RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 POLR3GLQ9BT43 218 aa25.61■■□□□ 1.69
ERCC2-205ENST00000485403 SSH2Q76I76 1423 aa25.61■■□□□ 1.69
ERCC2-205ENST00000485403 TMC1Q8TDI8 760 aa25.6■■□□□ 1.69
ERCC2-205ENST00000485403 ZNF692Q9BU19 519 aaPredicted RBP25.6■■□□□ 1.69
ERCC2-205ENST00000485403 NRKQ7Z2Y5 1582 aa25.6■■□□□ 1.69
ERCC2-205ENST00000485403 SPATA31A6Q5VVP1 1343 aa25.58■■□□□ 1.69
ERCC2-205ENST00000485403 ARHGEF10O15013 1369 aa25.58■■□□□ 1.68
ERCC2-205ENST00000485403 A0A1W2PP64 1363 aa25.57■■□□□ 1.68
ERCC2-205ENST00000485403 DDX10Q13206 875 aaKnown RBP25.56■■□□□ 1.68
ERCC2-205ENST00000485403 KTN1Q86UP2 1357 aaKnown RBP25.55■■□□□ 1.68
ERCC2-205ENST00000485403 TERF2IPQ9NYB0 399 aa25.55■■□□□ 1.68
ERCC2-205ENST00000485403 ANKRD36BQ8N2N9 1353 aa25.54■■□□□ 1.68
ERCC2-205ENST00000485403 MED1Q15648 1581 aaPredicted RBP25.54■■□□□ 1.68
ERCC2-205ENST00000485403 PAK3O75914 559 aaPredicted RBP25.53■■□□□ 1.68
ERCC2-205ENST00000485403 HDGFL2Q7Z4V5 671 aaPredicted RBP25.53■■□□□ 1.68
ERCC2-205ENST00000485403 LRP6O75581 1613 aa25.53■■□□□ 1.68
ERCC2-205ENST00000485403 ABCA3Q99758 1704 aa25.52■■□□□ 1.68
ERCC2-205ENST00000485403 CRYBG1Q9Y4K1 1723 aa25.52■■□□□ 1.68
ERCC2-205ENST00000485403 EDC4Q6P2E9 1401 aaKnown RBP25.51■■□□□ 1.67
ERCC2-205ENST00000485403 DIEXFQ68CQ4 756 aaKnown RBP25.51■■□□□ 1.67
ERCC2-205ENST00000485403 PIK3C2AO00443 1686 aa25.51■■□□□ 1.67
ERCC2-205ENST00000485403 TTC21BQ7Z4L5 1316 aa25.5■■□□□ 1.67
ERCC2-205ENST00000485403 LMOD2Q6P5Q4 547 aa25.49■■□□□ 1.67
ERCC2-205ENST00000485403 TTC21AQ8NDW8 1320 aa25.49■■□□□ 1.67
ERCC2-205ENST00000485403 ABTB2Q8N961 1025 aa25.47■■□□□ 1.67
ERCC2-205ENST00000485403 MARF1Q9Y4F3 1742 aaKnown RBP25.45■■□□□ 1.67
ERCC2-205ENST00000485403 USP54Q70EL1 1684 aa25.45■■□□□ 1.66
ERCC2-205ENST00000485403 PHRF1Q9P1Y6 1649 aaKnown RBP25.45■■□□□ 1.66
ERCC2-205ENST00000485403 NUTM2BA6NNL0 878 aaPredicted RBP25.44■■□□□ 1.66
ERCC2-205ENST00000485403 NUTM2EB1AL46 878 aaPredicted RBP25.44■■□□□ 1.66
ERCC2-205ENST00000485403 NUTM2AQ8IVF1 878 aaPredicted RBP25.44■■□□□ 1.66
ERCC2-205ENST00000485403 CABLES1Q8TDN4 633 aa25.43■■□□□ 1.66
ERCC2-205ENST00000485403 USP19O94966 1318 aa25.43■■□□□ 1.66
ERCC2-205ENST00000485403 NUTM2GQ5VZR2 741 aa25.41■■□□□ 1.66
ERCC2-205ENST00000485403 NLRP13Q86W25 1043 aa25.41■■□□□ 1.66
ERCC2-205ENST00000485403 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.41■■□□□ 1.66
ERCC2-205ENST00000485403 CARD14Q9BXL6 1004 aa25.41■■□□□ 1.66
ERCC2-205ENST00000485403 USP31Q70CQ4 1352 aa25.41■■□□□ 1.66
ERCC2-205ENST00000485403 SLIT3O75094 1523 aa25.39■■□□□ 1.66
ERCC2-205ENST00000485403 NLRP6P59044 892 aa25.39■■□□□ 1.66
ERCC2-205ENST00000485403 NME9Q86XW9 330 aa25.38■■□□□ 1.65
ERCC2-205ENST00000485403 NSD3Q9BZ95 1437 aa25.38■■□□□ 1.65
ERCC2-205ENST00000485403 KIF20BQ96Q89 1820 aa25.37■■□□□ 1.65
ERCC2-205ENST00000485403 ADAMTS2O95450 1211 aa25.37■■□□□ 1.65
ERCC2-205ENST00000485403 OVOS2A0A0J9YW53 1432 aa25.36■■□□□ 1.65
ERCC2-205ENST00000485403 OVOS2Q6IE36 1432 aa25.36■■□□□ 1.65
ERCC2-205ENST00000485403 PANK3Q9H999 370 aa25.36■■□□□ 1.65
ERCC2-205ENST00000485403 PLEKHG5O94827 1062 aa25.35■■□□□ 1.65
ERCC2-205ENST00000485403 HAP1P54257 671 aaPredicted RBP25.35■■□□□ 1.65
ERCC2-205ENST00000485403 MEX3CQ5U5Q3 659 aaKnown RBP25.35■■□□□ 1.65
ERCC2-205ENST00000485403 ZRANB1Q9UGI0 708 aa25.33■■□□□ 1.65
ERCC2-205ENST00000485403 FYB1O15117 783 aa25.32■■□□□ 1.64
ERCC2-205ENST00000485403 GCP02774 474 aa25.32■■□□□ 1.64
ERCC2-205ENST00000485403 C8orf37Q96NL8 207 aa25.31■■□□□ 1.64
ERCC2-205ENST00000485403 CPDO75976 1380 aa25.3■■□□□ 1.64
ERCC2-205ENST00000485403 NFAT5O94916 1531 aa25.3■■□□□ 1.64
ERCC2-205ENST00000485403 COL14A1Q05707 1796 aaKnown RBP25.29■■□□□ 1.64
ERCC2-205ENST00000485403 CGNL1Q0VF96 1302 aa25.29■■□□□ 1.64
ERCC2-205ENST00000485403 PLCH1Q4KWH8 1693 aa25.28■■□□□ 1.64
ERCC2-205ENST00000485403 SLIT2O94813 1529 aa25.28■■□□□ 1.64
ERCC2-205ENST00000485403 FNBP4Q8N3X1 1017 aaPredicted RBP25.28■■□□□ 1.64
ERCC2-205ENST00000485403 KCNH5Q8NCM2 988 aa25.28■■□□□ 1.64
ERCC2-205ENST00000485403 KIAA0232Q92628 1395 aa25.28■■□□□ 1.64
ERCC2-205ENST00000485403 NWD2Q9ULI1 1742 aa25.28■■□□□ 1.64
ERCC2-205ENST00000485403 NGLY1Q96IV0 654 aa25.27■■□□□ 1.64
ERCC2-205ENST00000485403 RGS17Q9UGC6 210 aaPredicted RBP25.27■■□□□ 1.64
ERCC2-205ENST00000485403 ANKRD26Q9UPS8 1709 aa25.27■■□□□ 1.64
ERCC2-205ENST00000485403 FAM83GA6ND36 823 aa25.27■■□□□ 1.64
ERCC2-205ENST00000485403 AFF2P51816 1311 aa25.26■■□□□ 1.63
ERCC2-205ENST00000485403 COG3Q96JB2 828 aa25.26■■□□□ 1.63
ERCC2-205ENST00000485403 PHF23Q9BUL5 403 aaPredicted RBP25.26■■□□□ 1.63
ERCC2-205ENST00000485403 GGNBP2Q9H3C7 697 aa25.26■■□□□ 1.63
ERCC2-205ENST00000485403 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.25■■□□□ 1.63
ERCC2-205ENST00000485403 PER1O15534 1290 aaPredicted RBP25.25■■□□□ 1.63
ERCC2-205ENST00000485403 ZC3H6P61129 1189 aaKnown RBP25.25■■□□□ 1.63
ERCC2-205ENST00000485403 PRDM11Q9NQV5 511 aa25.24■■□□□ 1.63
ERCC2-205ENST00000485403 LMO7Q8WWI1 1683 aa25.23■■□□□ 1.63
ERCC2-205ENST00000485403 BCL9LQ86UU0 1499 aa25.23■■□□□ 1.63
ERCC2-205ENST00000485403 COL18A1P39060 1754 aa25.23■■□□□ 1.63
ERCC2-205ENST00000485403 ANP32CO43423 234 aa25.22■■□□□ 1.63
ERCC2-205ENST00000485403 KNSTRNQ9Y448 316 aa25.22■■□□□ 1.63
ERCC2-205ENST00000485403 LTN1O94822 1766 aa25.22■■□□□ 1.63
ERCC2-205ENST00000485403 NSD2O96028 1365 aa25.22■■□□□ 1.63
ERCC2-205ENST00000485403 ARHGEF25Q86VW2 580 aa25.22■■□□□ 1.63
ERCC2-205ENST00000485403 NRAPQ86VF7 1730 aa25.21■■□□□ 1.63
ERCC2-205ENST00000485403 ZNF772Q68DY9 489 aaPredicted RBP25.21■■□□□ 1.63
ERCC2-205ENST00000485403 ABCC6O95255 1503 aa25.2■■□□□ 1.62
ERCC2-205ENST00000485403 AMER1Q5JTC6 1135 aaPredicted RBP25.2■■□□□ 1.62
ERCC2-205ENST00000485403 AATKQ6ZMQ8 1374 aa25.2■■□□□ 1.62
ERCC2-205ENST00000485403 SOX12O15370 315 aa25.19■■□□□ 1.62
ERCC2-205ENST00000485403 CHRNA2Q15822 529 aa25.19■■□□□ 1.62
ERCC2-205ENST00000485403 USP21Q9UK80 565 aa25.19■■□□□ 1.62
ERCC2-205ENST00000485403 MIER1Q8N108 512 aa25.18■■□□□ 1.62
ERCC2-205ENST00000485403 CAMTA1Q9Y6Y1 1673 aa25.18■■□□□ 1.62
ERCC2-205ENST00000485403 UNC5CLQ8IV45 518 aa25.17■■□□□ 1.62
ERCC2-205ENST00000485403 BTG4Q9NY30 223 aa25.17■■□□□ 1.62
ERCC2-205ENST00000485403 NPC1L1Q9UHC9 1359 aa25.16■■□□□ 1.62
ERCC2-205ENST00000485403 ATRNO75882 1429 aa25.15■■□□□ 1.62
ERCC2-205ENST00000485403 CNGB1Q14028 1251 aaPredicted RBP25.15■■□□□ 1.62
ERCC2-205ENST00000485403 RGPD5Q99666 1765 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms