RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 TOPAZ1Q8N9V7 1692 aa20.42■□□□□ 0.86
VARS-226ENST00000483275 WASLO00401 505 aaPredicted RBP20.42■□□□□ 0.86
VARS-226ENST00000483275 BTG4Q9NY30 223 aa20.42■□□□□ 0.86
VARS-226ENST00000483275 FAM98CQ17RN3 349 aaKnown RBP20.41■□□□□ 0.86
VARS-226ENST00000483275 EIF3AQ14152 1382 aaKnown RBP20.41■□□□□ 0.86
VARS-226ENST00000483275 PAK3O75914 559 aaPredicted RBP20.4■□□□□ 0.86
VARS-226ENST00000483275 KRT27Q7Z3Y8 459 aa20.4■□□□□ 0.86
VARS-226ENST00000483275 NGDNQ8NEJ9 315 aaKnown RBP20.39■□□□□ 0.85
VARS-226ENST00000483275 FAM182BQ5T319 152 aa20.38■□□□□ 0.85
VARS-226ENST00000483275 THSD7AQ9UPZ6 1657 aa20.38■□□□□ 0.85
VARS-226ENST00000483275 RGPD1P0DJD0 1748 aa20.36■□□□□ 0.85
VARS-226ENST00000483275 ONECUT3O60422 494 aaPredicted RBP20.36■□□□□ 0.85
VARS-226ENST00000483275 SF3B2Q13435 895 aaKnown RBP20.36■□□□□ 0.85
VARS-226ENST00000483275 TNS1Q9HBL0 1735 aaKnown RBP20.36■□□□□ 0.85
VARS-226ENST00000483275 NUTM2GQ5VZR2 741 aa20.35■□□□□ 0.85
VARS-226ENST00000483275 KIAA1210Q9ULL0 1709 aa20.34■□□□□ 0.85
VARS-226ENST00000483275 CHRNA2Q15822 529 aa20.34■□□□□ 0.85
VARS-226ENST00000483275 NUDT16Q96DE0 195 aaKnown RBP20.34■□□□□ 0.85
VARS-226ENST00000483275 PRDM11Q9NQV5 511 aa20.34■□□□□ 0.85
VARS-226ENST00000483275 KIAA0232Q92628 1395 aa20.34■□□□□ 0.85
VARS-226ENST00000483275 SPATA31A5Q5VU36 1347 aa20.32■□□□□ 0.84
VARS-226ENST00000483275 SPATA31A7Q8IWB4 1347 aa20.32■□□□□ 0.84
VARS-226ENST00000483275 NRKQ7Z2Y5 1582 aa20.32■□□□□ 0.84
VARS-226ENST00000483275 PSDA5PKW4 1024 aaPredicted RBP20.31■□□□□ 0.84
VARS-226ENST00000483275 CDK19Q9BWU1 502 aa20.31■□□□□ 0.84
VARS-226ENST00000483275 LRP5O75197 1615 aa20.3■□□□□ 0.84
VARS-226ENST00000483275 QRICH2Q9H0J4 1663 aa20.29■□□□□ 0.84
VARS-226ENST00000483275 ZC3H6P61129 1189 aaKnown RBP20.29■□□□□ 0.84
VARS-226ENST00000483275 STRN4Q9NRL3 753 aa20.29■□□□□ 0.84
VARS-226ENST00000483275 NBPF1Q3BBV0 1214 aa20.28■□□□□ 0.84
VARS-226ENST00000483275 ACEP12821 1306 aa20.27■□□□□ 0.83
VARS-226ENST00000483275 POLR3AO14802 1390 aaPredicted RBP20.26■□□□□ 0.83
VARS-226ENST00000483275 BAG6P46379 1132 aa20.26■□□□□ 0.83
VARS-226ENST00000483275 EN1Q05925 392 aaPredicted RBP20.25■□□□□ 0.83
VARS-226ENST00000483275 STAC3Q96MF2 364 aa20.25■□□□□ 0.83
VARS-226ENST00000483275 USP35Q9P2H5 1018 aa20.25■□□□□ 0.83
VARS-226ENST00000483275 LMO7Q8WWI1 1683 aa20.25■□□□□ 0.83
VARS-226ENST00000483275 SPATA31A1Q5TZJ5 1347 aa20.25■□□□□ 0.83
VARS-226ENST00000483275 CAMTA1Q9Y6Y1 1673 aa20.23■□□□□ 0.83
VARS-226ENST00000483275 HRCP23327 699 aa20.23■□□□□ 0.83
VARS-226ENST00000483275 NBPF8Q3BBV2 869 aa20.23■□□□□ 0.83
VARS-226ENST00000483275 PPIP5K1Q6PFW1 1433 aa20.22■□□□□ 0.83
VARS-226ENST00000483275 SSH2Q76I76 1423 aa20.22■□□□□ 0.83
VARS-226ENST00000483275 CCDC61Q9Y6R9 512 aa20.2■□□□□ 0.82
VARS-226ENST00000483275 SRPK2P78362 688 aaKnown RBP20.19■□□□□ 0.82
VARS-226ENST00000483275 ABTB2Q8N961 1025 aa20.19■□□□□ 0.82
VARS-226ENST00000483275 CABP2Q9NPB3 220 aa20.19■□□□□ 0.82
VARS-226ENST00000483275 PLEKHG3A1L390 1219 aa20.18■□□□□ 0.82
VARS-226ENST00000483275 TRIM37O94972 964 aa20.18■□□□□ 0.82
VARS-226ENST00000483275 LARP1Q6PKG0 1096 aaKnown RBP20.18■□□□□ 0.82
VARS-226ENST00000483275 USP19O94966 1318 aa20.18■□□□□ 0.82
VARS-226ENST00000483275 CENPJQ9HC77 1338 aaPredicted RBP20.18■□□□□ 0.82
VARS-226ENST00000483275 NUP188Q5SRE5 1749 aa20.17■□□□□ 0.82
VARS-226ENST00000483275 R3HDM1Q15032 1099 aaKnown RBP20.17■□□□□ 0.82
VARS-226ENST00000483275 EZH2Q15910 746 aaKnown RBP20.17■□□□□ 0.82
VARS-226ENST00000483275 DISP2A7MBM2 1401 aa20.17■□□□□ 0.82
VARS-226ENST00000483275 TRPM1Q7Z4N2 1603 aa20.16■□□□□ 0.82
VARS-226ENST00000483275 PIK3C2AO00443 1686 aa20.16■□□□□ 0.82
VARS-226ENST00000483275 RREB1Q92766 1687 aa20.16■□□□□ 0.82
VARS-226ENST00000483275 ZBTB7CA1YPR0 619 aa20.16■□□□□ 0.82
VARS-226ENST00000483275 EVA1CP58658 441 aa20.16■□□□□ 0.82
VARS-226ENST00000483275 PARP4Q9UKK3 1724 aaKnown RBP20.14■□□□□ 0.81
VARS-226ENST00000483275 COL5A2P05997 1499 aaPredicted RBP20.14■□□□□ 0.81
VARS-226ENST00000483275 CPDO75976 1380 aa20.14■□□□□ 0.81
VARS-226ENST00000483275 WNK3Q9BYP7 1800 aa20.13■□□□□ 0.81
VARS-226ENST00000483275 LRRC37A3O60309 1634 aa20.12■□□□□ 0.81
VARS-226ENST00000483275 USP6P35125 1406 aa20.11■□□□□ 0.81
VARS-226ENST00000483275 RGPD5Q99666 1765 aa20.11■□□□□ 0.81
VARS-226ENST00000483275 FAM196AQ6ZSG2 479 aa20.11■□□□□ 0.81
VARS-226ENST00000483275 SLIT3O75094 1523 aa20.11■□□□□ 0.81
VARS-226ENST00000483275 AKAP12Q02952 1782 aa20.11■□□□□ 0.81
VARS-226ENST00000483275 APBA3O96018 575 aa20.1■□□□□ 0.81
VARS-226ENST00000483275 GCP02774 474 aa20.1■□□□□ 0.81
VARS-226ENST00000483275 L3MBTL2Q969R5 705 aa20.1■□□□□ 0.81
VARS-226ENST00000483275 CAMKK2Q96RR4 588 aa20.1■□□□□ 0.81
VARS-226ENST00000483275 CABP1Q9NZU7 370 aa20.1■□□□□ 0.81
VARS-226ENST00000483275 COL18A1P39060 1754 aa20.1■□□□□ 0.81
VARS-226ENST00000483275 PDE3BQ13370 1112 aa20.09■□□□□ 0.81
VARS-226ENST00000483275 BARGINQ6ZT62 677 aa20.09■□□□□ 0.81
VARS-226ENST00000483275 NLRP13Q86W25 1043 aa20.09■□□□□ 0.81
VARS-226ENST00000483275 TCP11L2Q8N4U5 519 aa20.09■□□□□ 0.81
VARS-226ENST00000483275 PEAK1Q9H792 1746 aa20.08■□□□□ 0.81
VARS-226ENST00000483275 SBF2Q86WG5 1849 aa20.07■□□□□ 0.8
VARS-226ENST00000483275 SIN3AQ96ST3 1273 aa20.07■□□□□ 0.8
VARS-226ENST00000483275 NLRP6P59044 892 aa20.06■□□□□ 0.8
VARS-226ENST00000483275 CRB1P82279 1406 aa20.06■□□□□ 0.8
VARS-226ENST00000483275 SOX12O15370 315 aa20.04■□□□□ 0.8
VARS-226ENST00000483275 NEUROD1Q13562 356 aa20.03■□□□□ 0.8
VARS-226ENST00000483275 ROCK2O75116 1388 aaKnown RBP20.02■□□□□ 0.8
VARS-226ENST00000483275 CPSF1Q10570 1443 aaKnown RBP20.02■□□□□ 0.79
VARS-226ENST00000483275 EVC2Q86UK5 1308 aa20.02■□□□□ 0.79
VARS-226ENST00000483275 AATKQ6ZMQ8 1374 aa20.01■□□□□ 0.79
VARS-226ENST00000483275 PARD3Q8TEW0 1356 aa20.01■□□□□ 0.79
VARS-226ENST00000483275 MON2Q7Z3U7 1717 aa20.01■□□□□ 0.79
VARS-226ENST00000483275 BRD4O60885 1362 aaPredicted RBP20■□□□□ 0.79
VARS-226ENST00000483275 OVOS2A0A0G2JMS6 1433 aa20■□□□□ 0.79
VARS-226ENST00000483275 OVOS2A0A0J9YW53 1432 aa20■□□□□ 0.79
VARS-226ENST00000483275 OVOS2Q6IE36 1432 aa20■□□□□ 0.79
VARS-226ENST00000483275 PTF1AQ7RTS3 328 aa19.99■□□□□ 0.79
VARS-226ENST00000483275 AXIN2Q9Y2T1 843 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms