RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 PNMA1Q8ND90 353 aa11.47□□□□□ -0.57
SEC22A-207ENST00000481965 HPS5Q9UPZ3 1129 aa11.47□□□□□ -0.57
SEC22A-207ENST00000481965 ZBBXA8MT70 800 aa11.46□□□□□ -0.57
SEC22A-207ENST00000481965 JUNDP17535 347 aa11.46□□□□□ -0.57
SEC22A-207ENST00000481965 RGS22Q8NE09 1264 aa11.46□□□□□ -0.57
SEC22A-207ENST00000481965 PPP4CP60510 307 aa11.45□□□□□ -0.58
SEC22A-207ENST00000481965 KANK4Q5T7N3 995 aaPredicted RBP11.45□□□□□ -0.58
SEC22A-207ENST00000481965 TMCO4Q5TGY1 634 aa11.45□□□□□ -0.58
SEC22A-207ENST00000481965 ANKK1Q8NFD2 765 aa11.45□□□□□ -0.58
SEC22A-207ENST00000481965 FMNL1O95466 1100 aaPredicted RBP11.44□□□□□ -0.58
SEC22A-207ENST00000481965 KCNA1Q09470 495 aa11.44□□□□□ -0.58
SEC22A-207ENST00000481965 PTPRNQ16849 979 aa11.44□□□□□ -0.58
SEC22A-207ENST00000481965 PCDHB3Q9Y5E6 796 aa11.44□□□□□ -0.58
SEC22A-207ENST00000481965 TSR3Q9UJK0 312 aaKnown RBP11.43□□□□□ -0.58
SEC22A-207ENST00000481965 MFAP1P55081 439 aaKnown RBP11.42□□□□□ -0.58
SEC22A-207ENST00000481965 OCSTAMPQ9BR26 566 aa11.42□□□□□ -0.58
SEC22A-207ENST00000481965 ZC3H4Q9UPT8 1303 aaKnown RBP11.41□□□□□ -0.58
SEC22A-207ENST00000481965 NR1I2O75469 434 aa11.41□□□□□ -0.58
SEC22A-207ENST00000481965 LCE2DQ5TA82 110 aaPredicted RBP11.41□□□□□ -0.58
SEC22A-207ENST00000481965 FAM160A2Q8N612 972 aaPredicted RBP11.41□□□□□ -0.58
SEC22A-207ENST00000481965 FAM174AQ8TBP5 190 aa11.41□□□□□ -0.58
SEC22A-207ENST00000481965 VRTNQ9H8Y1 702 aa11.4□□□□□ -0.58
SEC22A-207ENST00000481965 ZMIZ1Q9ULJ6 1067 aa11.4□□□□□ -0.58
SEC22A-207ENST00000481965 DXOO77932 396 aaKnown RBP11.39□□□□□ -0.59
SEC22A-207ENST00000481965 MSS51Q4VC12 460 aa11.39□□□□□ -0.59
SEC22A-207ENST00000481965 NFATC2IPQ8NCF5 419 aa11.39□□□□□ -0.59
SEC22A-207ENST00000481965 MTMR7Q9Y216 660 aa11.39□□□□□ -0.59
SEC22A-207ENST00000481965 USP17L3A6NCW0 530 aa11.38□□□□□ -0.59
SEC22A-207ENST00000481965 USP17L4A6NCW7 530 aa11.38□□□□□ -0.59
SEC22A-207ENST00000481965 PATL2C9JE40 543 aaKnown RBP11.38□□□□□ -0.59
SEC22A-207ENST00000481965 USP17L2Q6R6M4 530 aa11.38□□□□□ -0.59
SEC22A-207ENST00000481965 USP17L1Q7RTZ2 530 aa11.38□□□□□ -0.59
SEC22A-207ENST00000481965 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
SEC22A-207ENST00000481965 EVA1BQ9NVM1 165 aa11.38□□□□□ -0.59
SEC22A-207ENST00000481965 GOLGA8CPA6NN73 597 aa11.37□□□□□ -0.59
SEC22A-207ENST00000481965 CTHP32929 405 aa11.37□□□□□ -0.59
SEC22A-207ENST00000481965 ELOAQ14241 798 aaKnown RBP11.37□□□□□ -0.59
SEC22A-207ENST00000481965 WNT2BQ93097 391 aa11.37□□□□□ -0.59
SEC22A-207ENST00000481965 PRDM9Q9NQV7 894 aa11.37□□□□□ -0.59
SEC22A-207ENST00000481965 WBP1LQ9NX94 342 aa11.37□□□□□ -0.59
SEC22A-207ENST00000481965 USP17L5A8MUK1 530 aa11.36□□□□□ -0.59
SEC22A-207ENST00000481965 CCNYL3P0C7X3 344 aa11.36□□□□□ -0.59
SEC22A-207ENST00000481965 SKIP12755 728 aa11.36□□□□□ -0.59
SEC22A-207ENST00000481965 MMP16P51512 607 aa11.36□□□□□ -0.59
SEC22A-207ENST00000481965 PLEKHM2Q8IWE5 1019 aa11.36□□□□□ -0.59
SEC22A-207ENST00000481965 STK32AQ8WU08 396 aa11.36□□□□□ -0.59
SEC22A-207ENST00000481965 IVNS1ABPQ9Y6Y0 642 aa11.36□□□□□ -0.59
SEC22A-207ENST00000481965 KCNH2Q12809 1159 aa11.35□□□□□ -0.59
SEC22A-207ENST00000481965 TMEM164Q5U3C3 297 aa11.35□□□□□ -0.59
SEC22A-207ENST00000481965 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
SEC22A-207ENST00000481965 NUDT12Q9BQG2 462 aa11.35□□□□□ -0.59
SEC22A-207ENST00000481965 PDXDC2PQ6P474 469 aa11.34□□□□□ -0.59
SEC22A-207ENST00000481965 DEPDC4Q8N2C3 294 aa11.34□□□□□ -0.59
SEC22A-207ENST00000481965 PHTF2Q8N3S3 785 aa11.34□□□□□ -0.59
SEC22A-207ENST00000481965 SPSB2Q99619 263 aa11.34□□□□□ -0.59
SEC22A-207ENST00000481965 CEP126Q9P2H0 1117 aa11.34□□□□□ -0.59
SEC22A-207ENST00000481965 GPSM3Q9Y4H4 160 aa11.34□□□□□ -0.59
SEC22A-207ENST00000481965 COPS2P61201 443 aa11.31□□□□□ -0.6
SEC22A-207ENST00000481965 PTK2Q05397 1052 aa11.31□□□□□ -0.6
SEC22A-207ENST00000481965 CRTC2Q53ET0 693 aaPredicted RBP11.31□□□□□ -0.6
SEC22A-207ENST00000481965 FOXD4L5Q5VV16 416 aaPredicted RBP11.31□□□□□ -0.6
SEC22A-207ENST00000481965 FOXD4L4Q8WXT5 416 aaPredicted RBP11.31□□□□□ -0.6
SEC22A-207ENST00000481965 STAC3Q96MF2 364 aa11.31□□□□□ -0.6
SEC22A-207ENST00000481965 SLAIN2Q9P270 581 aa11.31□□□□□ -0.6
SEC22A-207ENST00000481965 NOVA2Q9UNW9 492 aaKnown RBP11.31□□□□□ -0.6
SEC22A-207ENST00000481965 TLL1O43897 1013 aa11.3□□□□□ -0.6
SEC22A-207ENST00000481965 PHLDB3Q6NSJ2 640 aa11.3□□□□□ -0.6
SEC22A-207ENST00000481965 GPKOWQ92917 476 aaPredicted RBP eCLIP11.3□□□□□ -0.65e-7■■■■□ 23.9
SEC22A-207ENST00000481965 CHIC2Q9UKJ5 165 aa11.3□□□□□ -0.6
SEC22A-207ENST00000481965 NCOA4Q13772 614 aa11.29□□□□□ -0.6
SEC22A-207ENST00000481965 PTCRAQ6ISU1 281 aaPredicted RBP11.29□□□□□ -0.6
SEC22A-207ENST00000481965 MKRN1Q9UHC7 482 aaKnown RBP11.29□□□□□ -0.6
SEC22A-207ENST00000481965 FAM196BA6NMK8 535 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 USP17L15C9J2P7 530 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 USP17L10C9JJH3 530 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 USP17L13C9JLJ4 530 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 USP17L12C9JPN9 530 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 USP17L11C9JVI0 530 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 USP17L21D6R901 530 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 USP17L18D6R9N7 530 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 USP17L22D6RA61 530 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 USP17L17D6RBQ6 530 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 USP17L19D6RCP7 530 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 USP17L20D6RJB6 530 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 USP17L24Q0WX57 530 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 ARMC2Q8NEN0 867 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 ADAM32Q8TC27 787 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 PCDHB9Q9Y5E1 797 aa11.28□□□□□ -0.6
SEC22A-207ENST00000481965 FAM69CQ0P6D2 419 aa11.27□□□□□ -0.61
SEC22A-207ENST00000481965 PTK7Q13308 1070 aa11.27□□□□□ -0.61
SEC22A-207ENST00000481965 THSD4Q6ZMP0 1018 aa11.27□□□□□ -0.61
SEC22A-207ENST00000481965 SH3BP5LQ7L8J4 393 aa11.27□□□□□ -0.61
SEC22A-207ENST00000481965 PLPP7Q8NBV4 271 aa11.27□□□□□ -0.61
SEC22A-207ENST00000481965 GNEQ9Y223 722 aaKnown RBP11.27□□□□□ -0.61
SEC22A-207ENST00000481965 TSGA10IPQ3SY00 556 aa11.26□□□□□ -0.61
SEC22A-207ENST00000481965 SLFNL1Q499Z3 407 aa11.26□□□□□ -0.61
SEC22A-207ENST00000481965 NBPF14Q5TI25 921 aa11.26□□□□□ -0.61
SEC22A-207ENST00000481965 TRAF7Q6Q0C0 670 aa11.26□□□□□ -0.61
SEC22A-207ENST00000481965 RNF135Q8IUD6 432 aa11.26□□□□□ -0.61
SEC22A-207ENST00000481965 ZNF428Q96B54 188 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms