RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 AATKQ6ZMQ8 1374 aa28.67■■■□□ 2.18
TRADD-202ENST00000486556 NWD1Q149M9 1564 aa28.66■■■□□ 2.18
TRADD-202ENST00000486556 FMN2Q9NZ56 1722 aa28.66■■■□□ 2.18
TRADD-202ENST00000486556 NGDNQ8NEJ9 315 aaKnown RBP28.65■■■□□ 2.18
TRADD-202ENST00000486556 ADGRL3Q9HAR2 1447 aa28.65■■■□□ 2.18
TRADD-202ENST00000486556 TTC21AQ8NDW8 1320 aa28.65■■■□□ 2.18
TRADD-202ENST00000486556 SSH2Q76I76 1423 aa28.64■■■□□ 2.18
TRADD-202ENST00000486556 CCDC146Q8IYE0 955 aa28.64■■■□□ 2.17
TRADD-202ENST00000486556 PMFBP1Q8TBY8 1022 aa28.64■■■□□ 2.17
TRADD-202ENST00000486556 POLKQ9UBT6 870 aa28.64■■■□□ 2.17
TRADD-202ENST00000486556 NRKQ7Z2Y5 1582 aa28.63■■■□□ 2.17
TRADD-202ENST00000486556 FKBP8Q14318 412 aa28.63■■■□□ 2.17
TRADD-202ENST00000486556 RUNDC1Q96C34 613 aa28.62■■■□□ 2.17
TRADD-202ENST00000486556 NALCNQ8IZF0 1738 aa28.62■■■□□ 2.17
TRADD-202ENST00000486556 APAF1O14727 1248 aa28.62■■■□□ 2.17
TRADD-202ENST00000486556 COL3A1P02461 1466 aaPredicted RBP28.61■■■□□ 2.17
TRADD-202ENST00000486556 ZNF521Q96K83 1311 aa28.6■■■□□ 2.17
TRADD-202ENST00000486556 RGPD8O14715 1765 aaPredicted RBP28.6■■■□□ 2.17
TRADD-202ENST00000486556 DIAPH1O60610 1272 aaKnown RBP28.59■■■□□ 2.17
TRADD-202ENST00000486556 ZRANB1Q9UGI0 708 aa28.59■■■□□ 2.17
TRADD-202ENST00000486556 U2AF1L5P0DN76 240 aaPredicted RBP28.58■■■□□ 2.17
TRADD-202ENST00000486556 U2AF1Q01081 240 aaKnown RBP eCLIP28.58■■■□□ 2.17
TRADD-202ENST00000486556 NCBP3Q53F19 620 aaKnown RBP28.58■■■□□ 2.17
TRADD-202ENST00000486556 PROSER2Q86WR7 435 aaPredicted RBP28.57■■■□□ 2.16
TRADD-202ENST00000486556 C14orf37Q86TY3 774 aa28.55■■■□□ 2.16
TRADD-202ENST00000486556 RBM33Q96EV2 1170 aaKnown RBP28.55■■■□□ 2.16
TRADD-202ENST00000486556 MAP2P11137 1827 aaKnown RBP28.55■■■□□ 2.16
TRADD-202ENST00000486556 OVOS2A0A0J9YW53 1432 aa28.55■■■□□ 2.16
TRADD-202ENST00000486556 OVOS2Q6IE36 1432 aa28.55■■■□□ 2.16
TRADD-202ENST00000486556 GOLGA2Q08379 1002 aa28.55■■■□□ 2.16
TRADD-202ENST00000486556 CDCA7LQ96GN5 454 aa28.55■■■□□ 2.16
TRADD-202ENST00000486556 PNNQ9H307 717 aaKnown RBP28.54■■■□□ 2.16
TRADD-202ENST00000486556 PHF8Q9UPP1 1060 aa28.54■■■□□ 2.16
TRADD-202ENST00000486556 HSPA2P54652 639 aa28.53■■■□□ 2.16
TRADD-202ENST00000486556 FBLN1P23142 703 aa28.53■■■□□ 2.16
TRADD-202ENST00000486556 ERICH6BQ5W0A0 696 aa28.53■■■□□ 2.16
TRADD-202ENST00000486556 USP31Q70CQ4 1352 aa28.52■■■□□ 2.16
TRADD-202ENST00000486556 PPM1GO15355 546 aaPredicted RBP28.52■■■□□ 2.16
TRADD-202ENST00000486556 U2SURPO15042 1029 aaKnown RBP28.51■■■□□ 2.15
TRADD-202ENST00000486556 NCOA3Q9Y6Q9 1424 aa28.51■■■□□ 2.15
TRADD-202ENST00000486556 CDK12Q9NYV4 1490 aaPredicted RBP28.51■■■□□ 2.15
TRADD-202ENST00000486556 RNF123Q5XPI4 1314 aa28.5■■■□□ 2.15
TRADD-202ENST00000486556 AEBP2Q6ZN18 517 aaPredicted RBP28.5■■■□□ 2.15
TRADD-202ENST00000486556 TCP11L2Q8N4U5 519 aa28.5■■■□□ 2.15
TRADD-202ENST00000486556 LMTK3Q96Q04 1460 aa28.5■■■□□ 2.15
TRADD-202ENST00000486556 C19orf44Q9H6X5 657 aa28.5■■■□□ 2.15
TRADD-202ENST00000486556 EMILIN1Q9Y6C2 1016 aa28.5■■■□□ 2.15
TRADD-202ENST00000486556 FCHSD2O94868 740 aa28.47■■■□□ 2.15
TRADD-202ENST00000486556 CCDC27Q2M243 656 aa28.47■■■□□ 2.15
TRADD-202ENST00000486556 SLFN5Q08AF3 891 aa28.46■■■□□ 2.15
TRADD-202ENST00000486556 ESCO1Q5FWF5 840 aa28.46■■■□□ 2.15
TRADD-202ENST00000486556 PLEKHF1Q96S99 279 aa28.46■■■□□ 2.15
TRADD-202ENST00000486556 IQSEC2Q5JU85 1478 aa28.46■■■□□ 2.15
TRADD-202ENST00000486556 RRS1Q15050 365 aaKnown RBP28.46■■■□□ 2.15
TRADD-202ENST00000486556 WWC1Q8IX03 1113 aa28.45■■■□□ 2.14
TRADD-202ENST00000486556 TRMT2AQ8IZ69 625 aaKnown RBP28.45■■■□□ 2.14
TRADD-202ENST00000486556 RCAN3Q9UKA8 241 aa28.45■■■□□ 2.14
TRADD-202ENST00000486556 IL13P35225 146 aa28.44■■■□□ 2.14
TRADD-202ENST00000486556 PHF23Q9BUL5 403 aaPredicted RBP28.44■■■□□ 2.14
TRADD-202ENST00000486556 DUSP27Q5VZP5 1158 aa28.43■■■□□ 2.14
TRADD-202ENST00000486556 E9PSI1 815 aa28.43■■■□□ 2.14
TRADD-202ENST00000486556 NLRP6P59044 892 aa28.41■■■□□ 2.14
TRADD-202ENST00000486556 WDR63Q8IWG1 891 aa28.41■■■□□ 2.14
TRADD-202ENST00000486556 MAPK8IP3Q9UPT6 1336 aa28.4■■■□□ 2.14
TRADD-202ENST00000486556 PSME1Q06323 249 aa28.4■■■□□ 2.14
TRADD-202ENST00000486556 TMEM94Q12767 1356 aa28.39■■■□□ 2.14
TRADD-202ENST00000486556 PIK3C2AO00443 1686 aa28.39■■■□□ 2.13
TRADD-202ENST00000486556 DCCP43146 1447 aa28.39■■■□□ 2.13
TRADD-202ENST00000486556 ABTB2Q8N961 1025 aa28.39■■■□□ 2.13
TRADD-202ENST00000486556 NEUROD2Q15784 382 aa28.38■■■□□ 2.13
TRADD-202ENST00000486556 PAK3O75914 559 aaPredicted RBP28.37■■■□□ 2.13
TRADD-202ENST00000486556 STRCQ7RTU9 1775 aa28.37■■■□□ 2.13
TRADD-202ENST00000486556 USP54Q70EL1 1684 aa28.37■■■□□ 2.13
TRADD-202ENST00000486556 NEFMP07197 916 aa28.36■■■□□ 2.13
TRADD-202ENST00000486556 ATF3P18847 181 aa28.36■■■□□ 2.13
TRADD-202ENST00000486556 RSPH6AQ9H0K4 717 aa28.36■■■□□ 2.13
TRADD-202ENST00000486556 RRP7AQ9Y3A4 280 aaKnown RBP28.36■■■□□ 2.13
TRADD-202ENST00000486556 LRRC7Q96NW7 1537 aa28.36■■■□□ 2.13
TRADD-202ENST00000486556 STRCP1A6NGW2 1772 aa28.36■■■□□ 2.13
TRADD-202ENST00000486556 TMPOP42166 694 aaKnown RBP28.35■■■□□ 2.13
TRADD-202ENST00000486556 IRX6P78412 446 aaPredicted RBP28.35■■■□□ 2.13
TRADD-202ENST00000486556 ORAI2Q96SN7 254 aa28.35■■■□□ 2.13
TRADD-202ENST00000486556 C1orf167Q5SNV9 1468 aa28.35■■■□□ 2.13
TRADD-202ENST00000486556 KIF24Q5T7B8 1368 aa28.33■■■□□ 2.13
TRADD-202ENST00000486556 CADPS2Q86UW7 1296 aa28.32■■■□□ 2.12
TRADD-202ENST00000486556 SPINK5Q9NQ38 1064 aaPredicted RBP28.32■■■□□ 2.12
TRADD-202ENST00000486556 SBNO1A3KN83 1393 aa28.32■■■□□ 2.12
TRADD-202ENST00000486556 MAP3K19Q56UN5 1328 aa28.32■■■□□ 2.12
TRADD-202ENST00000486556 PRKAR2BP31323 418 aa28.31■■■□□ 2.12
TRADD-202ENST00000486556 RRP1P56182 461 aaKnown RBP28.31■■■□□ 2.12
TRADD-202ENST00000486556 EIF4A2Q14240 407 aaKnown RBP28.3■■■□□ 2.12
TRADD-202ENST00000486556 FLT4P35916 1363 aa28.3■■■□□ 2.12
TRADD-202ENST00000486556 FOXO3O43524 673 aa28.29■■■□□ 2.12
TRADD-202ENST00000486556 DMRT2Q9Y5R5 561 aa28.29■■■□□ 2.12
TRADD-202ENST00000486556 KIF1AQ12756 1690 aa28.29■■■□□ 2.12
TRADD-202ENST00000486556 HSP90AB2PQ58FF8 381 aa28.28■■■□□ 2.12
TRADD-202ENST00000486556 SOX12O15370 315 aa28.27■■■□□ 2.12
TRADD-202ENST00000486556 AMPHP49418 695 aa28.27■■■□□ 2.12
TRADD-202ENST00000486556 PELP1Q8IZL8 1130 aaKnown RBP28.27■■■□□ 2.12
TRADD-202ENST00000486556 MST1RQ04912 1400 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms