RNA–Protein interactions for RNA: ENST00000482338.5

ERGIC3-214, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-214ENST00000482338 MSH6P52701 1360 aa11.94□□□□□ -0.5
ERGIC3-214ENST00000482338 FYB1O15117 783 aa11.94□□□□□ -0.5
ERGIC3-214ENST00000482338 PPP2R1AP30153 589 aa11.94□□□□□ -0.5
ERGIC3-214ENST00000482338 NLRP13Q86W25 1043 aa11.94□□□□□ -0.5
ERGIC3-214ENST00000482338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.94□□□□□ -0.5
ERGIC3-214ENST00000482338 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
ERGIC3-214ENST00000482338 GGNBP2Q9H3C7 697 aa11.94□□□□□ -0.5
ERGIC3-214ENST00000482338 NHSL1Q5SYE7 1610 aa11.93□□□□□ -0.5
ERGIC3-214ENST00000482338 PHF8Q9UPP1 1060 aa11.93□□□□□ -0.5
ERGIC3-214ENST00000482338 OVOS2A0A0J9YW53 1432 aa11.93□□□□□ -0.5
ERGIC3-214ENST00000482338 OVOS2Q6IE36 1432 aa11.93□□□□□ -0.5
ERGIC3-214ENST00000482338 CRYBG1Q9Y4K1 1723 aa11.92□□□□□ -0.5
ERGIC3-214ENST00000482338 MORC1Q86VD1 984 aa11.92□□□□□ -0.5
ERGIC3-214ENST00000482338 NGDNQ8NEJ9 315 aaKnown RBP11.92□□□□□ -0.5
ERGIC3-214ENST00000482338 YTHDC1Q96MU7 727 aaKnown RBP11.92□□□□□ -0.5
ERGIC3-214ENST00000482338 PEAK1Q9H792 1746 aa11.91□□□□□ -0.5
ERGIC3-214ENST00000482338 TTC21BQ7Z4L5 1316 aa11.91□□□□□ -0.5
ERGIC3-214ENST00000482338 ATF3P18847 181 aa11.91□□□□□ -0.5
ERGIC3-214ENST00000482338 ESCO1Q5FWF5 840 aa11.91□□□□□ -0.5
ERGIC3-214ENST00000482338 NME9Q86XW9 330 aa11.91□□□□□ -0.5
ERGIC3-214ENST00000482338 PHRF1Q9P1Y6 1649 aaKnown RBP11.9□□□□□ -0.5
ERGIC3-214ENST00000482338 TNNT2P45379 298 aaPredicted RBP11.9□□□□□ -0.5
ERGIC3-214ENST00000482338 ORAI2Q96SN7 254 aa11.9□□□□□ -0.5
ERGIC3-214ENST00000482338 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
ERGIC3-214ENST00000482338 TTC21AQ8NDW8 1320 aa11.89□□□□□ -0.51
ERGIC3-214ENST00000482338 CADPS2Q86UW7 1296 aa11.89□□□□□ -0.51
ERGIC3-214ENST00000482338 ROBO1Q9Y6N7 1651 aa11.89□□□□□ -0.51
ERGIC3-214ENST00000482338 COL3A1P02461 1466 aaPredicted RBP11.89□□□□□ -0.51
ERGIC3-214ENST00000482338 ABCA3Q99758 1704 aa11.89□□□□□ -0.51
ERGIC3-214ENST00000482338 AEBP2Q6ZN18 517 aaPredicted RBP11.88□□□□□ -0.51
ERGIC3-214ENST00000482338 FAM9BQ8IZU0 186 aa11.88□□□□□ -0.51
ERGIC3-214ENST00000482338 RGPD5Q99666 1765 aa11.87□□□□□ -0.51
ERGIC3-214ENST00000482338 SMG6Q86US8 1419 aaKnown RBP11.87□□□□□ -0.51
ERGIC3-214ENST00000482338 PNISRQ8TF01 805 aaKnown RBP11.87□□□□□ -0.51
ERGIC3-214ENST00000482338 USP31Q70CQ4 1352 aa11.87□□□□□ -0.51
ERGIC3-214ENST00000482338 PXDNQ92626 1479 aa11.87□□□□□ -0.51
ERGIC3-214ENST00000482338 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-214ENST00000482338 COG3Q96JB2 828 aa11.86□□□□□ -0.51
ERGIC3-214ENST00000482338 CDK12Q9NYV4 1490 aaPredicted RBP11.85□□□□□ -0.51
ERGIC3-214ENST00000482338 AATKQ6ZMQ8 1374 aa11.85□□□□□ -0.51
ERGIC3-214ENST00000482338 FOXO3O43524 673 aa11.85□□□□□ -0.51
ERGIC3-214ENST00000482338 SLIT3O75094 1523 aa11.85□□□□□ -0.51
ERGIC3-214ENST00000482338 NFAT5O94916 1531 aa11.85□□□□□ -0.51
ERGIC3-214ENST00000482338 RGPD2P0DJD1 1756 aa11.84□□□□□ -0.51
ERGIC3-214ENST00000482338 RGPD1P0DJD0 1748 aa11.84□□□□□ -0.51
ERGIC3-214ENST00000482338 MTHFSP49914 203 aa11.84□□□□□ -0.51
ERGIC3-214ENST00000482338 PSME1Q06323 249 aa11.84□□□□□ -0.51
ERGIC3-214ENST00000482338 BLMP54132 1417 aaPredicted RBP11.84□□□□□ -0.51
ERGIC3-214ENST00000482338 MED1Q15648 1581 aaPredicted RBP11.84□□□□□ -0.51
ERGIC3-214ENST00000482338 PAK3O75914 559 aaPredicted RBP11.83□□□□□ -0.52
ERGIC3-214ENST00000482338 FBLN1P23142 703 aa11.83□□□□□ -0.52
ERGIC3-214ENST00000482338 XPCQ01831 940 aaPredicted RBP11.83□□□□□ -0.52
ERGIC3-214ENST00000482338 BRINP3Q76B58 766 aa11.83□□□□□ -0.52
ERGIC3-214ENST00000482338 PHLPP1O60346 1717 aa11.83□□□□□ -0.52
ERGIC3-214ENST00000482338 KRT28Q7Z3Y7 464 aa11.82□□□□□ -0.52
ERGIC3-214ENST00000482338 DDX17Q92841 729 aaKnown RBP11.82□□□□□ -0.52
ERGIC3-214ENST00000482338 AHDC1Q5TGY3 1603 aaPredicted RBP11.82□□□□□ -0.52
ERGIC3-214ENST00000482338 DLG5Q8TDM6 1919 aa11.82□□□□□ -0.52
ERGIC3-214ENST00000482338 TNS3Q68CZ2 1445 aa11.81□□□□□ -0.52
ERGIC3-214ENST00000482338 NUTM2GQ5VZR2 741 aa11.81□□□□□ -0.52
ERGIC3-214ENST00000482338 ABTB2Q8N961 1025 aa11.81□□□□□ -0.52
ERGIC3-214ENST00000482338 SLAIN2Q9P270 581 aa11.81□□□□□ -0.52
ERGIC3-214ENST00000482338 POLKQ9UBT6 870 aa11.81□□□□□ -0.52
ERGIC3-214ENST00000482338 NPHP3Q7Z494 1330 aa11.81□□□□□ -0.52
ERGIC3-214ENST00000482338 INSRP06213 1382 aa11.8□□□□□ -0.52
ERGIC3-214ENST00000482338 PNPLA6Q8IY17 1366 aa11.8□□□□□ -0.52
ERGIC3-214ENST00000482338 NLRP6P59044 892 aa11.8□□□□□ -0.52
ERGIC3-214ENST00000482338 RRS1Q15050 365 aaKnown RBP11.8□□□□□ -0.52
ERGIC3-214ENST00000482338 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
ERGIC3-214ENST00000482338 EMILIN1Q9Y6C2 1016 aa11.8□□□□□ -0.52
ERGIC3-214ENST00000482338 SBNO1A3KN83 1393 aa11.79□□□□□ -0.52
ERGIC3-214ENST00000482338 COL18A1P39060 1754 aa11.79□□□□□ -0.52
ERGIC3-214ENST00000482338 HNRNPUQ00839 825 aaKnown RBP eCLIP11.79□□□□□ -0.52
ERGIC3-214ENST00000482338 WDR43Q15061 677 aaKnown RBP eCLIP11.79□□□□□ -0.52
ERGIC3-214ENST00000482338 SOX12O15370 315 aa11.78□□□□□ -0.52
ERGIC3-214ENST00000482338 ADAMTS8Q9UP79 889 aa11.78□□□□□ -0.52
ERGIC3-214ENST00000482338 VIRMAQ69YN4 1812 aaKnown RBP11.78□□□□□ -0.52
ERGIC3-214ENST00000482338 COL16A1Q07092 1604 aaPredicted RBP11.78□□□□□ -0.52
ERGIC3-214ENST00000482338 COL22A1Q8NFW1 1626 aaPredicted RBP11.78□□□□□ -0.52
ERGIC3-214ENST00000482338 IQSEC2Q5JU85 1478 aa11.77□□□□□ -0.52
ERGIC3-214ENST00000482338 PPM1GO15355 546 aaPredicted RBP11.77□□□□□ -0.53
ERGIC3-214ENST00000482338 USP19O94966 1318 aa11.77□□□□□ -0.53
ERGIC3-214ENST00000482338 FAM208AQ9UK61 1670 aaKnown RBP11.77□□□□□ -0.53
ERGIC3-214ENST00000482338 CAMTA1Q9Y6Y1 1673 aa11.76□□□□□ -0.53
ERGIC3-214ENST00000482338 SOS2Q07890 1332 aaPredicted RBP11.76□□□□□ -0.53
ERGIC3-214ENST00000482338 MAP3K19Q56UN5 1328 aa11.76□□□□□ -0.53
ERGIC3-214ENST00000482338 SPATA31A3Q5VYP0 1347 aa11.76□□□□□ -0.53
ERGIC3-214ENST00000482338 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
ERGIC3-214ENST00000482338 FLT4P35916 1363 aa11.75□□□□□ -0.53
ERGIC3-214ENST00000482338 SENP3-EIF4A1A0A087X0R7 540 aa11.74□□□□□ -0.53
ERGIC3-214ENST00000482338 DIAPH1O60610 1272 aaKnown RBP11.74□□□□□ -0.53
ERGIC3-214ENST00000482338 CENPBP07199 599 aaPredicted RBP11.74□□□□□ -0.53
ERGIC3-214ENST00000482338 ZBED9Q6R2W3 1325 aa11.74□□□□□ -0.53
ERGIC3-214ENST00000482338 RTL1A6NKG5 1358 aa11.74□□□□□ -0.53
ERGIC3-214ENST00000482338 ARHGEF10O15013 1369 aa11.74□□□□□ -0.53
ERGIC3-214ENST00000482338 KIF24Q5T7B8 1368 aa11.74□□□□□ -0.53
ERGIC3-214ENST00000482338 ABCC6O95255 1503 aa11.73□□□□□ -0.53
ERGIC3-214ENST00000482338 CCDC146Q8IYE0 955 aa11.73□□□□□ -0.53
ERGIC3-214ENST00000482338 LMO7Q8WWI1 1683 aa11.73□□□□□ -0.53
ERGIC3-214ENST00000482338 U2SURPO15042 1029 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms