RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 PRR36Q9H6K5 1346 aa25.74■■□□□ 1.71
MCF2L-226ENST00000486210 THSD7AQ9UPZ6 1657 aa25.74■■□□□ 1.71
MCF2L-226ENST00000486210 TNS1Q9HBL0 1735 aaKnown RBP25.73■■□□□ 1.71
MCF2L-226ENST00000486210 FAM182BQ5T319 152 aa25.72■■□□□ 1.71
MCF2L-226ENST00000486210 HIRIP3Q9BW71 556 aaPredicted RBP25.72■■□□□ 1.71
MCF2L-226ENST00000486210 TULP4Q9NRJ4 1543 aa25.72■■□□□ 1.71
MCF2L-226ENST00000486210 SPATA31A5Q5VU36 1347 aa25.7■■□□□ 1.71
MCF2L-226ENST00000486210 SPATA31A7Q8IWB4 1347 aa25.7■■□□□ 1.71
MCF2L-226ENST00000486210 EN1Q05925 392 aaPredicted RBP25.7■■□□□ 1.7
MCF2L-226ENST00000486210 GPRASP1Q5JY77 1395 aa25.69■■□□□ 1.7
MCF2L-226ENST00000486210 TRAK1Q9UPV9 953 aa25.69■■□□□ 1.7
MCF2L-226ENST00000486210 MINK1Q8N4C8 1332 aaPredicted RBP25.68■■□□□ 1.7
MCF2L-226ENST00000486210 DISP2A7MBM2 1401 aa25.66■■□□□ 1.7
MCF2L-226ENST00000486210 WASLO00401 505 aaPredicted RBP25.64■■□□□ 1.7
MCF2L-226ENST00000486210 EIF3AQ14152 1382 aaKnown RBP25.64■■□□□ 1.69
MCF2L-226ENST00000486210 PHRF1Q9P1Y6 1649 aaKnown RBP25.63■■□□□ 1.69
MCF2L-226ENST00000486210 ITSN1Q15811 1721 aa25.61■■□□□ 1.69
MCF2L-226ENST00000486210 ARHGEF28Q8N1W1 1705 aaKnown RBP25.61■■□□□ 1.69
MCF2L-226ENST00000486210 R3HDM1Q15032 1099 aaKnown RBP25.61■■□□□ 1.69
MCF2L-226ENST00000486210 EZH2Q15910 746 aaKnown RBP25.6■■□□□ 1.69
MCF2L-226ENST00000486210 NGDNQ8NEJ9 315 aaKnown RBP25.6■■□□□ 1.69
MCF2L-226ENST00000486210 PRDM11Q9NQV5 511 aa25.6■■□□□ 1.69
MCF2L-226ENST00000486210 ATP7BP35670 1465 aa25.6■■□□□ 1.69
MCF2L-226ENST00000486210 PAK3O75914 559 aaPredicted RBP25.59■■□□□ 1.69
MCF2L-226ENST00000486210 SPATA31A1Q5TZJ5 1347 aa25.59■■□□□ 1.69
MCF2L-226ENST00000486210 KIAA0232Q92628 1395 aa25.57■■□□□ 1.68
MCF2L-226ENST00000486210 CHRNA2Q15822 529 aa25.56■■□□□ 1.68
MCF2L-226ENST00000486210 KDM2AQ9Y2K7 1162 aa25.56■■□□□ 1.68
MCF2L-226ENST00000486210 CAMKK2Q96RR4 588 aa25.55■■□□□ 1.68
MCF2L-226ENST00000486210 DCAF11Q8TEB1 546 aa25.54■■□□□ 1.68
MCF2L-226ENST00000486210 TOPAZ1Q8N9V7 1692 aa25.53■■□□□ 1.68
MCF2L-226ENST00000486210 RREB1Q92766 1687 aa25.53■■□□□ 1.68
MCF2L-226ENST00000486210 TRIM37O94972 964 aa25.53■■□□□ 1.68
MCF2L-226ENST00000486210 NUDT16Q96DE0 195 aaKnown RBP25.52■■□□□ 1.68
MCF2L-226ENST00000486210 STRN4Q9NRL3 753 aa25.52■■□□□ 1.68
MCF2L-226ENST00000486210 ZC3H6P61129 1189 aaKnown RBP25.5■■□□□ 1.67
MCF2L-226ENST00000486210 NUP188Q5SRE5 1749 aa25.5■■□□□ 1.67
MCF2L-226ENST00000486210 FAM196AQ6ZSG2 479 aa25.5■■□□□ 1.67
MCF2L-226ENST00000486210 NRKQ7Z2Y5 1582 aa25.5■■□□□ 1.67
MCF2L-226ENST00000486210 SSH2Q76I76 1423 aa25.48■■□□□ 1.67
MCF2L-226ENST00000486210 NUTM2GQ5VZR2 741 aa25.48■■□□□ 1.67
MCF2L-226ENST00000486210 LMO7Q8WWI1 1683 aa25.48■■□□□ 1.67
MCF2L-226ENST00000486210 POLR3AO14802 1390 aaPredicted RBP25.47■■□□□ 1.67
MCF2L-226ENST00000486210 APBA3O96018 575 aa25.47■■□□□ 1.67
MCF2L-226ENST00000486210 CAMTA1Q9Y6Y1 1673 aa25.47■■□□□ 1.67
MCF2L-226ENST00000486210 USP35Q9P2H5 1018 aa25.46■■□□□ 1.67
MCF2L-226ENST00000486210 PARD3Q8TEW0 1356 aa25.45■■□□□ 1.67
MCF2L-226ENST00000486210 BARGINQ6ZT62 677 aa25.45■■□□□ 1.66
MCF2L-226ENST00000486210 STAC3Q96MF2 364 aa25.44■■□□□ 1.66
MCF2L-226ENST00000486210 CDK19Q9BWU1 502 aa25.44■■□□□ 1.66
MCF2L-226ENST00000486210 ACEP12821 1306 aa25.43■■□□□ 1.66
MCF2L-226ENST00000486210 NBPF8Q3BBV2 869 aa25.42■■□□□ 1.66
MCF2L-226ENST00000486210 LARP1Q6PKG0 1096 aaKnown RBP25.41■■□□□ 1.66
MCF2L-226ENST00000486210 SIN3AQ96ST3 1273 aa25.4■■□□□ 1.66
MCF2L-226ENST00000486210 EVA1CP58658 441 aa25.39■■□□□ 1.66
MCF2L-226ENST00000486210 PDE3BQ13370 1112 aa25.39■■□□□ 1.66
MCF2L-226ENST00000486210 PARP4Q9UKK3 1724 aaKnown RBP25.39■■□□□ 1.65
MCF2L-226ENST00000486210 CPDO75976 1380 aa25.39■■□□□ 1.65
MCF2L-226ENST00000486210 USP19O94966 1318 aa25.38■■□□□ 1.65
MCF2L-226ENST00000486210 PLEKHG3A1L390 1219 aa25.38■■□□□ 1.65
MCF2L-226ENST00000486210 CCDC61Q9Y6R9 512 aa25.38■■□□□ 1.65
MCF2L-226ENST00000486210 TCP11L2Q8N4U5 519 aa25.37■■□□□ 1.65
MCF2L-226ENST00000486210 KIAA1210Q9ULL0 1709 aa25.37■■□□□ 1.65
MCF2L-226ENST00000486210 ABTB2Q8N961 1025 aa25.36■■□□□ 1.65
MCF2L-226ENST00000486210 CCER1Q8TC90 406 aaPredicted RBP25.36■■□□□ 1.65
MCF2L-226ENST00000486210 PEAK1Q9H792 1746 aa25.34■■□□□ 1.65
MCF2L-226ENST00000486210 COL5A2P05997 1499 aaPredicted RBP25.34■■□□□ 1.65
MCF2L-226ENST00000486210 THRAP3Q9Y2W1 955 aaKnown RBP25.32■■□□□ 1.64
MCF2L-226ENST00000486210 SBF2Q86WG5 1849 aa25.32■■□□□ 1.64
MCF2L-226ENST00000486210 GCP02774 474 aa25.31■■□□□ 1.64
MCF2L-226ENST00000486210 NEUROD1Q13562 356 aa25.31■■□□□ 1.64
MCF2L-226ENST00000486210 NBPF14Q5TI25 921 aa25.31■■□□□ 1.64
MCF2L-226ENST00000486210 LRRC37A3O60309 1634 aa25.3■■□□□ 1.64
MCF2L-226ENST00000486210 RGPD3A6NKT7 1758 aaPredicted RBP25.29■■□□□ 1.64
MCF2L-226ENST00000486210 RGPD4Q7Z3J3 1758 aa25.29■■□□□ 1.64
MCF2L-226ENST00000486210 PPIP5K1Q6PFW1 1433 aa25.29■■□□□ 1.64
MCF2L-226ENST00000486210 NLRP13Q86W25 1043 aa25.28■■□□□ 1.64
MCF2L-226ENST00000486210 CRB1P82279 1406 aa25.28■■□□□ 1.64
MCF2L-226ENST00000486210 NBPF1Q3BBV0 1214 aa25.27■■□□□ 1.64
MCF2L-226ENST00000486210 YY1P25490 414 aa25.26■■□□□ 1.63
MCF2L-226ENST00000486210 COL18A1P39060 1754 aa25.26■■□□□ 1.63
MCF2L-226ENST00000486210 WNK3Q9BYP7 1800 aa25.26■■□□□ 1.63
MCF2L-226ENST00000486210 OVOS2A0A0G2JMS6 1433 aa25.25■■□□□ 1.63
MCF2L-226ENST00000486210 OVOS2A0A0J9YW53 1432 aa25.25■■□□□ 1.63
MCF2L-226ENST00000486210 OVOS2Q6IE36 1432 aa25.25■■□□□ 1.63
MCF2L-226ENST00000486210 SLIT3O75094 1523 aa25.25■■□□□ 1.63
MCF2L-226ENST00000486210 CLSPNQ9HAW4 1339 aa25.24■■□□□ 1.63
MCF2L-226ENST00000486210 KCNQ2O43526 872 aa25.24■■□□□ 1.63
MCF2L-226ENST00000486210 SPON1Q9HCB6 807 aa25.24■■□□□ 1.63
MCF2L-226ENST00000486210 CASZ1Q86V15 1759 aa25.23■■□□□ 1.63
MCF2L-226ENST00000486210 CABP2Q9NPB3 220 aa25.23■■□□□ 1.63
MCF2L-226ENST00000486210 QRICH2Q9H0J4 1663 aa25.23■■□□□ 1.63
MCF2L-226ENST00000486210 SRPK2P78362 688 aaKnown RBP25.22■■□□□ 1.63
MCF2L-226ENST00000486210 USP6P35125 1406 aa25.21■■□□□ 1.63
MCF2L-226ENST00000486210 BRD4O60885 1362 aaPredicted RBP25.21■■□□□ 1.63
MCF2L-226ENST00000486210 PIK3C2AO00443 1686 aa25.21■■□□□ 1.63
MCF2L-226ENST00000486210 AATKQ6ZMQ8 1374 aa25.2■■□□□ 1.63
MCF2L-226ENST00000486210 C11orf95C9JLR9 678 aaPredicted RBP25.2■■□□□ 1.62
MCF2L-226ENST00000486210 PLSCR1O15162 318 aa25.2■■□□□ 1.62
MCF2L-226ENST00000486210 PTF1AQ7RTS3 328 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms