RNA–Protein interactions for RNA: ENST00000483713.5

POLR2F-209, Transcript of RNA polymerase II subunit F, humanhuman

TSL 3

Gene POLR2F, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-209ENST00000483713 AHDC1Q5TGY3 1603 aaPredicted RBP21.71■■□□□ 1.07
POLR2F-209ENST00000483713 DIEXFQ68CQ4 756 aaKnown RBP21.71■■□□□ 1.07
POLR2F-209ENST00000483713 PXDNQ92626 1479 aa21.71■■□□□ 1.07
POLR2F-209ENST00000483713 TTC21BQ7Z4L5 1316 aa21.69■■□□□ 1.06
POLR2F-209ENST00000483713 ANKRD26Q9UPS8 1709 aa21.69■■□□□ 1.06
POLR2F-209ENST00000483713 AMER1Q5JTC6 1135 aaPredicted RBP21.68■■□□□ 1.06
POLR2F-209ENST00000483713 KRT28Q7Z3Y7 464 aa21.68■■□□□ 1.06
POLR2F-209ENST00000483713 SBNO1A3KN83 1393 aa21.68■■□□□ 1.06
POLR2F-209ENST00000483713 SOS2Q07890 1332 aaPredicted RBP21.66■■□□□ 1.06
POLR2F-209ENST00000483713 USP54Q70EL1 1684 aa21.66■■□□□ 1.06
POLR2F-209ENST00000483713 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.65■■□□□ 1.06
POLR2F-209ENST00000483713 FBXO41Q8TF61 875 aa21.65■■□□□ 1.06
POLR2F-209ENST00000483713 PIK3C2AO00443 1686 aa21.65■■□□□ 1.06
POLR2F-209ENST00000483713 ALS2Q96Q42 1657 aa21.64■■□□□ 1.05
POLR2F-209ENST00000483713 PIP4K2BP78356 416 aa21.64■■□□□ 1.05
POLR2F-209ENST00000483713 TNS3Q68CZ2 1445 aa21.63■■□□□ 1.05
POLR2F-209ENST00000483713 FYB1O15117 783 aa21.63■■□□□ 1.05
POLR2F-209ENST00000483713 USP31Q70CQ4 1352 aa21.62■■□□□ 1.05
POLR2F-209ENST00000483713 PAK3O75914 559 aaPredicted RBP21.62■■□□□ 1.05
POLR2F-209ENST00000483713 XPCQ01831 940 aaPredicted RBP21.62■■□□□ 1.05
POLR2F-209ENST00000483713 DDX17Q92841 729 aaKnown RBP21.62■■□□□ 1.05
POLR2F-209ENST00000483713 PHLPP1O60346 1717 aa21.62■■□□□ 1.05
POLR2F-209ENST00000483713 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
POLR2F-209ENST00000483713 ANP32CO43423 234 aa21.61■■□□□ 1.05
POLR2F-209ENST00000483713 ARHGEF10O15013 1369 aa21.61■■□□□ 1.05
POLR2F-209ENST00000483713 CC2D1BQ5T0F9 858 aaKnown RBP21.6■■□□□ 1.05
POLR2F-209ENST00000483713 NME9Q86XW9 330 aa21.6■■□□□ 1.05
POLR2F-209ENST00000483713 OVOS2A0A0J9YW53 1432 aa21.6■■□□□ 1.05
POLR2F-209ENST00000483713 OVOS2Q6IE36 1432 aa21.6■■□□□ 1.05
POLR2F-209ENST00000483713 PARD3Q8TEW0 1356 aa21.6■■□□□ 1.05
POLR2F-209ENST00000483713 SPATA31A3Q5VYP0 1347 aa21.59■■□□□ 1.05
POLR2F-209ENST00000483713 COL16A1Q07092 1604 aaPredicted RBP21.59■■□□□ 1.05
POLR2F-209ENST00000483713 RALBP1Q15311 655 aa21.59■■□□□ 1.05
POLR2F-209ENST00000483713 ABTB2Q8N961 1025 aa21.59■■□□□ 1.05
POLR2F-209ENST00000483713 COG3Q96JB2 828 aa21.58■■□□□ 1.05
POLR2F-209ENST00000483713 GGNBP2Q9H3C7 697 aa21.58■■□□□ 1.05
POLR2F-209ENST00000483713 MARF1Q9Y4F3 1742 aaKnown RBP21.58■■□□□ 1.04
POLR2F-209ENST00000483713 MED1Q15648 1581 aaPredicted RBP21.57■■□□□ 1.04
POLR2F-209ENST00000483713 PRKRIP1Q9H875 184 aaPredicted RBP21.56■■□□□ 1.04
POLR2F-209ENST00000483713 NLRP6P59044 892 aa21.55■■□□□ 1.04
POLR2F-209ENST00000483713 MORC1Q86VD1 984 aa21.55■■□□□ 1.04
POLR2F-209ENST00000483713 NLRP13Q86W25 1043 aa21.55■■□□□ 1.04
POLR2F-209ENST00000483713 LRRC59Q96AG4 307 aaKnown RBP21.55■■□□□ 1.04
POLR2F-209ENST00000483713 LMOD2Q6P5Q4 547 aa21.53■■□□□ 1.04
POLR2F-209ENST00000483713 SLIT3O75094 1523 aa21.53■■□□□ 1.04
POLR2F-209ENST00000483713 USP19O94966 1318 aa21.53■■□□□ 1.04
POLR2F-209ENST00000483713 COL22A1Q8NFW1 1626 aaPredicted RBP21.52■■□□□ 1.04
POLR2F-209ENST00000483713 CRYBG1Q9Y4K1 1723 aa21.52■■□□□ 1.03
POLR2F-209ENST00000483713 CNGB1Q14028 1251 aaPredicted RBP21.51■■□□□ 1.03
POLR2F-209ENST00000483713 ZRANB1Q9UGI0 708 aa21.51■■□□□ 1.03
POLR2F-209ENST00000483713 AATKQ6ZMQ8 1374 aa21.5■■□□□ 1.03
POLR2F-209ENST00000483713 PHRF1Q9P1Y6 1649 aaKnown RBP21.5■■□□□ 1.03
POLR2F-209ENST00000483713 MYBBP1AQ9BQG0 1328 aaKnown RBP21.5■■□□□ 1.03
POLR2F-209ENST00000483713 NUTM2GQ5VZR2 741 aa21.49■■□□□ 1.03
POLR2F-209ENST00000483713 KCNH5Q8NCM2 988 aa21.49■■□□□ 1.03
POLR2F-209ENST00000483713 SHPRHQ149N8 1683 aa21.48■■□□□ 1.03
POLR2F-209ENST00000483713 ABCA3Q99758 1704 aa21.48■■□□□ 1.03
POLR2F-209ENST00000483713 PNPLA6Q8IY17 1366 aa21.48■■□□□ 1.03
POLR2F-209ENST00000483713 NFAT5O94916 1531 aa21.47■■□□□ 1.03
POLR2F-209ENST00000483713 PPP2R1AP30153 589 aa21.45■■□□□ 1.02
POLR2F-209ENST00000483713 ILDR1Q86SU0 546 aaPredicted RBP21.45■■□□□ 1.02
POLR2F-209ENST00000483713 SMG6Q86US8 1419 aaKnown RBP21.45■■□□□ 1.02
POLR2F-209ENST00000483713 MAP2P11137 1827 aaKnown RBP21.44■■□□□ 1.02
POLR2F-209ENST00000483713 TNNT2P45379 298 aaPredicted RBP21.44■■□□□ 1.02
POLR2F-209ENST00000483713 JCADQ9P266 1359 aa21.44■■□□□ 1.02
POLR2F-209ENST00000483713 GCP02774 474 aa21.43■■□□□ 1.02
POLR2F-209ENST00000483713 KIF24Q5T7B8 1368 aa21.42■■□□□ 1.02
POLR2F-209ENST00000483713 MIER1Q8N108 512 aa21.42■■□□□ 1.02
POLR2F-209ENST00000483713 LTN1O94822 1766 aa21.41■■□□□ 1.02
POLR2F-209ENST00000483713 HSPA1LP34931 641 aa21.41■■□□□ 1.02
POLR2F-209ENST00000483713 CDK12Q9NYV4 1490 aaPredicted RBP21.4■■□□□ 1.02
POLR2F-209ENST00000483713 CCER2I3L3R5 266 aa21.4■■□□□ 1.02
POLR2F-209ENST00000483713 ABCC6O95255 1503 aa21.39■■□□□ 1.02
POLR2F-209ENST00000483713 RTL1A6NKG5 1358 aa21.39■■□□□ 1.02
POLR2F-209ENST00000483713 CPDO75976 1380 aa21.39■■□□□ 1.02
POLR2F-209ENST00000483713 SOX12O15370 315 aa21.39■■□□□ 1.01
POLR2F-209ENST00000483713 HAP1P54257 671 aaPredicted RBP21.39■■□□□ 1.01
POLR2F-209ENST00000483713 POLKQ9UBT6 870 aa21.39■■□□□ 1.01
POLR2F-209ENST00000483713 MAP3K19Q56UN5 1328 aa21.37■■□□□ 1.01
POLR2F-209ENST00000483713 MTHFSP49914 203 aa21.37■■□□□ 1.01
POLR2F-209ENST00000483713 RRS1Q15050 365 aaKnown RBP21.37■■□□□ 1.01
POLR2F-209ENST00000483713 CABLES1Q8TDN4 633 aa21.37■■□□□ 1.01
POLR2F-209ENST00000483713 ARHGEF25Q86VW2 580 aa21.36■■□□□ 1.01
POLR2F-209ENST00000483713 CFAP53Q96M91 514 aa21.36■■□□□ 1.01
POLR2F-209ENST00000483713 INSRP06213 1382 aa21.36■■□□□ 1.01
POLR2F-209ENST00000483713 FLT4P35916 1363 aa21.36■■□□□ 1.01
POLR2F-209ENST00000483713 PEAK1Q9H792 1746 aa21.35■■□□□ 1.01
POLR2F-209ENST00000483713 SPATA31A6Q5VVP1 1343 aa21.35■■□□□ 1.01
POLR2F-209ENST00000483713 PLEKHG5O94827 1062 aa21.35■■□□□ 1.01
POLR2F-209ENST00000483713 EMILIN1Q9Y6C2 1016 aa21.35■■□□□ 1.01
POLR2F-209ENST00000483713 FBLN1P23142 703 aa21.34■■□□□ 1.01
POLR2F-209ENST00000483713 AMPHP49418 695 aa21.33■■□□□ 1.01
POLR2F-209ENST00000483713 KIAA0232Q92628 1395 aa21.33■■□□□ 1
POLR2F-209ENST00000483713 PPM1GO15355 546 aaPredicted RBP21.32■■□□□ 1
POLR2F-209ENST00000483713 COL3A1P02461 1466 aaPredicted RBP21.32■■□□□ 1
POLR2F-209ENST00000483713 BLMP54132 1417 aaPredicted RBP21.31■■□□□ 1
POLR2F-209ENST00000483713 COL18A1P39060 1754 aa21.31■■□□□ 1
POLR2F-209ENST00000483713 ZC3H6P61129 1189 aaKnown RBP21.31■■□□□ 1
POLR2F-209ENST00000483713 MRS2Q9HD23 443 aa21.31■■□□□ 1
POLR2F-209ENST00000483713 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms