RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 USP17L8P0C7I0 530 aa6.96□□□□□ -1.3
VPS41-212ENST00000482217 PTPRNQ16849 979 aa6.96□□□□□ -1.3
VPS41-212ENST00000482217 PRR7Q8TB68 274 aa6.96□□□□□ -1.3
VPS41-212ENST00000482217 PDZRN3Q9UPQ7 1066 aa6.96□□□□□ -1.3
VPS41-212ENST00000482217 MTMR14Q8NCE2 650 aa6.95□□□□□ -1.3
VPS41-212ENST00000482217 NUDT12Q9BQG2 462 aa6.95□□□□□ -1.3
VPS41-212ENST00000482217 PRM3Q9NNZ6 103 aa6.95□□□□□ -1.3
VPS41-212ENST00000482217 CTDSPL2Q05D32 466 aa6.94□□□□□ -1.3
VPS41-212ENST00000482217 TRIM32Q13049 653 aa6.94□□□□□ -1.3
VPS41-212ENST00000482217 CCNYL3P0C7X3 344 aa6.93□□□□□ -1.3
VPS41-212ENST00000482217 CCDC24Q8N4L8 307 aa6.93□□□□□ -1.3
VPS41-212ENST00000482217 TSC1Q92574 1164 aa6.93□□□□□ -1.3
VPS41-212ENST00000482217 CLUAP1Q96AJ1 413 aa6.93□□□□□ -1.3
VPS41-212ENST00000482217 COG6Q9Y2V7 657 aa6.93□□□□□ -1.3
VPS41-212ENST00000482217 GDF9O60383 454 aa6.92□□□□□ -1.3
VPS41-212ENST00000482217 TRIM67Q6ZTA4 783 aa6.92□□□□□ -1.3
VPS41-212ENST00000482217 WNT7BP56706 349 aa6.91□□□□□ -1.3
VPS41-212ENST00000482217 Q6ZNB5 142 aa6.91□□□□□ -1.3
VPS41-212ENST00000482217 PROSER2Q86WR7 435 aaPredicted RBP6.91□□□□□ -1.3
VPS41-212ENST00000482217 EVA1BQ9NVM1 165 aa6.91□□□□□ -1.3
VPS41-212ENST00000482217 WNT7AO00755 349 aa6.9□□□□□ -1.3
VPS41-212ENST00000482217 TRAK2O60296 914 aa6.9□□□□□ -1.3
VPS41-212ENST00000482217 EIF5BO60841 1220 aaKnown RBP6.9□□□□□ -1.3
VPS41-212ENST00000482217 LYPD8Q6UX82 237 aa6.9□□□□□ -1.3
VPS41-212ENST00000482217 FNBP4Q8N3X1 1017 aaPredicted RBP6.9□□□□□ -1.3
VPS41-212ENST00000482217 POM121Q96HA1 1249 aa6.9□□□□□ -1.3
VPS41-212ENST00000482217 GJD4Q96KN9 370 aaPredicted RBP6.9□□□□□ -1.3
VPS41-212ENST00000482217 NDUFB9Q9Y6M9 179 aa6.9□□□□□ -1.3
VPS41-212ENST00000482217 KCNH2Q12809 1159 aa6.89□□□□□ -1.31
VPS41-212ENST00000482217 WWC1Q8IX03 1113 aa6.89□□□□□ -1.31
VPS41-212ENST00000482217 LRRN4Q8WUT4 740 aa6.89□□□□□ -1.31
VPS41-212ENST00000482217 PKD2L1Q9P0L9 805 aa6.89□□□□□ -1.31
VPS41-212ENST00000482217 TNFRSF10AO00220 468 aa6.88□□□□□ -1.31
VPS41-212ENST00000482217 DGAT1O75907 488 aa6.88□□□□□ -1.31
VPS41-212ENST00000482217 TRIM34Q9BYJ4 488 aa6.88□□□□□ -1.31
VPS41-212ENST00000482217 GDPD2Q9HCC8 539 aa6.88□□□□□ -1.31
VPS41-212ENST00000482217 HMX1Q9NP08 348 aaPredicted RBP6.88□□□□□ -1.31
VPS41-212ENST00000482217 PER1O15534 1290 aaPredicted RBP6.87□□□□□ -1.31
VPS41-212ENST00000482217 FOXC1Q12948 553 aa6.87□□□□□ -1.31
VPS41-212ENST00000482217 PNMA1Q8ND90 353 aa6.87□□□□□ -1.31
VPS41-212ENST00000482217 UNC93B1Q9H1C4 597 aa6.87□□□□□ -1.31
VPS41-212ENST00000482217 TBC1D2BQ9UPU7 963 aa6.87□□□□□ -1.31
VPS41-212ENST00000482217 ABL2P42684 1182 aa6.86□□□□□ -1.31
VPS41-212ENST00000482217 PKDCCQ504Y2 493 aa6.86□□□□□ -1.31
VPS41-212ENST00000482217 PTCRAQ6ISU1 281 aaPredicted RBP6.86□□□□□ -1.31
VPS41-212ENST00000482217 CYP4X1Q8N118 509 aa6.86□□□□□ -1.31
VPS41-212ENST00000482217 TOR4AQ9NXH8 423 aa6.86□□□□□ -1.31
VPS41-212ENST00000482217 F12P00748 615 aaPredicted RBP6.85□□□□□ -1.31
VPS41-212ENST00000482217 CTHP32929 405 aa6.85□□□□□ -1.31
VPS41-212ENST00000482217 NR6A1Q15406 480 aa6.85□□□□□ -1.31
VPS41-212ENST00000482217 TRAF7Q6Q0C0 670 aa6.85□□□□□ -1.31
VPS41-212ENST00000482217 ZNF330Q9Y3S2 320 aaPredicted RBP6.85□□□□□ -1.31
VPS41-212ENST00000482217 LOC105371045A0A1W2PR82 267 aa6.84□□□□□ -1.31
VPS41-212ENST00000482217 FAM187AA6NFU0 413 aa6.84□□□□□ -1.31
VPS41-212ENST00000482217 WASHC4Q2M389 1173 aa6.84□□□□□ -1.31
VPS41-212ENST00000482217 RC3H1Q5TC82 1133 aaKnown RBP6.84□□□□□ -1.31
VPS41-212ENST00000482217 ARMC2Q8NEN0 867 aa6.84□□□□□ -1.31
VPS41-212ENST00000482217 SNIP1Q8TAD8 396 aaKnown RBP6.84□□□□□ -1.31
VPS41-212ENST00000482217 TTC24A2A3L6 582 aaPredicted RBP6.83□□□□□ -1.32
VPS41-212ENST00000482217 SKOR1P84550 965 aa6.83□□□□□ -1.32
VPS41-212ENST00000482217 EPS8L1Q8TE68 723 aa6.83□□□□□ -1.32
VPS41-212ENST00000482217 MRGPRX2Q96LB1 330 aa6.83□□□□□ -1.32
VPS41-212ENST00000482217 ZC3H4Q9UPT8 1303 aaKnown RBP6.82□□□□□ -1.32
VPS41-212ENST00000482217 GPR37L1O60883 481 aa6.82□□□□□ -1.32
VPS41-212ENST00000482217 SH3BP2P78314 561 aa6.82□□□□□ -1.32
VPS41-212ENST00000482217 IRF5Q13568 498 aa6.82□□□□□ -1.32
VPS41-212ENST00000482217 ZNF511Q8NB15 262 aa6.82□□□□□ -1.32
VPS41-212ENST00000482217 EHBP1Q8NDI1 1231 aa6.82□□□□□ -1.32
VPS41-212ENST00000482217 AVPP01185 164 aa6.81□□□□□ -1.32
VPS41-212ENST00000482217 NBPF14Q5TI25 921 aa6.81□□□□□ -1.32
VPS41-212ENST00000482217 MAP10Q9P2G4 905 aa6.81□□□□□ -1.32
VPS41-212ENST00000482217 FKBPLQ9UIM3 349 aa6.81□□□□□ -1.32
VPS41-212ENST00000482217 ARID3CA6NKF2 412 aa6.8□□□□□ -1.32
VPS41-212ENST00000482217 VARSP26640 1264 aaKnown RBP6.8□□□□□ -1.32
VPS41-212ENST00000482217 CTC1Q2NKJ3 1217 aa6.8□□□□□ -1.32
VPS41-212ENST00000482217 CRIPAKQ8N1N5 446 aa6.8□□□□□ -1.32
VPS41-212ENST00000482217 BAP1Q92560 729 aa6.8□□□□□ -1.32
VPS41-212ENST00000482217 GPKOWQ92917 476 aaPredicted RBP eCLIP6.8□□□□□ -1.32
VPS41-212ENST00000482217 C1orf115Q9H7X2 142 aa6.8□□□□□ -1.32
VPS41-212ENST00000482217 ZNF777Q9ULD5 760 aaPredicted RBP6.8□□□□□ -1.32
VPS41-212ENST00000482217 MPNDQ8N594 471 aa6.79□□□□□ -1.32
VPS41-212ENST00000482217 LCE2BO14633 110 aa6.78□□□□□ -1.32
VPS41-212ENST00000482217 SIAH2O43255 324 aa6.78□□□□□ -1.32
VPS41-212ENST00000482217 SOX11P35716 441 aa6.78□□□□□ -1.32
VPS41-212ENST00000482217 LINC01559Q495D7 138 aa6.78□□□□□ -1.32
VPS41-212ENST00000482217 BPHLQ86WA6 291 aaPredicted RBP6.78□□□□□ -1.32
VPS41-212ENST00000482217 SMPD1P17405 629 aa6.77□□□□□ -1.33
VPS41-212ENST00000482217 SMCPP49901 116 aaPredicted RBP6.77□□□□□ -1.33
VPS41-212ENST00000482217 FAM174AQ8TBP5 190 aa6.77□□□□□ -1.33
VPS41-212ENST00000482217 SERPINA10Q9UK55 444 aa6.77□□□□□ -1.33
VPS41-212ENST00000482217 GPSM3Q9Y4H4 160 aa6.77□□□□□ -1.33
VPS41-212ENST00000482217 POM121CA8CG34 1229 aa6.76□□□□□ -1.33
VPS41-212ENST00000482217 NR1H3Q13133 447 aa6.76□□□□□ -1.33
VPS41-212ENST00000482217 PDXDC2PQ6P474 469 aa6.76□□□□□ -1.33
VPS41-212ENST00000482217 ZBBXA8MT70 800 aa6.75□□□□□ -1.33
VPS41-212ENST00000482217 J3QL48 77 aa6.75□□□□□ -1.33
VPS41-212ENST00000482217 AXIN1O15169 862 aa6.75□□□□□ -1.33
VPS41-212ENST00000482217 ALDH1A1P00352 501 aa6.75□□□□□ -1.33
VPS41-212ENST00000482217 VAC14Q08AM6 782 aa6.75□□□□□ -1.33
VPS41-212ENST00000482217 CCDC82Q8N4S0 544 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms