RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 ATP7BP35670 1465 aa23.98■■□□□ 1.43
RAB11FIP3-209ENST00000483002 ZRANB1Q9UGI0 708 aa23.97■■□□□ 1.43
RAB11FIP3-209ENST00000483002 CCDC61Q9Y6R9 512 aa23.97■■□□□ 1.43
RAB11FIP3-209ENST00000483002 BRWD3Q6RI45 1802 aa23.96■■□□□ 1.43
RAB11FIP3-209ENST00000483002 NUTM2GQ5VZR2 741 aa23.95■■□□□ 1.42
RAB11FIP3-209ENST00000483002 KRT27Q7Z3Y8 459 aa23.95■■□□□ 1.42
RAB11FIP3-209ENST00000483002 PRDM11Q9NQV5 511 aa23.95■■□□□ 1.42
RAB11FIP3-209ENST00000483002 ACEP12821 1306 aa23.94■■□□□ 1.42
RAB11FIP3-209ENST00000483002 KIAA1210Q9ULL0 1709 aa23.94■■□□□ 1.42
RAB11FIP3-209ENST00000483002 FAM98CQ17RN3 349 aaKnown RBP23.94■■□□□ 1.42
RAB11FIP3-209ENST00000483002 NBPF8Q3BBV2 869 aa23.94■■□□□ 1.42
RAB11FIP3-209ENST00000483002 ITSN1Q15811 1721 aa23.93■■□□□ 1.42
RAB11FIP3-209ENST00000483002 BLMP54132 1417 aaPredicted RBP23.93■■□□□ 1.42
RAB11FIP3-209ENST00000483002 SF3B2Q13435 895 aaKnown RBP23.92■■□□□ 1.42
RAB11FIP3-209ENST00000483002 COL14A1Q05707 1796 aaKnown RBP23.91■■□□□ 1.42
RAB11FIP3-209ENST00000483002 PLEKHG3A1L390 1219 aa23.91■■□□□ 1.42
RAB11FIP3-209ENST00000483002 SRPK2P78362 688 aaKnown RBP23.91■■□□□ 1.42
RAB11FIP3-209ENST00000483002 L3MBTL2Q969R5 705 aa23.91■■□□□ 1.42
RAB11FIP3-209ENST00000483002 CENPJQ9HC77 1338 aaPredicted RBP23.9■■□□□ 1.42
RAB11FIP3-209ENST00000483002 CHRNA2Q15822 529 aa23.9■■□□□ 1.42
RAB11FIP3-209ENST00000483002 DEFB132Q7Z7B7 95 aa23.9■■□□□ 1.42
RAB11FIP3-209ENST00000483002 POLR3AO14802 1390 aaPredicted RBP23.9■■□□□ 1.42
RAB11FIP3-209ENST00000483002 ZC3H6P61129 1189 aaKnown RBP23.89■■□□□ 1.41
RAB11FIP3-209ENST00000483002 SIN3AQ96ST3 1273 aa23.89■■□□□ 1.41
RAB11FIP3-209ENST00000483002 SPATA31A5Q5VU36 1347 aa23.88■■□□□ 1.41
RAB11FIP3-209ENST00000483002 SPATA31A7Q8IWB4 1347 aa23.88■■□□□ 1.41
RAB11FIP3-209ENST00000483002 NRAPQ86VF7 1730 aa23.88■■□□□ 1.41
RAB11FIP3-209ENST00000483002 CABP2Q9NPB3 220 aa23.88■■□□□ 1.41
RAB11FIP3-209ENST00000483002 KIAA0232Q92628 1395 aa23.88■■□□□ 1.41
RAB11FIP3-209ENST00000483002 ABTB2Q8N961 1025 aa23.87■■□□□ 1.41
RAB11FIP3-209ENST00000483002 NEUROD1Q13562 356 aa23.86■■□□□ 1.41
RAB11FIP3-209ENST00000483002 STRN4Q9NRL3 753 aa23.86■■□□□ 1.41
RAB11FIP3-209ENST00000483002 CRYBG1Q9Y4K1 1723 aa23.86■■□□□ 1.41
RAB11FIP3-209ENST00000483002 TOPAZ1Q8N9V7 1692 aa23.83■■□□□ 1.41
RAB11FIP3-209ENST00000483002 FAM182BQ5T319 152 aa23.83■■□□□ 1.41
RAB11FIP3-209ENST00000483002 PPIP5K1Q6PFW1 1433 aa23.83■■□□□ 1.4
RAB11FIP3-209ENST00000483002 EVA1CP58658 441 aa23.81■■□□□ 1.4
RAB11FIP3-209ENST00000483002 NLRP13Q86W25 1043 aa23.8■■□□□ 1.4
RAB11FIP3-209ENST00000483002 CABP1Q9NZU7 370 aa23.8■■□□□ 1.4
RAB11FIP3-209ENST00000483002 SPATA31A1Q5TZJ5 1347 aa23.8■■□□□ 1.4
RAB11FIP3-209ENST00000483002 USP35Q9P2H5 1018 aa23.79■■□□□ 1.4
RAB11FIP3-209ENST00000483002 SRCAPQ6ZRS2 3230 aa23.79■■□□□ 1.4
RAB11FIP3-209ENST00000483002 PHRF1Q9P1Y6 1649 aaKnown RBP23.78■■□□□ 1.4
RAB11FIP3-209ENST00000483002 BAG6P46379 1132 aa23.77■■□□□ 1.4
RAB11FIP3-209ENST00000483002 QRICH2Q9H0J4 1663 aa23.76■■□□□ 1.39
RAB11FIP3-209ENST00000483002 GCP02774 474 aa23.76■■□□□ 1.39
RAB11FIP3-209ENST00000483002 USP19O94966 1318 aa23.75■■□□□ 1.39
RAB11FIP3-209ENST00000483002 EVC2Q86UK5 1308 aa23.75■■□□□ 1.39
RAB11FIP3-209ENST00000483002 ROCK2O75116 1388 aaKnown RBP23.74■■□□□ 1.39
RAB11FIP3-209ENST00000483002 NLRP6P59044 892 aa23.73■■□□□ 1.39
RAB11FIP3-209ENST00000483002 LARP1Q6PKG0 1096 aaKnown RBP23.73■■□□□ 1.39
RAB11FIP3-209ENST00000483002 ZBTB7CA1YPR0 619 aa23.72■■□□□ 1.39
RAB11FIP3-209ENST00000483002 EN1Q05925 392 aaPredicted RBP23.72■■□□□ 1.39
RAB11FIP3-209ENST00000483002 CPDO75976 1380 aa23.72■■□□□ 1.39
RAB11FIP3-209ENST00000483002 THSD7AQ9UPZ6 1657 aa23.71■■□□□ 1.39
RAB11FIP3-209ENST00000483002 CAMTA1Q9Y6Y1 1673 aa23.71■■□□□ 1.39
RAB11FIP3-209ENST00000483002 SSH2Q76I76 1423 aa23.71■■□□□ 1.39
RAB11FIP3-209ENST00000483002 BRD4O60885 1362 aaPredicted RBP23.71■■□□□ 1.39
RAB11FIP3-209ENST00000483002 TRPM1Q7Z4N2 1603 aa23.7■■□□□ 1.39
RAB11FIP3-209ENST00000483002 NRKQ7Z2Y5 1582 aa23.7■■□□□ 1.38
RAB11FIP3-209ENST00000483002 USP6P35125 1406 aa23.7■■□□□ 1.38
RAB11FIP3-209ENST00000483002 FAM196AQ6ZSG2 479 aa23.69■■□□□ 1.38
RAB11FIP3-209ENST00000483002 BARGINQ6ZT62 677 aa23.69■■□□□ 1.38
RAB11FIP3-209ENST00000483002 PDE3BQ13370 1112 aa23.68■■□□□ 1.38
RAB11FIP3-209ENST00000483002 TCP11L2Q8N4U5 519 aa23.68■■□□□ 1.38
RAB11FIP3-209ENST00000483002 PSDA5PKW4 1024 aaPredicted RBP23.67■■□□□ 1.38
RAB11FIP3-209ENST00000483002 TRIM37O94972 964 aa23.67■■□□□ 1.38
RAB11FIP3-209ENST00000483002 ZNF692Q9BU19 519 aaPredicted RBP23.65■■□□□ 1.38
RAB11FIP3-209ENST00000483002 RGPD1P0DJD0 1748 aa23.64■■□□□ 1.37
RAB11FIP3-209ENST00000483002 LMO7Q8WWI1 1683 aa23.64■■□□□ 1.37
RAB11FIP3-209ENST00000483002 THRAP3Q9Y2W1 955 aaKnown RBP23.63■■□□□ 1.37
RAB11FIP3-209ENST00000483002 EZH2Q15910 746 aaKnown RBP23.62■■□□□ 1.37
RAB11FIP3-209ENST00000483002 TTC21BQ7Z4L5 1316 aa23.61■■□□□ 1.37
RAB11FIP3-209ENST00000483002 APBA3O96018 575 aa23.61■■□□□ 1.37
RAB11FIP3-209ENST00000483002 COL5A2P05997 1499 aaPredicted RBP23.61■■□□□ 1.37
RAB11FIP3-209ENST00000483002 CARD11Q9BXL7 1154 aa23.6■■□□□ 1.37
RAB11FIP3-209ENST00000483002 AATKQ6ZMQ8 1374 aa23.6■■□□□ 1.37
RAB11FIP3-209ENST00000483002 SOX12O15370 315 aa23.59■■□□□ 1.37
RAB11FIP3-209ENST00000483002 TOM1L2Q6ZVM7 507 aa23.58■■□□□ 1.37
RAB11FIP3-209ENST00000483002 CAMKK2Q96RR4 588 aa23.58■■□□□ 1.37
RAB11FIP3-209ENST00000483002 SLIT3O75094 1523 aa23.58■■□□□ 1.36
RAB11FIP3-209ENST00000483002 DISP2A7MBM2 1401 aa23.58■■□□□ 1.36
RAB11FIP3-209ENST00000483002 CRB1P82279 1406 aa23.58■■□□□ 1.36
RAB11FIP3-209ENST00000483002 R3HDM1Q15032 1099 aaKnown RBP23.57■■□□□ 1.36
RAB11FIP3-209ENST00000483002 AXIN2Q9Y2T1 843 aa23.57■■□□□ 1.36
RAB11FIP3-209ENST00000483002 PIK3C2AO00443 1686 aa23.57■■□□□ 1.36
RAB11FIP3-209ENST00000483002 TNS1Q9HBL0 1735 aaKnown RBP23.56■■□□□ 1.36
RAB11FIP3-209ENST00000483002 KCNH5Q8NCM2 988 aa23.56■■□□□ 1.36
RAB11FIP3-209ENST00000483002 TTC21AQ8NDW8 1320 aa23.56■■□□□ 1.36
RAB11FIP3-209ENST00000483002 KTN1Q86UP2 1357 aaKnown RBP23.55■■□□□ 1.36
RAB11FIP3-209ENST00000483002 ARHGEF25Q86VW2 580 aa23.55■■□□□ 1.36
RAB11FIP3-209ENST00000483002 TONSLQ96HA7 1378 aa23.54■■□□□ 1.36
RAB11FIP3-209ENST00000483002 CPSF1Q10570 1443 aaKnown RBP23.54■■□□□ 1.36
RAB11FIP3-209ENST00000483002 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.53■■□□□ 1.36
RAB11FIP3-209ENST00000483002 TMC1Q8TDI8 760 aa23.53■■□□□ 1.36
RAB11FIP3-209ENST00000483002 AKAP12Q02952 1782 aa23.52■■□□□ 1.36
RAB11FIP3-209ENST00000483002 CSB-PGBD3P0DP91 1061 aa23.51■■□□□ 1.35
RAB11FIP3-209ENST00000483002 DDB1Q16531 1140 aa23.51■■□□□ 1.35
RAB11FIP3-209ENST00000483002 WDR17Q8IZU2 1322 aa23.51■■□□□ 1.35
RAB11FIP3-209ENST00000483002 SBNO2Q9Y2G9 1366 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms