RNA–Protein interactions for RNA: ENST00000484380.2

ABCD4-212, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-212ENST00000484380 EDC4Q6P2E9 1401 aaKnown RBP18.51■□□□□ 0.55
ABCD4-212ENST00000484380 WAPLQ7Z5K2 1190 aa18.51■□□□□ 0.55
ABCD4-212ENST00000484380 ITSN1Q15811 1721 aa18.5■□□□□ 0.55
ABCD4-212ENST00000484380 U2AF1L5P0DN76 240 aaPredicted RBP18.49■□□□□ 0.55
ABCD4-212ENST00000484380 U2AF1Q01081 240 aaKnown RBP eCLIP18.49■□□□□ 0.55
ABCD4-212ENST00000484380 ADAMTS13Q76LX8 1427 aa18.49■□□□□ 0.55
ABCD4-212ENST00000484380 WASLO00401 505 aaPredicted RBP18.49■□□□□ 0.55
ABCD4-212ENST00000484380 C3P01024 1663 aa18.49■□□□□ 0.55
ABCD4-212ENST00000484380 PLEKHG1Q9ULL1 1385 aa18.48■□□□□ 0.55
ABCD4-212ENST00000484380 PDE3AQ14432 1141 aa18.48■□□□□ 0.55
ABCD4-212ENST00000484380 CENPQQ7L2Z9 268 aaPredicted RBP18.48■□□□□ 0.55
ABCD4-212ENST00000484380 PLEKHF1Q96S99 279 aa18.48■□□□□ 0.55
ABCD4-212ENST00000484380 PPIP5K1Q6PFW1 1433 aa18.48■□□□□ 0.55
ABCD4-212ENST00000484380 TOPAZ1Q8N9V7 1692 aa18.47■□□□□ 0.55
ABCD4-212ENST00000484380 RRP7AQ9Y3A4 280 aaKnown RBP18.46■□□□□ 0.55
ABCD4-212ENST00000484380 BCAR3O75815 825 aa18.46■□□□□ 0.55
ABCD4-212ENST00000484380 SLIT1O75093 1534 aa18.46■□□□□ 0.55
ABCD4-212ENST00000484380 FER1L4A9Z1Z3 1794 aa18.45■□□□□ 0.54
ABCD4-212ENST00000484380 MAP2P11137 1827 aaKnown RBP18.45■□□□□ 0.54
ABCD4-212ENST00000484380 MYH16Q9H6N6 1097 aa18.44■□□□□ 0.54
ABCD4-212ENST00000484380 ARHGAP23Q9P227 1491 aa18.44■□□□□ 0.54
ABCD4-212ENST00000484380 NRKQ7Z2Y5 1582 aa18.44■□□□□ 0.54
ABCD4-212ENST00000484380 LRRC7Q96NW7 1537 aa18.44■□□□□ 0.54
ABCD4-212ENST00000484380 CDK12Q9NYV4 1490 aaPredicted RBP18.44■□□□□ 0.54
ABCD4-212ENST00000484380 AATKQ6ZMQ8 1374 aa18.43■□□□□ 0.54
ABCD4-212ENST00000484380 NEUROD2Q15784 382 aa18.43■□□□□ 0.54
ABCD4-212ENST00000484380 PNNQ9H307 717 aaKnown RBP18.43■□□□□ 0.54
ABCD4-212ENST00000484380 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.42■□□□□ 0.54
ABCD4-212ENST00000484380 DIAPH1O60610 1272 aaKnown RBP18.42■□□□□ 0.54
ABCD4-212ENST00000484380 CT47B1P0C2W7 299 aaPredicted RBP18.42■□□□□ 0.54
ABCD4-212ENST00000484380 IL16Q14005 1332 aa18.42■□□□□ 0.54
ABCD4-212ENST00000484380 RARSP54136 660 aaKnown RBP18.42■□□□□ 0.54
ABCD4-212ENST00000484380 TXNDC2Q86VQ3 553 aa18.42■□□□□ 0.54
ABCD4-212ENST00000484380 DIP2AQ14689 1571 aa18.41■□□□□ 0.54
ABCD4-212ENST00000484380 MAPK8IP3Q9UPT6 1336 aa18.41■□□□□ 0.54
ABCD4-212ENST00000484380 ROBO2Q9HCK4 1378 aa18.4■□□□□ 0.54
ABCD4-212ENST00000484380 U2SURPO15042 1029 aaKnown RBP18.4■□□□□ 0.54
ABCD4-212ENST00000484380 TMPOP42166 694 aaKnown RBP18.4■□□□□ 0.54
ABCD4-212ENST00000484380 AAMPQ13685 434 aa18.4■□□□□ 0.54
ABCD4-212ENST00000484380 NUDT16Q96DE0 195 aaKnown RBP18.4■□□□□ 0.54
ABCD4-212ENST00000484380 CEBPAP49715 358 aaPredicted RBP18.39■□□□□ 0.54
ABCD4-212ENST00000484380 BACH2Q9BYV9 841 aa18.39■□□□□ 0.54
ABCD4-212ENST00000484380 CCDC61Q9Y6R9 512 aa18.39■□□□□ 0.54
ABCD4-212ENST00000484380 PDE4AP27815 886 aa18.39■□□□□ 0.53
ABCD4-212ENST00000484380 POLKQ9UBT6 870 aa18.39■□□□□ 0.53
ABCD4-212ENST00000484380 ANP32AP39687 249 aaKnown RBP18.38■□□□□ 0.53
ABCD4-212ENST00000484380 FCHSD2O94868 740 aa18.37■□□□□ 0.53
ABCD4-212ENST00000484380 TRIM35Q9UPQ4 493 aa18.37■□□□□ 0.53
ABCD4-212ENST00000484380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.37■□□□□ 0.53
ABCD4-212ENST00000484380 PTCH1Q13635 1447 aa18.37■□□□□ 0.53
ABCD4-212ENST00000484380 NALCNQ8IZF0 1738 aa18.36■□□□□ 0.53
ABCD4-212ENST00000484380 RIMS1Q86UR5 1692 aaKnown RBP18.36■□□□□ 0.53
ABCD4-212ENST00000484380 ZNF692Q9BU19 519 aaPredicted RBP18.35■□□□□ 0.53
ABCD4-212ENST00000484380 PRR36Q9H6K5 1346 aa18.35■□□□□ 0.53
ABCD4-212ENST00000484380 PTPRUQ92729 1446 aa18.35■□□□□ 0.53
ABCD4-212ENST00000484380 CANXP27824 592 aaKnown RBP18.35■□□□□ 0.53
ABCD4-212ENST00000484380 LTKP29376 864 aa18.35■□□□□ 0.53
ABCD4-212ENST00000484380 RSPH6AQ9H0K4 717 aa18.34■□□□□ 0.53
ABCD4-212ENST00000484380 ERICH6Q7L0X2 663 aa18.33■□□□□ 0.53
ABCD4-212ENST00000484380 CLUAP1Q96AJ1 413 aa18.33■□□□□ 0.53
ABCD4-212ENST00000484380 XRN1Q8IZH2 1706 aaKnown RBP18.33■□□□□ 0.53
ABCD4-212ENST00000484380 NME9Q86XW9 330 aa18.33■□□□□ 0.52
ABCD4-212ENST00000484380 IPO9Q96P70 1041 aaKnown RBP18.33■□□□□ 0.52
ABCD4-212ENST00000484380 VIRMAQ69YN4 1812 aaKnown RBP18.32■□□□□ 0.52
ABCD4-212ENST00000484380 PANK1Q8TE04 598 aa18.31■□□□□ 0.52
ABCD4-212ENST00000484380 NOP58Q9Y2X3 529 aaKnown RBP18.31■□□□□ 0.52
ABCD4-212ENST00000484380 EID1Q9Y6B2 187 aa18.31■□□□□ 0.52
ABCD4-212ENST00000484380 OVOS2A0A0J9YW53 1432 aa18.31■□□□□ 0.52
ABCD4-212ENST00000484380 OVOS2Q6IE36 1432 aa18.31■□□□□ 0.52
ABCD4-212ENST00000484380 RIPK4P57078 832 aa18.3■□□□□ 0.52
ABCD4-212ENST00000484380 COG3Q96JB2 828 aa18.3■□□□□ 0.52
ABCD4-212ENST00000484380 PLEKHG3A1L390 1219 aa18.3■□□□□ 0.52
ABCD4-212ENST00000484380 IL13P35225 146 aa18.3■□□□□ 0.52
ABCD4-212ENST00000484380 COG6Q9Y2V7 657 aa18.3■□□□□ 0.52
ABCD4-212ENST00000484380 TBX22Q9Y458 520 aa18.29■□□□□ 0.52
ABCD4-212ENST00000484380 USP6P35125 1406 aa18.28■□□□□ 0.52
ABCD4-212ENST00000484380 FRAT1Q92837 279 aaPredicted RBP18.28■□□□□ 0.52
ABCD4-212ENST00000484380 EMILIN1Q9Y6C2 1016 aa18.28■□□□□ 0.52
ABCD4-212ENST00000484380 NCKAP5LQ9HCH0 1330 aa18.28■□□□□ 0.52
ABCD4-212ENST00000484380 PRKAR2BP31323 418 aa18.28■□□□□ 0.52
ABCD4-212ENST00000484380 TSR2Q969E8 191 aaKnown RBP18.28■□□□□ 0.52
ABCD4-212ENST00000484380 SSH2Q76I76 1423 aa18.27■□□□□ 0.52
ABCD4-212ENST00000484380 NEFMP07197 916 aa18.27■□□□□ 0.52
ABCD4-212ENST00000484380 EXOSC9Q06265 439 aaKnown RBP18.27■□□□□ 0.52
ABCD4-212ENST00000484380 SKAP1Q86WV1 359 aa18.27■□□□□ 0.52
ABCD4-212ENST00000484380 DLG5Q8TDM6 1919 aa18.27■□□□□ 0.52
ABCD4-212ENST00000484380 RLBP1P12271 317 aa18.26■□□□□ 0.51
ABCD4-212ENST00000484380 NFE2L2Q16236 605 aa18.26■□□□□ 0.51
ABCD4-212ENST00000484380 ZKSCAN2Q63HK3 967 aa18.26■□□□□ 0.51
ABCD4-212ENST00000484380 TTC21BQ7Z4L5 1316 aa18.26■□□□□ 0.51
ABCD4-212ENST00000484380 CEP170BQ9Y4F5 1589 aaPredicted RBP18.26■□□□□ 0.51
ABCD4-212ENST00000484380 ADAMTSL3P82987 1691 aa18.25■□□□□ 0.51
ABCD4-212ENST00000484380 RGPD1P0DJD0 1748 aa18.25■□□□□ 0.51
ABCD4-212ENST00000484380 IGHDP01880 384 aa18.25■□□□□ 0.51
ABCD4-212ENST00000484380 FBLN1P23142 703 aa18.25■□□□□ 0.51
ABCD4-212ENST00000484380 THEMISQ8N1K5 641 aaPredicted RBP18.25■□□□□ 0.51
ABCD4-212ENST00000484380 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
ABCD4-212ENST00000484380 ZRANB1Q9UGI0 708 aa18.25■□□□□ 0.51
ABCD4-212ENST00000484380 USP31Q70CQ4 1352 aa18.24■□□□□ 0.51
ABCD4-212ENST00000484380 PPM1GO15355 546 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms