RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 SOX11P35716 441 aa7.66□□□□□ -1.18
XPA-203ENST00000485042 CFAP70Q5T0N1 1121 aa7.66□□□□□ -1.18
XPA-203ENST00000485042 NPM2Q86SE8 214 aaKnown RBP7.66□□□□□ -1.18
XPA-203ENST00000485042 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.66□□□□□ -1.18
XPA-203ENST00000485042 SEMA3FQ13275 785 aa7.65□□□□□ -1.18
XPA-203ENST00000485042 PRR14Q9BWN1 585 aa7.65□□□□□ -1.18
XPA-203ENST00000485042 PALM3A6NDB9 673 aaPredicted RBP7.64□□□□□ -1.19
XPA-203ENST00000485042 CSB-PGBD3P0DP91 1061 aa7.64□□□□□ -1.19
XPA-203ENST00000485042 LMOD1P29536 600 aaPredicted RBP7.64□□□□□ -1.19
XPA-203ENST00000485042 DESI1Q6ICB0 168 aa7.64□□□□□ -1.19
XPA-203ENST00000485042 TFIP11Q9UBB9 837 aaKnown RBP7.64□□□□□ -1.19
XPA-203ENST00000485042 EIF4G2P78344 907 aaKnown RBP eCLIP7.63□□□□□ -1.19
XPA-203ENST00000485042 LYPD8Q6UX82 237 aa7.62□□□□□ -1.19
XPA-203ENST00000485042 USB1Q9BQ65 265 aaKnown RBP7.62□□□□□ -1.19
XPA-203ENST00000485042 NRG2O14511 850 aaPredicted RBP7.61□□□□□ -1.19
XPA-203ENST00000485042 PPP4CP60510 307 aa7.61□□□□□ -1.19
XPA-203ENST00000485042 BLOC1S3Q6QNY0 202 aa7.61□□□□□ -1.19
XPA-203ENST00000485042 RNF19BQ6ZMZ0 732 aa7.61□□□□□ -1.19
XPA-203ENST00000485042 UCN2Q96RP3 112 aa7.61□□□□□ -1.19
XPA-203ENST00000485042 GZF1Q9H116 711 aaPredicted RBP7.61□□□□□ -1.19
XPA-203ENST00000485042 SRPK2P78362 688 aaKnown RBP7.6□□□□□ -1.19
XPA-203ENST00000485042 CDCA8Q53HL2 280 aa7.6□□□□□ -1.19
XPA-203ENST00000485042 USTQ9Y2C2 406 aa7.6□□□□□ -1.19
XPA-203ENST00000485042 NR1H3Q13133 447 aa7.59□□□□□ -1.19
XPA-203ENST00000485042 BRICD5Q6PL45 260 aa7.59□□□□□ -1.19
XPA-203ENST00000485042 TSR3Q9UJK0 312 aaKnown RBP7.59□□□□□ -1.19
XPA-203ENST00000485042 HPS5Q9UPZ3 1129 aa7.59□□□□□ -1.19
XPA-203ENST00000485042 ZBBXA8MT70 800 aa7.58□□□□□ -1.2
XPA-203ENST00000485042 PATL2C9JE40 543 aaKnown RBP7.58□□□□□ -1.2
XPA-203ENST00000485042 NR1I2O75469 434 aa7.58□□□□□ -1.2
XPA-203ENST00000485042 FMNL1O95466 1100 aaPredicted RBP7.58□□□□□ -1.2
XPA-203ENST00000485042 TMCO4Q5TGY1 634 aa7.58□□□□□ -1.2
XPA-203ENST00000485042 PRKD2Q9BZL6 878 aa7.58□□□□□ -1.2
XPA-203ENST00000485042 SALL2Q9Y467 1007 aaPredicted RBP7.58□□□□□ -1.2
XPA-203ENST00000485042 PCDHB3Q9Y5E6 796 aa7.58□□□□□ -1.2
XPA-203ENST00000485042 MAFBQ9Y5Q3 323 aaPredicted RBP7.58□□□□□ -1.2
XPA-203ENST00000485042 BRD1O95696 1058 aa7.57□□□□□ -1.2
XPA-203ENST00000485042 FBXO45P0C2W1 286 aa7.57□□□□□ -1.2
XPA-203ENST00000485042 APLP1P51693 650 aa7.57□□□□□ -1.2
XPA-203ENST00000485042 ZNF787Q6DD87 383 aa7.57□□□□□ -1.2
XPA-203ENST00000485042 TBC1D9Q6ZT07 1266 aa7.57□□□□□ -1.2
XPA-203ENST00000485042 SCUBE3Q8IX30 993 aa7.57□□□□□ -1.2
XPA-203ENST00000485042 FKBPLQ9UIM3 349 aa7.57□□□□□ -1.2
XPA-203ENST00000485042 ATP9BO43861 1147 aa7.56□□□□□ -1.2
XPA-203ENST00000485042 JUNDP17535 347 aa7.56□□□□□ -1.2
XPA-203ENST00000485042 CTHP32929 405 aa7.56□□□□□ -1.2
XPA-203ENST00000485042 MAP10Q9P2G4 905 aa7.56□□□□□ -1.2
XPA-203ENST00000485042 CARNS1A5YM72 827 aa7.55□□□□□ -1.2
XPA-203ENST00000485042 ATG7O95352 703 aa7.55□□□□□ -1.2
XPA-203ENST00000485042 KCNA1Q09470 495 aa7.55□□□□□ -1.2
XPA-203ENST00000485042 VRTNQ9H8Y1 702 aa7.55□□□□□ -1.2
XPA-203ENST00000485042 F12P00748 615 aaPredicted RBP7.54□□□□□ -1.2
XPA-203ENST00000485042 PTPRNQ16849 979 aa7.54□□□□□ -1.2
XPA-203ENST00000485042 THAP11Q96EK4 314 aa7.54□□□□□ -1.2
XPA-203ENST00000485042 ZC3H4Q9UPT8 1303 aaKnown RBP7.53□□□□□ -1.2
XPA-203ENST00000485042 ZNF775Q96BV0 537 aaPredicted RBP7.53□□□□□ -1.2
XPA-203ENST00000485042 V9GY48 417 aaPredicted RBP7.53□□□□□ -1.2
XPA-203ENST00000485042 SKIP12755 728 aa7.52□□□□□ -1.21
XPA-203ENST00000485042 MFAP1P55081 439 aaKnown RBP7.52□□□□□ -1.21
XPA-203ENST00000485042 TJAP1Q5JTD0 557 aa7.52□□□□□ -1.21
XPA-203ENST00000485042 PIK3CDO00329 1044 aa7.51□□□□□ -1.21
XPA-203ENST00000485042 PTK2Q05397 1052 aa7.51□□□□□ -1.21
XPA-203ENST00000485042 NFATC2IPQ8NCF5 419 aa7.51□□□□□ -1.21
XPA-203ENST00000485042 CCNYL3P0C7X3 344 aa7.5□□□□□ -1.21
XPA-203ENST00000485042 KANK4Q5T7N3 995 aaPredicted RBP7.5□□□□□ -1.21
XPA-203ENST00000485042 PPP1R18Q6NYC8 613 aa7.5□□□□□ -1.21
XPA-203ENST00000485042 ARMC2Q8NEN0 867 aa7.5□□□□□ -1.21
XPA-203ENST00000485042 ZNF592Q92610 1267 aa7.5□□□□□ -1.21
XPA-203ENST00000485042 SPSB2Q99619 263 aa7.5□□□□□ -1.21
XPA-203ENST00000485042 NUDT12Q9BQG2 462 aa7.5□□□□□ -1.21
XPA-203ENST00000485042 USP17L3A6NCW0 530 aa7.49□□□□□ -1.21
XPA-203ENST00000485042 USP17L4A6NCW7 530 aa7.49□□□□□ -1.21
XPA-203ENST00000485042 TMEM88BA6NKF7 163 aa7.49□□□□□ -1.21
XPA-203ENST00000485042 USP17L5A8MUK1 530 aa7.49□□□□□ -1.21
XPA-203ENST00000485042 COPS2P61201 443 aa7.49□□□□□ -1.21
XPA-203ENST00000485042 SLFNL1Q499Z3 407 aa7.49□□□□□ -1.21
XPA-203ENST00000485042 MSS51Q4VC12 460 aa7.49□□□□□ -1.21
XPA-203ENST00000485042 USP17L2Q6R6M4 530 aa7.49□□□□□ -1.21
XPA-203ENST00000485042 USP17L1Q7RTZ2 530 aa7.49□□□□□ -1.21
XPA-203ENST00000485042 EVA1BQ9NVM1 165 aa7.49□□□□□ -1.21
XPA-203ENST00000485042 DXOO77932 396 aaKnown RBP7.48□□□□□ -1.21
XPA-203ENST00000485042 KCNH2Q12809 1159 aa7.48□□□□□ -1.21
XPA-203ENST00000485042 NBPF14Q5TI25 921 aa7.48□□□□□ -1.21
XPA-203ENST00000485042 PDXDC2PQ6P474 469 aa7.48□□□□□ -1.21
XPA-203ENST00000485042 DEPDC4Q8N2C3 294 aa7.48□□□□□ -1.21
XPA-203ENST00000485042 PDZRN3Q9UPQ7 1066 aa7.48□□□□□ -1.21
XPA-203ENST00000485042 MTMR7Q9Y216 660 aa7.48□□□□□ -1.21
XPA-203ENST00000485042 GPSM3Q9Y4H4 160 aa7.48□□□□□ -1.21
XPA-203ENST00000485042 PCDHB9Q9Y5E1 797 aa7.48□□□□□ -1.21
XPA-203ENST00000485042 IVNS1ABPQ9Y6Y0 642 aa7.48□□□□□ -1.21
XPA-203ENST00000485042 B4GALNT3Q6L9W6 998 aa7.47□□□□□ -1.21
XPA-203ENST00000485042 FAM160A2Q8N612 972 aaPredicted RBP7.47□□□□□ -1.21
XPA-203ENST00000485042 RGS22Q8NE09 1264 aa7.47□□□□□ -1.21
XPA-203ENST00000485042 GPKOWQ92917 476 aaPredicted RBP eCLIP7.47□□□□□ -1.21
XPA-203ENST00000485042 IL21Q9HBE4 155 aa7.47□□□□□ -1.21
XPA-203ENST00000485042 CEP126Q9P2H0 1117 aa7.47□□□□□ -1.21
XPA-203ENST00000485042 MMP16P51512 607 aa7.46□□□□□ -1.22
XPA-203ENST00000485042 MCCD1P59942 119 aaPredicted RBP7.46□□□□□ -1.22
XPA-203ENST00000485042 ELOAQ14241 798 aaKnown RBP7.46□□□□□ -1.22
XPA-203ENST00000485042 RNF135Q8IUD6 432 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms