RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 ST18O60284 1047 aa16.67■□□□□ 0.26
PKD1-219ENST00000486339 NOL8Q76FK4 1167 aaKnown RBP16.67■□□□□ 0.26
PKD1-219ENST00000486339 WWC1Q8IX03 1113 aa16.67■□□□□ 0.26
PKD1-219ENST00000486339 SLC4A2P04920 1241 aa16.66■□□□□ 0.26
PKD1-219ENST00000486339 CDK11BP21127 795 aaKnown RBP16.66■□□□□ 0.26
PKD1-219ENST00000486339 TOMM22Q9NS69 142 aa16.66■□□□□ 0.26
PKD1-219ENST00000486339 RIMS2Q9UQ26 1411 aa16.66■□□□□ 0.26
PKD1-219ENST00000486339 PIP4K2BP78356 416 aa16.65■□□□□ 0.26
PKD1-219ENST00000486339 RBM42Q9BTD8 480 aaKnown RBP16.65■□□□□ 0.26
PKD1-219ENST00000486339 CABP4P57796 275 aa16.65■□□□□ 0.26
PKD1-219ENST00000486339 HSP90B1P14625 803 aaKnown RBP16.65■□□□□ 0.26
PKD1-219ENST00000486339 NINLQ9Y2I6 1382 aa16.65■□□□□ 0.26
PKD1-219ENST00000486339 LRRFIP1Q32MZ4 808 aaKnown RBP16.64■□□□□ 0.25
PKD1-219ENST00000486339 NOB1Q9ULX3 412 aaKnown RBP16.64■□□□□ 0.25
PKD1-219ENST00000486339 ADGRL2O95490 1459 aa16.64■□□□□ 0.25
PKD1-219ENST00000486339 RUFY2Q8WXA3 655 aa16.63■□□□□ 0.25
PKD1-219ENST00000486339 REC8O95072 547 aa16.63■□□□□ 0.25
PKD1-219ENST00000486339 ACEP12821 1306 aa16.63■□□□□ 0.25
PKD1-219ENST00000486339 NSD2O96028 1365 aa16.63■□□□□ 0.25
PKD1-219ENST00000486339 ZMYM3Q14202 1370 aa16.63■□□□□ 0.25
PKD1-219ENST00000486339 PZPP20742 1482 aa16.63■□□□□ 0.25
PKD1-219ENST00000486339 THUMPD2Q9BTF0 503 aaKnown RBP16.62■□□□□ 0.25
PKD1-219ENST00000486339 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
PKD1-219ENST00000486339 ATP7AQ04656 1500 aa16.62■□□□□ 0.25
PKD1-219ENST00000486339 SLFN5Q08AF3 891 aa16.62■□□□□ 0.25
PKD1-219ENST00000486339 MAGI3Q5TCQ9 1506 aa16.61■□□□□ 0.25
PKD1-219ENST00000486339 CADPS2Q86UW7 1296 aa16.61■□□□□ 0.25
PKD1-219ENST00000486339 FOXD4L1Q9NU39 408 aa16.61■□□□□ 0.25
PKD1-219ENST00000486339 GLIPR1L2Q4G1C9 344 aa16.61■□□□□ 0.25
PKD1-219ENST00000486339 ZNF428Q96B54 188 aa16.61■□□□□ 0.25
PKD1-219ENST00000486339 GNAT3A8MTJ3 354 aa16.6■□□□□ 0.25
PKD1-219ENST00000486339 SURF6O75683 361 aaKnown RBP16.59■□□□□ 0.25
PKD1-219ENST00000486339 DMRT2Q9Y5R5 561 aa16.59■□□□□ 0.25
PKD1-219ENST00000486339 TULP1O00294 542 aaPredicted RBP16.59■□□□□ 0.25
PKD1-219ENST00000486339 KRT28Q7Z3Y7 464 aa16.59■□□□□ 0.25
PKD1-219ENST00000486339 ERC2O15083 957 aa16.58■□□□□ 0.25
PKD1-219ENST00000486339 MCM10Q7L590 875 aa16.58■□□□□ 0.25
PKD1-219ENST00000486339 ATP10AO60312 1499 aa16.58■□□□□ 0.24
PKD1-219ENST00000486339 HTATSF1O43719 755 aaKnown RBP16.58■□□□□ 0.24
PKD1-219ENST00000486339 TESK2Q96S53 571 aa16.58■□□□□ 0.24
PKD1-219ENST00000486339 C1orf115Q9H7X2 142 aa16.58■□□□□ 0.24
PKD1-219ENST00000486339 BTBD11A6QL63 1104 aa16.58■□□□□ 0.24
PKD1-219ENST00000486339 DEKP35659 375 aaKnown RBP16.58■□□□□ 0.24
PKD1-219ENST00000486339 DCTN1Q14203 1278 aa16.58■□□□□ 0.24
PKD1-219ENST00000486339 CLASRPQ8N2M8 674 aaKnown RBP16.58■□□□□ 0.24
PKD1-219ENST00000486339 ANO2Q9NQ90 1003 aa16.58■□□□□ 0.24
PKD1-219ENST00000486339 VPS37DQ86XT2 251 aa16.57■□□□□ 0.24
PKD1-219ENST00000486339 NEUROD6Q96NK8 337 aa16.57■□□□□ 0.24
PKD1-219ENST00000486339 GNAI2P04899 355 aa16.57■□□□□ 0.24
PKD1-219ENST00000486339 USHBP1Q8N6Y0 703 aa16.57■□□□□ 0.24
PKD1-219ENST00000486339 CCT4P50991 539 aaKnown RBP16.57■□□□□ 0.24
PKD1-219ENST00000486339 ABCC11Q96J66 1382 aa16.57■□□□□ 0.24
PKD1-219ENST00000486339 ZKSCAN1P17029 563 aaPredicted RBP16.56■□□□□ 0.24
PKD1-219ENST00000486339 SRCIN1Q9C0H9 1055 aa16.56■□□□□ 0.24
PKD1-219ENST00000486339 ANKRD36BQ8N2N9 1353 aa16.56■□□□□ 0.24
PKD1-219ENST00000486339 KIF6Q6ZMV9 814 aa16.56■□□□□ 0.24
PKD1-219ENST00000486339 KIF3AQ9Y496 699 aa16.56■□□□□ 0.24
PKD1-219ENST00000486339 PTMSP20962 102 aa16.56■□□□□ 0.24
PKD1-219ENST00000486339 NEO1Q92859 1461 aa16.56■□□□□ 0.24
PKD1-219ENST00000486339 FYB1O15117 783 aa16.56■□□□□ 0.24
PKD1-219ENST00000486339 ABCA8O94911 1581 aa16.56■□□□□ 0.24
PKD1-219ENST00000486339 AMER1Q5JTC6 1135 aaPredicted RBP16.56■□□□□ 0.24
PKD1-219ENST00000486339 ARHGEF12Q9NZN5 1544 aa16.55■□□□□ 0.24
PKD1-219ENST00000486339 FAM177BA6PVY3 158 aa16.55■□□□□ 0.24
PKD1-219ENST00000486339 INTS3Q68E01 1043 aaKnown RBP16.55■□□□□ 0.24
PKD1-219ENST00000486339 MVPQ14764 893 aaKnown RBP16.55■□□□□ 0.24
PKD1-219ENST00000486339 MIS18AQ9NYP9 233 aa16.54■□□□□ 0.24
PKD1-219ENST00000486339 LRPPRCP42704 1394 aaKnown RBP16.54■□□□□ 0.24
PKD1-219ENST00000486339 AMOTQ4VCS5 1084 aa16.54■□□□□ 0.24
PKD1-219ENST00000486339 TTC21BQ7Z4L5 1316 aa16.54■□□□□ 0.24
PKD1-219ENST00000486339 MYL6BP14649 208 aa16.53■□□□□ 0.24
PKD1-219ENST00000486339 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
PKD1-219ENST00000486339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.53■□□□□ 0.24
PKD1-219ENST00000486339 PDZRN3Q9UPQ7 1066 aa16.53■□□□□ 0.24
PKD1-219ENST00000486339 FBLN1P23142 703 aa16.53■□□□□ 0.24
PKD1-219ENST00000486339 GZF1Q9H116 711 aaPredicted RBP16.53■□□□□ 0.24
PKD1-219ENST00000486339 RTN4Q9NQC3 1192 aaKnown RBP16.53■□□□□ 0.24
PKD1-219ENST00000486339 DUSP27Q5VZP5 1158 aa16.52■□□□□ 0.24
PKD1-219ENST00000486339 PUS7Q96PZ0 661 aaKnown RBP16.52■□□□□ 0.24
PKD1-219ENST00000486339 IFT57Q9NWB7 429 aa16.52■□□□□ 0.24
PKD1-219ENST00000486339 APPP05067 770 aa16.52■□□□□ 0.24
PKD1-219ENST00000486339 GCC1Q96CN9 775 aa16.52■□□□□ 0.24
PKD1-219ENST00000486339 TTC21AQ8NDW8 1320 aa16.51■□□□□ 0.23
PKD1-219ENST00000486339 TBX22Q9Y458 520 aa16.51■□□□□ 0.23
PKD1-219ENST00000486339 MSH6P52701 1360 aa16.51■□□□□ 0.23
PKD1-219ENST00000486339 TAF7Q15545 349 aaPredicted RBP16.51■□□□□ 0.23
PKD1-219ENST00000486339 RNF20Q5VTR2 975 aa16.51■□□□□ 0.23
PKD1-219ENST00000486339 NOL10Q9BSC4 688 aaKnown RBP16.51■□□□□ 0.23
PKD1-219ENST00000486339 EIF2AK4Q9P2K8 1649 aaKnown RBP16.51■□□□□ 0.23
PKD1-219ENST00000486339 PPIP5K1Q6PFW1 1433 aa16.5■□□□□ 0.23
PKD1-219ENST00000486339 DNTTIP2Q5QJE6 756 aaKnown RBP16.5■□□□□ 0.23
PKD1-219ENST00000486339 GOLGA6L6A8MZA4 724 aa16.5■□□□□ 0.23
PKD1-219ENST00000486339 ADAMTS2O95450 1211 aa16.5■□□□□ 0.23
PKD1-219ENST00000486339 NRDCO43847 1150 aa16.5■□□□□ 0.23
PKD1-219ENST00000486339 CDC45O75419 566 aa16.5■□□□□ 0.23
PKD1-219ENST00000486339 HSPA2P54652 639 aa16.5■□□□□ 0.23
PKD1-219ENST00000486339 MAST1Q9Y2H9 1570 aa16.5■□□□□ 0.23
PKD1-219ENST00000486339 KCNA6P17658 529 aa16.5■□□□□ 0.23
PKD1-219ENST00000486339 MBD5Q9P267 1494 aa16.5■□□□□ 0.23
PKD1-219ENST00000486339 L1TD1Q5T7N2 865 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms