RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 CCDC61Q9Y6R9 512 aa9.54□□□□□ -0.88
UBR4-214ENST00000486515 QRICH2Q9H0J4 1663 aa9.54□□□□□ -0.88
UBR4-214ENST00000486515 KIF7Q2M1P5 1343 aa9.54□□□□□ -0.88
UBR4-214ENST00000486515 XRN1Q8IZH2 1706 aaKnown RBP9.53□□□□□ -0.88
UBR4-214ENST00000486515 CCDC7Q96M83 1385 aa9.53□□□□□ -0.88
UBR4-214ENST00000486515 NUTM2FA1L443 756 aa9.53□□□□□ -0.88
UBR4-214ENST00000486515 DDX10Q13206 875 aaKnown RBP9.53□□□□□ -0.88
UBR4-214ENST00000486515 TNS4Q8IZW8 715 aa9.53□□□□□ -0.88
UBR4-214ENST00000486515 SPON1Q9HCB6 807 aa9.53□□□□□ -0.88
UBR4-214ENST00000486515 CAMTA1Q9Y6Y1 1673 aa9.52□□□□□ -0.89
UBR4-214ENST00000486515 NGDNQ8NEJ9 315 aaKnown RBP9.52□□□□□ -0.89
UBR4-214ENST00000486515 NUDT16Q96DE0 195 aaKnown RBP9.52□□□□□ -0.89
UBR4-214ENST00000486515 ADGRL3Q9HAR2 1447 aa9.51□□□□□ -0.89
UBR4-214ENST00000486515 ESCO1Q5FWF5 840 aa9.51□□□□□ -0.89
UBR4-214ENST00000486515 ZNF692Q9BU19 519 aaPredicted RBP9.51□□□□□ -0.89
UBR4-214ENST00000486515 KNSTRNQ9Y448 316 aa9.51□□□□□ -0.89
UBR4-214ENST00000486515 WASHC2AQ641Q2 1341 aa9.51□□□□□ -0.89
UBR4-214ENST00000486515 HSPA6P17066 643 aa9.5□□□□□ -0.89
UBR4-214ENST00000486515 CABP1Q9NZU7 370 aa9.5□□□□□ -0.89
UBR4-214ENST00000486515 CHD2O14647 1828 aaKnown RBP9.49□□□□□ -0.89
UBR4-214ENST00000486515 DIEXFQ68CQ4 756 aaKnown RBP9.49□□□□□ -0.89
UBR4-214ENST00000486515 SEPT12Q8IYM1 358 aa9.49□□□□□ -0.89
UBR4-214ENST00000486515 DCCP43146 1447 aa9.48□□□□□ -0.89
UBR4-214ENST00000486515 C11orf95C9JLR9 678 aaPredicted RBP9.48□□□□□ -0.89
UBR4-214ENST00000486515 ANP32CO43423 234 aa9.48□□□□□ -0.89
UBR4-214ENST00000486515 KCNQ2O43526 872 aa9.48□□□□□ -0.89
UBR4-214ENST00000486515 MYT1Q01538 1121 aa9.48□□□□□ -0.89
UBR4-214ENST00000486515 PSME1Q06323 249 aa9.48□□□□□ -0.89
UBR4-214ENST00000486515 KRT27Q7Z3Y8 459 aa9.48□□□□□ -0.89
UBR4-214ENST00000486515 SLC12A5Q9H2X9 1139 aa9.48□□□□□ -0.89
UBR4-214ENST00000486515 PANK3Q9H999 370 aa9.48□□□□□ -0.89
UBR4-214ENST00000486515 PHF8Q9UPP1 1060 aa9.48□□□□□ -0.89
UBR4-214ENST00000486515 NALCNQ8IZF0 1738 aa9.48□□□□□ -0.89
UBR4-214ENST00000486515 ANKARQ7Z5J8 1434 aa9.48□□□□□ -0.89
UBR4-214ENST00000486515 ADRA2BP18089 450 aa9.47□□□□□ -0.89
UBR4-214ENST00000486515 PMFBP1Q8TBY8 1022 aa9.47□□□□□ -0.89
UBR4-214ENST00000486515 DDX17Q92841 729 aaKnown RBP9.47□□□□□ -0.89
UBR4-214ENST00000486515 PPIP5K1Q6PFW1 1433 aa9.47□□□□□ -0.89
UBR4-214ENST00000486515 PAK3O75914 559 aaPredicted RBP9.46□□□□□ -0.9
UBR4-214ENST00000486515 EZH2Q15910 746 aaKnown RBP9.46□□□□□ -0.9
UBR4-214ENST00000486515 TULP4Q9NRJ4 1543 aa9.46□□□□□ -0.9
UBR4-214ENST00000486515 PLEKHG3A1L390 1219 aa9.45□□□□□ -0.9
UBR4-214ENST00000486515 CNGB1Q14028 1251 aaPredicted RBP9.45□□□□□ -0.9
UBR4-214ENST00000486515 ACEP12821 1306 aa9.45□□□□□ -0.9
UBR4-214ENST00000486515 CGNL1Q0VF96 1302 aa9.45□□□□□ -0.9
UBR4-214ENST00000486515 NPHP3Q7Z494 1330 aa9.45□□□□□ -0.9
UBR4-214ENST00000486515 KTN1Q86UP2 1357 aaKnown RBP9.45□□□□□ -0.9
UBR4-214ENST00000486515 ANKRD36BQ8N2N9 1353 aa9.45□□□□□ -0.9
UBR4-214ENST00000486515 ADGRB2O60241 1585 aa9.45□□□□□ -0.9
UBR4-214ENST00000486515 MYOM1P52179 1685 aa9.45□□□□□ -0.9
UBR4-214ENST00000486515 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.45□□□□□ -0.9
UBR4-214ENST00000486515 LMOD2Q6P5Q4 547 aa9.44□□□□□ -0.9
UBR4-214ENST00000486515 PELP1Q8IZL8 1130 aaKnown RBP9.44□□□□□ -0.9
UBR4-214ENST00000486515 CDC42BPGQ6DT37 1551 aa9.44□□□□□ -0.9
UBR4-214ENST00000486515 C1orf167Q5SNV9 1468 aa9.43□□□□□ -0.9
UBR4-214ENST00000486515 PRR36Q9H6K5 1346 aa9.43□□□□□ -0.9
UBR4-214ENST00000486515 FOXO3O43524 673 aa9.43□□□□□ -0.9
UBR4-214ENST00000486515 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.43□□□□□ -0.9
UBR4-214ENST00000486515 ORAI2Q96SN7 254 aa9.43□□□□□ -0.9
UBR4-214ENST00000486515 ATP7BP35670 1465 aa9.42□□□□□ -0.9
UBR4-214ENST00000486515 FAM83GA6ND36 823 aa9.42□□□□□ -0.9
UBR4-214ENST00000486515 KRT28Q7Z3Y7 464 aa9.42□□□□□ -0.9
UBR4-214ENST00000486515 COG3Q96JB2 828 aa9.42□□□□□ -0.9
UBR4-214ENST00000486515 GLI3P10071 1580 aa9.41□□□□□ -0.9
UBR4-214ENST00000486515 DISP2A7MBM2 1401 aa9.41□□□□□ -0.9
UBR4-214ENST00000486515 A0A1W2PP64 1363 aa9.41□□□□□ -0.9
UBR4-214ENST00000486515 BRD4O60885 1362 aaPredicted RBP9.41□□□□□ -0.9
UBR4-214ENST00000486515 TTC21AQ8NDW8 1320 aa9.41□□□□□ -0.9
UBR4-214ENST00000486515 HAP1P54257 671 aaPredicted RBP9.41□□□□□ -0.9
UBR4-214ENST00000486515 CC2D1BQ5T0F9 858 aaKnown RBP9.41□□□□□ -0.9
UBR4-214ENST00000486515 MORC1Q86VD1 984 aa9.41□□□□□ -0.9
UBR4-214ENST00000486515 UNC5CLQ8IV45 518 aa9.41□□□□□ -0.9
UBR4-214ENST00000486515 MST1RQ04912 1400 aa9.4□□□□□ -0.9
UBR4-214ENST00000486515 EDC4Q6P2E9 1401 aaKnown RBP9.4□□□□□ -0.9
UBR4-214ENST00000486515 NSD3Q9BZ95 1437 aa9.4□□□□□ -0.9
UBR4-214ENST00000486515 RGPD8O14715 1765 aaPredicted RBP9.4□□□□□ -0.9
UBR4-214ENST00000486515 RALBP1Q15311 655 aa9.4□□□□□ -0.9
UBR4-214ENST00000486515 NBPF14Q5TI25 921 aa9.4□□□□□ -0.9
UBR4-214ENST00000486515 ABTB2Q8N961 1025 aa9.4□□□□□ -0.9
UBR4-214ENST00000486515 CAMKK2Q96RR4 588 aa9.4□□□□□ -0.9
UBR4-214ENST00000486515 USP32Q8NFA0 1604 aa9.4□□□□□ -0.9
UBR4-214ENST00000486515 FMN2Q9NZ56 1722 aa9.39□□□□□ -0.91
UBR4-214ENST00000486515 NSD2O96028 1365 aa9.39□□□□□ -0.91
UBR4-214ENST00000486515 TOPAZ1Q8N9V7 1692 aa9.39□□□□□ -0.91
UBR4-214ENST00000486515 NLRP13Q86W25 1043 aa9.39□□□□□ -0.91
UBR4-214ENST00000486515 BRWD3Q6RI45 1802 aa9.39□□□□□ -0.91
UBR4-214ENST00000486515 POLR3AO14802 1390 aaPredicted RBP9.38□□□□□ -0.91
UBR4-214ENST00000486515 TTC21BQ7Z4L5 1316 aa9.38□□□□□ -0.91
UBR4-214ENST00000486515 A0A0G2JS52 829 aa9.38□□□□□ -0.91
UBR4-214ENST00000486515 ONECUT3O60422 494 aaPredicted RBP9.38□□□□□ -0.91
UBR4-214ENST00000486515 NLRP6P59044 892 aa9.38□□□□□ -0.91
UBR4-214ENST00000486515 XPCQ01831 940 aaPredicted RBP9.38□□□□□ -0.91
UBR4-214ENST00000486515 USP6P35125 1406 aa9.38□□□□□ -0.91
UBR4-214ENST00000486515 CHD4Q14839 1912 aa9.37□□□□□ -0.91
UBR4-214ENST00000486515 SYT17Q9BSW7 474 aa9.37□□□□□ -0.91
UBR4-214ENST00000486515 CARD14Q9BXL6 1004 aa9.37□□□□□ -0.91
UBR4-214ENST00000486515 GGNBP2Q9H3C7 697 aa9.37□□□□□ -0.91
UBR4-214ENST00000486515 WWC3Q9ULE0 1092 aa9.37□□□□□ -0.91
UBR4-214ENST00000486515 CPSF1Q10570 1443 aaKnown RBP9.37□□□□□ -0.91
UBR4-214ENST00000486515 PER1O15534 1290 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms