RNA–Protein interactions for RNA: ENST00000482028.5

PABPC4-213, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-213ENST00000482028 PLEKHG3A1L390 1219 aa17■□□□□ 0.31
PABPC4-213ENST00000482028 WAPLQ7Z5K2 1190 aa17■□□□□ 0.31
PABPC4-213ENST00000482028 WDR63Q8IWG1 891 aa17■□□□□ 0.31
PABPC4-213ENST00000482028 PLEKHH1Q9ULM0 1364 aa17■□□□□ 0.31
PABPC4-213ENST00000482028 ANKLE2Q86XL3 938 aa16.99■□□□□ 0.31
PABPC4-213ENST00000482028 ROBO2Q9HCK4 1378 aa16.99■□□□□ 0.31
PABPC4-213ENST00000482028 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
PABPC4-213ENST00000482028 LRRC7Q96NW7 1537 aa16.98■□□□□ 0.31
PABPC4-213ENST00000482028 RRP1P56182 461 aaKnown RBP16.98■□□□□ 0.31
PABPC4-213ENST00000482028 TRMT2AQ8IZ69 625 aaKnown RBP16.98■□□□□ 0.31
PABPC4-213ENST00000482028 DMRT2Q9Y5R5 561 aa16.98■□□□□ 0.31
PABPC4-213ENST00000482028 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.98■□□□□ 0.31
PABPC4-213ENST00000482028 CDK12Q9NYV4 1490 aaPredicted RBP16.98■□□□□ 0.31
PABPC4-213ENST00000482028 TTC21AQ8NDW8 1320 aa16.97■□□□□ 0.31
PABPC4-213ENST00000482028 NEFMP07197 916 aa16.97■□□□□ 0.31
PABPC4-213ENST00000482028 CT47B1P0C2W7 299 aaPredicted RBP16.97■□□□□ 0.31
PABPC4-213ENST00000482028 COL3A1P02461 1466 aaPredicted RBP16.97■□□□□ 0.31
PABPC4-213ENST00000482028 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
PABPC4-213ENST00000482028 CEBPAP49715 358 aaPredicted RBP16.96■□□□□ 0.31
PABPC4-213ENST00000482028 SLFN5Q08AF3 891 aa16.96■□□□□ 0.31
PABPC4-213ENST00000482028 NRKQ7Z2Y5 1582 aa16.96■□□□□ 0.31
PABPC4-213ENST00000482028 CHD2O14647 1828 aaKnown RBP16.96■□□□□ 0.3
PABPC4-213ENST00000482028 COG3Q96JB2 828 aa16.95■□□□□ 0.3
PABPC4-213ENST00000482028 AMOTL2Q9Y2J4 779 aa16.95■□□□□ 0.3
PABPC4-213ENST00000482028 APAF1O14727 1248 aa16.94■□□□□ 0.3
PABPC4-213ENST00000482028 DIAPH1O60610 1272 aaKnown RBP16.94■□□□□ 0.3
PABPC4-213ENST00000482028 AAMPQ13685 434 aa16.94■□□□□ 0.3
PABPC4-213ENST00000482028 DUSP27Q5VZP5 1158 aa16.94■□□□□ 0.3
PABPC4-213ENST00000482028 FCHSD2O94868 740 aa16.93■□□□□ 0.3
PABPC4-213ENST00000482028 GGNBP2Q9H3C7 697 aa16.93■□□□□ 0.3
PABPC4-213ENST00000482028 PTPRUQ92729 1446 aa16.93■□□□□ 0.3
PABPC4-213ENST00000482028 IL16Q14005 1332 aa16.93■□□□□ 0.3
PABPC4-213ENST00000482028 MAP2P11137 1827 aaKnown RBP16.92■□□□□ 0.3
PABPC4-213ENST00000482028 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
PABPC4-213ENST00000482028 NALCNQ8IZF0 1738 aa16.92■□□□□ 0.3
PABPC4-213ENST00000482028 MAPK8IP3Q9UPT6 1336 aa16.92■□□□□ 0.3
PABPC4-213ENST00000482028 USP54Q70EL1 1684 aa16.91■□□□□ 0.3
PABPC4-213ENST00000482028 KIF24Q5T7B8 1368 aa16.91■□□□□ 0.3
PABPC4-213ENST00000482028 FMN2Q9NZ56 1722 aa16.91■□□□□ 0.3
PABPC4-213ENST00000482028 USP6P35125 1406 aa16.91■□□□□ 0.3
PABPC4-213ENST00000482028 CALD1Q05682 793 aaKnown RBP16.91■□□□□ 0.3
PABPC4-213ENST00000482028 U2AF1L5P0DN76 240 aaPredicted RBP16.9■□□□□ 0.3
PABPC4-213ENST00000482028 U2AF1Q01081 240 aaKnown RBP eCLIP16.9■□□□□ 0.3
PABPC4-213ENST00000482028 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
PABPC4-213ENST00000482028 TCP11L2Q8N4U5 519 aa16.89■□□□□ 0.29
PABPC4-213ENST00000482028 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
PABPC4-213ENST00000482028 SLC26A8Q96RN1 970 aa16.88■□□□□ 0.29
PABPC4-213ENST00000482028 USP31Q70CQ4 1352 aa16.88■□□□□ 0.29
PABPC4-213ENST00000482028 NWD1Q149M9 1564 aa16.87■□□□□ 0.29
PABPC4-213ENST00000482028 CDCA7LQ96GN5 454 aa16.87■□□□□ 0.29
PABPC4-213ENST00000482028 CCDC136Q96JN2 1154 aa16.87■□□□□ 0.29
PABPC4-213ENST00000482028 OVOS2A0A0J9YW53 1432 aa16.87■□□□□ 0.29
PABPC4-213ENST00000482028 OVOS2Q6IE36 1432 aa16.87■□□□□ 0.29
PABPC4-213ENST00000482028 MS4A1P11836 297 aa16.86■□□□□ 0.29
PABPC4-213ENST00000482028 LMOD3Q0VAK6 560 aa16.86■□□□□ 0.29
PABPC4-213ENST00000482028 CCDC146Q8IYE0 955 aa16.86■□□□□ 0.29
PABPC4-213ENST00000482028 ZNF428Q96B54 188 aa16.86■□□□□ 0.29
PABPC4-213ENST00000482028 SALL2Q9Y467 1007 aaPredicted RBP16.86■□□□□ 0.29
PABPC4-213ENST00000482028 SSH2Q76I76 1423 aa16.86■□□□□ 0.29
PABPC4-213ENST00000482028 POLKQ9UBT6 870 aa16.85■□□□□ 0.29
PABPC4-213ENST00000482028 ACEP12821 1306 aa16.85■□□□□ 0.29
PABPC4-213ENST00000482028 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
PABPC4-213ENST00000482028 NPHP4O75161 1426 aaPredicted RBP16.85■□□□□ 0.29
PABPC4-213ENST00000482028 PRR36Q9H6K5 1346 aa16.84■□□□□ 0.29
PABPC4-213ENST00000482028 NCOA3Q9Y6Q9 1424 aa16.84■□□□□ 0.29
PABPC4-213ENST00000482028 PDE3AQ14432 1141 aa16.83■□□□□ 0.28
PABPC4-213ENST00000482028 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
PABPC4-213ENST00000482028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.83■□□□□ 0.28
PABPC4-213ENST00000482028 PLEKHF1Q96S99 279 aa16.83■□□□□ 0.28
PABPC4-213ENST00000482028 ADGRL3Q9HAR2 1447 aa16.82■□□□□ 0.28
PABPC4-213ENST00000482028 U2SURPO15042 1029 aaKnown RBP16.82■□□□□ 0.28
PABPC4-213ENST00000482028 TMPOP42166 694 aaKnown RBP16.8■□□□□ 0.28
PABPC4-213ENST00000482028 HAP1P54257 671 aaPredicted RBP16.8■□□□□ 0.28
PABPC4-213ENST00000482028 IRX6P78412 446 aaPredicted RBP16.8■□□□□ 0.28
PABPC4-213ENST00000482028 KCNA6P17658 529 aa16.79■□□□□ 0.28
PABPC4-213ENST00000482028 NME9Q86XW9 330 aa16.78■□□□□ 0.28
PABPC4-213ENST00000482028 NGDNQ8NEJ9 315 aaKnown RBP16.78■□□□□ 0.28
PABPC4-213ENST00000482028 UBAP1LF5GYI3 381 aa16.77■□□□□ 0.28
PABPC4-213ENST00000482028 KIF1AQ12756 1690 aa16.76■□□□□ 0.27
PABPC4-213ENST00000482028 IL13P35225 146 aa16.76■□□□□ 0.27
PABPC4-213ENST00000482028 RSPH6AQ9H0K4 717 aa16.76■□□□□ 0.27
PABPC4-213ENST00000482028 SBNO1A3KN83 1393 aa16.76■□□□□ 0.27
PABPC4-213ENST00000482028 RTL1A6NKG5 1358 aa16.76■□□□□ 0.27
PABPC4-213ENST00000482028 FLT4P35916 1363 aa16.76■□□□□ 0.27
PABPC4-213ENST00000482028 DCCP43146 1447 aa16.75■□□□□ 0.27
PABPC4-213ENST00000482028 RGPD8O14715 1765 aaPredicted RBP16.74■□□□□ 0.27
PABPC4-213ENST00000482028 NFE2L2Q16236 605 aa16.74■□□□□ 0.27
PABPC4-213ENST00000482028 ARHGEF10O15013 1369 aa16.74■□□□□ 0.27
PABPC4-213ENST00000482028 RGPD1P0DJD0 1748 aa16.73■□□□□ 0.27
PABPC4-213ENST00000482028 RIPK4P57078 832 aa16.73■□□□□ 0.27
PABPC4-213ENST00000482028 B4GALNT3Q6L9W6 998 aa16.73■□□□□ 0.27
PABPC4-213ENST00000482028 TSHZ2Q9NRE2 1034 aa16.73■□□□□ 0.27
PABPC4-213ENST00000482028 PHRF1Q9P1Y6 1649 aaKnown RBP16.73■□□□□ 0.27
PABPC4-213ENST00000482028 PIK3C2AO00443 1686 aa16.72■□□□□ 0.27
PABPC4-213ENST00000482028 CHMP4BQ9H444 224 aaKnown RBP16.72■□□□□ 0.27
PABPC4-213ENST00000482028 GNAI1P63096 354 aa16.71■□□□□ 0.27
PABPC4-213ENST00000482028 ALDH1L2Q3SY69 923 aa16.71■□□□□ 0.27
PABPC4-213ENST00000482028 CENPQQ7L2Z9 268 aaPredicted RBP16.71■□□□□ 0.27
PABPC4-213ENST00000482028 PPM1GO15355 546 aaPredicted RBP16.7■□□□□ 0.26
PABPC4-213ENST00000482028 ADRA2BP18089 450 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms