000487347 ZNF592Q92610 1267 aa9.22□□□□□ -0.93
LPP-217ENST00000487347 HPS5Q9UPZ3 1129 aa9.22□□□□□ -0.93
LPP-217ENST00000487347 PCDHB9Q9Y5E1 797 aa9.22□□□□□ -0.93
LPP-217ENST00000487347 POTEB3A0JP26 581 aa9.21□□□□□ -0.94
LPP-217ENST00000487347 IGSF3O75054 1194 aa9.21□□□□□ -0.94
LPP-217ENST00000487347 DKK1O94907 266 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms