RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 CARD14Q9BXL6 1004 aa28.53■■■□□ 2.16
VPS16-207ENST00000481812 TTC21AQ8NDW8 1320 aa28.51■■■□□ 2.15
VPS16-207ENST00000481812 COL16A1Q07092 1604 aaPredicted RBP28.51■■■□□ 2.15
VPS16-207ENST00000481812 TTC21BQ7Z4L5 1316 aa28.5■■■□□ 2.15
VPS16-207ENST00000481812 ALS2Q96Q42 1657 aa28.49■■■□□ 2.15
VPS16-207ENST00000481812 PER1O15534 1290 aaPredicted RBP28.49■■■□□ 2.15
VPS16-207ENST00000481812 DDX10Q13206 875 aaKnown RBP28.49■■■□□ 2.15
VPS16-207ENST00000481812 XPCQ01831 940 aaPredicted RBP28.48■■■□□ 2.15
VPS16-207ENST00000481812 LRRC59Q96AG4 307 aaKnown RBP28.48■■■□□ 2.15
VPS16-207ENST00000481812 NSD3Q9BZ95 1437 aa28.48■■■□□ 2.15
VPS16-207ENST00000481812 SPATA31A3Q5VYP0 1347 aa28.47■■■□□ 2.15
VPS16-207ENST00000481812 TNS3Q68CZ2 1445 aa28.46■■■□□ 2.15
VPS16-207ENST00000481812 KNSTRNQ9Y448 316 aa28.45■■■□□ 2.14
VPS16-207ENST00000481812 CGNL1Q0VF96 1302 aa28.43■■■□□ 2.14
VPS16-207ENST00000481812 ARHGEF10O15013 1369 aa28.43■■■□□ 2.14
VPS16-207ENST00000481812 PAK3O75914 559 aaPredicted RBP28.43■■■□□ 2.14
VPS16-207ENST00000481812 KIF20BQ96Q89 1820 aa28.43■■■□□ 2.14
VPS16-207ENST00000481812 USP54Q70EL1 1684 aa28.42■■■□□ 2.14
VPS16-207ENST00000481812 PIK3C2AO00443 1686 aa28.42■■■□□ 2.14
VPS16-207ENST00000481812 NPC1L1Q9UHC9 1359 aa28.41■■■□□ 2.14
VPS16-207ENST00000481812 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.41■■■□□ 2.14
VPS16-207ENST00000481812 USP31Q70CQ4 1352 aa28.4■■■□□ 2.14
VPS16-207ENST00000481812 NSD2O96028 1365 aa28.39■■■□□ 2.14
VPS16-207ENST00000481812 FYB1O15117 783 aa28.39■■■□□ 2.14
VPS16-207ENST00000481812 HSPA1LP34931 641 aa28.39■■■□□ 2.14
VPS16-207ENST00000481812 ABTB2Q8N961 1025 aa28.39■■■□□ 2.14
VPS16-207ENST00000481812 AMER1Q5JTC6 1135 aaPredicted RBP28.38■■■□□ 2.13
VPS16-207ENST00000481812 COL22A1Q8NFW1 1626 aaPredicted RBP28.37■■■□□ 2.13
VPS16-207ENST00000481812 ANKRD26Q9UPS8 1709 aa28.37■■■□□ 2.13
VPS16-207ENST00000481812 SHPRHQ149N8 1683 aa28.36■■■□□ 2.13
VPS16-207ENST00000481812 NLRP13Q86W25 1043 aa28.36■■■□□ 2.13
VPS16-207ENST00000481812 NME9Q86XW9 330 aa28.36■■■□□ 2.13
VPS16-207ENST00000481812 MED1Q15648 1581 aaPredicted RBP28.36■■■□□ 2.13
VPS16-207ENST00000481812 NLRP6P59044 892 aa28.34■■■□□ 2.13
VPS16-207ENST00000481812 MARF1Q9Y4F3 1742 aaKnown RBP28.34■■■□□ 2.13
VPS16-207ENST00000481812 PNPLA6Q8IY17 1366 aa28.34■■■□□ 2.13
VPS16-207ENST00000481812 JCADQ9P266 1359 aa28.34■■■□□ 2.13
VPS16-207ENST00000481812 OVOS2A0A0J9YW53 1432 aa28.34■■■□□ 2.13
VPS16-207ENST00000481812 OVOS2Q6IE36 1432 aa28.34■■■□□ 2.13
VPS16-207ENST00000481812 LMOD2Q6P5Q4 547 aa28.33■■■□□ 2.13
VPS16-207ENST00000481812 USP19O94966 1318 aa28.32■■■□□ 2.12
VPS16-207ENST00000481812 CRYBG1Q9Y4K1 1723 aa28.32■■■□□ 2.12
VPS16-207ENST00000481812 COG3Q96JB2 828 aa28.31■■■□□ 2.12
VPS16-207ENST00000481812 GGNBP2Q9H3C7 697 aa28.3■■■□□ 2.12
VPS16-207ENST00000481812 SLIT3O75094 1523 aa28.28■■■□□ 2.12
VPS16-207ENST00000481812 ZRANB1Q9UGI0 708 aa28.28■■■□□ 2.12
VPS16-207ENST00000481812 NUTM2GQ5VZR2 741 aa28.27■■■□□ 2.12
VPS16-207ENST00000481812 ABCA3Q99758 1704 aa28.26■■■□□ 2.12
VPS16-207ENST00000481812 PHRF1Q9P1Y6 1649 aaKnown RBP28.26■■■□□ 2.11
VPS16-207ENST00000481812 KCNH5Q8NCM2 988 aa28.25■■■□□ 2.11
VPS16-207ENST00000481812 SPATA31A6Q5VVP1 1343 aa28.23■■■□□ 2.11
VPS16-207ENST00000481812 CC2D1BQ5T0F9 858 aaKnown RBP28.22■■■□□ 2.11
VPS16-207ENST00000481812 MORC1Q86VD1 984 aa28.22■■■□□ 2.11
VPS16-207ENST00000481812 GCP02774 474 aa28.21■■■□□ 2.11
VPS16-207ENST00000481812 NFAT5O94916 1531 aa28.19■■■□□ 2.1
VPS16-207ENST00000481812 CABLES1Q8TDN4 633 aa28.19■■■□□ 2.1
VPS16-207ENST00000481812 AATKQ6ZMQ8 1374 aa28.19■■■□□ 2.1
VPS16-207ENST00000481812 PARD3Q8TEW0 1356 aa28.18■■■□□ 2.1
VPS16-207ENST00000481812 RALBP1Q15311 655 aa28.17■■■□□ 2.1
VPS16-207ENST00000481812 MAP2P11137 1827 aaKnown RBP28.16■■■□□ 2.1
VPS16-207ENST00000481812 CPDO75976 1380 aa28.15■■■□□ 2.1
VPS16-207ENST00000481812 HAP1P54257 671 aaPredicted RBP28.14■■■□□ 2.1
VPS16-207ENST00000481812 PRKRIP1Q9H875 184 aaPredicted RBP28.13■■■□□ 2.09
VPS16-207ENST00000481812 LTN1O94822 1766 aa28.11■■■□□ 2.09
VPS16-207ENST00000481812 DIEXFQ68CQ4 756 aaKnown RBP28.11■■■□□ 2.09
VPS16-207ENST00000481812 ARHGEF25Q86VW2 580 aa28.11■■■□□ 2.09
VPS16-207ENST00000481812 KIF24Q5T7B8 1368 aa28.11■■■□□ 2.09
VPS16-207ENST00000481812 ABCC6O95255 1503 aa28.09■■■□□ 2.09
VPS16-207ENST00000481812 ANP32CO43423 234 aa28.09■■■□□ 2.09
VPS16-207ENST00000481812 PLEKHG5O94827 1062 aa28.09■■■□□ 2.09
VPS16-207ENST00000481812 ILDR1Q86SU0 546 aaPredicted RBP28.09■■■□□ 2.09
VPS16-207ENST00000481812 ZC3H6P61129 1189 aaKnown RBP28.08■■■□□ 2.09
VPS16-207ENST00000481812 CNGB1Q14028 1251 aaPredicted RBP28.08■■■□□ 2.09
VPS16-207ENST00000481812 NUTM2BA6NNL0 878 aaPredicted RBP28.07■■■□□ 2.08
VPS16-207ENST00000481812 NUTM2EB1AL46 878 aaPredicted RBP28.07■■■□□ 2.08
VPS16-207ENST00000481812 SOX12O15370 315 aa28.07■■■□□ 2.08
VPS16-207ENST00000481812 TNNT2P45379 298 aaPredicted RBP28.07■■■□□ 2.08
VPS16-207ENST00000481812 NUTM2AQ8IVF1 878 aaPredicted RBP28.07■■■□□ 2.08
VPS16-207ENST00000481812 POLKQ9UBT6 870 aa28.07■■■□□ 2.08
VPS16-207ENST00000481812 KIAA0232Q92628 1395 aa28.07■■■□□ 2.08
VPS16-207ENST00000481812 SMG6Q86US8 1419 aaKnown RBP28.07■■■□□ 2.08
VPS16-207ENST00000481812 LRP6O75581 1613 aa28.07■■■□□ 2.08
VPS16-207ENST00000481812 MAP3K19Q56UN5 1328 aa28.06■■■□□ 2.08
VPS16-207ENST00000481812 COL18A1P39060 1754 aa28.06■■■□□ 2.08
VPS16-207ENST00000481812 RTL1A6NKG5 1358 aa28.05■■■□□ 2.08
VPS16-207ENST00000481812 FBLN1P23142 703 aa28.05■■■□□ 2.08
VPS16-207ENST00000481812 COL14A1Q05707 1796 aaKnown RBP28.05■■■□□ 2.08
VPS16-207ENST00000481812 PPP2R1AP30153 589 aa28.04■■■□□ 2.08
VPS16-207ENST00000481812 RRS1Q15050 365 aaKnown RBP28.04■■■□□ 2.08
VPS16-207ENST00000481812 MYBBP1AQ9BQG0 1328 aaKnown RBP28.03■■■□□ 2.08
VPS16-207ENST00000481812 PRDM11Q9NQV5 511 aa28.03■■■□□ 2.08
VPS16-207ENST00000481812 LMO7Q8WWI1 1683 aa28.02■■■□□ 2.08
VPS16-207ENST00000481812 ADAMTS2O95450 1211 aa28.01■■■□□ 2.07
VPS16-207ENST00000481812 IP6K1Q92551 441 aa28.01■■■□□ 2.07
VPS16-207ENST00000481812 EMILIN1Q9Y6C2 1016 aa28.01■■■□□ 2.07
VPS16-207ENST00000481812 PEAK1Q9H792 1746 aa28.01■■■□□ 2.07
VPS16-207ENST00000481812 FLT4P35916 1363 aa28■■■□□ 2.07
VPS16-207ENST00000481812 FAM83GA6ND36 823 aa28■■■□□ 2.07
VPS16-207ENST00000481812 AMPHP49418 695 aa28■■■□□ 2.07
VPS16-207ENST00000481812 MTHFSP49914 203 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms