RNA–Protein interactions for RNA: ENST00000481296.1

KDM4A-204, Transcript of lysine demethylase 4A, humanhuman

TSL 2

Gene KDM4A, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-204ENST00000481296 MED1Q15648 1581 aaPredicted RBP13.2□□□□□ -0.3
KDM4A-204ENST00000481296 NPHP3Q7Z494 1330 aa13.19□□□□□ -0.3
KDM4A-204ENST00000481296 SHPRHQ149N8 1683 aa13.19□□□□□ -0.3
KDM4A-204ENST00000481296 COL22A1Q8NFW1 1626 aaPredicted RBP13.19□□□□□ -0.3
KDM4A-204ENST00000481296 SSH2Q76I76 1423 aa13.19□□□□□ -0.3
KDM4A-204ENST00000481296 BRD4O60885 1362 aaPredicted RBP13.18□□□□□ -0.3
KDM4A-204ENST00000481296 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
KDM4A-204ENST00000481296 TNS3Q68CZ2 1445 aa13.17□□□□□ -0.3
KDM4A-204ENST00000481296 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
KDM4A-204ENST00000481296 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
KDM4A-204ENST00000481296 FOXO3O43524 673 aa13.16□□□□□ -0.3
KDM4A-204ENST00000481296 NSD2O96028 1365 aa13.16□□□□□ -0.3
KDM4A-204ENST00000481296 PIP4K2BP78356 416 aa13.15□□□□□ -0.3
KDM4A-204ENST00000481296 CARD14Q9BXL6 1004 aa13.15□□□□□ -0.3
KDM4A-204ENST00000481296 KNSTRNQ9Y448 316 aa13.15□□□□□ -0.3
KDM4A-204ENST00000481296 SBNO1A3KN83 1393 aa13.15□□□□□ -0.3
KDM4A-204ENST00000481296 CGNL1Q0VF96 1302 aa13.14□□□□□ -0.31
KDM4A-204ENST00000481296 TTC21AQ8NDW8 1320 aa13.14□□□□□ -0.31
KDM4A-204ENST00000481296 OVOS2A0A0J9YW53 1432 aa13.14□□□□□ -0.31
KDM4A-204ENST00000481296 OVOS2Q6IE36 1432 aa13.14□□□□□ -0.31
KDM4A-204ENST00000481296 XPCQ01831 940 aaPredicted RBP13.14□□□□□ -0.31
KDM4A-204ENST00000481296 PSME1Q06323 249 aa13.14□□□□□ -0.31
KDM4A-204ENST00000481296 DDX17Q92841 729 aaKnown RBP13.14□□□□□ -0.31
KDM4A-204ENST00000481296 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
KDM4A-204ENST00000481296 SLIT3O75094 1523 aa13.13□□□□□ -0.31
KDM4A-204ENST00000481296 NPC1L1Q9UHC9 1359 aa13.13□□□□□ -0.31
KDM4A-204ENST00000481296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.13□□□□□ -0.31
KDM4A-204ENST00000481296 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
KDM4A-204ENST00000481296 PER1O15534 1290 aaPredicted RBP13.12□□□□□ -0.31
KDM4A-204ENST00000481296 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
KDM4A-204ENST00000481296 KRT28Q7Z3Y7 464 aa13.12□□□□□ -0.31
KDM4A-204ENST00000481296 ARHGEF10O15013 1369 aa13.11□□□□□ -0.31
KDM4A-204ENST00000481296 NFAT5O94916 1531 aa13.11□□□□□ -0.31
KDM4A-204ENST00000481296 AMER1Q5JTC6 1135 aaPredicted RBP13.1□□□□□ -0.31
KDM4A-204ENST00000481296 DIEXFQ68CQ4 756 aaKnown RBP13.1□□□□□ -0.31
KDM4A-204ENST00000481296 NME9Q86XW9 330 aa13.1□□□□□ -0.31
KDM4A-204ENST00000481296 RGPD5Q99666 1765 aa13.09□□□□□ -0.31
KDM4A-204ENST00000481296 USP31Q70CQ4 1352 aa13.09□□□□□ -0.31
KDM4A-204ENST00000481296 CNGB1Q14028 1251 aaPredicted RBP13.09□□□□□ -0.31
KDM4A-204ENST00000481296 CC2D1BQ5T0F9 858 aaKnown RBP13.09□□□□□ -0.31
KDM4A-204ENST00000481296 PEAK1Q9H792 1746 aa13.09□□□□□ -0.31
KDM4A-204ENST00000481296 SPATA31A3Q5VYP0 1347 aa13.09□□□□□ -0.31
KDM4A-204ENST00000481296 PARD3Q8TEW0 1356 aa13.08□□□□□ -0.31
KDM4A-204ENST00000481296 GGNBP2Q9H3C7 697 aa13.08□□□□□ -0.32
KDM4A-204ENST00000481296 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.32
KDM4A-204ENST00000481296 FYB1O15117 783 aa13.07□□□□□ -0.32
KDM4A-204ENST00000481296 LMOD2Q6P5Q4 547 aa13.07□□□□□ -0.32
KDM4A-204ENST00000481296 ABTB2Q8N961 1025 aa13.07□□□□□ -0.32
KDM4A-204ENST00000481296 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
KDM4A-204ENST00000481296 FAM208AQ9UK61 1670 aaKnown RBP13.06□□□□□ -0.32
KDM4A-204ENST00000481296 COG3Q96JB2 828 aa13.06□□□□□ -0.32
KDM4A-204ENST00000481296 USP19O94966 1318 aa13.06□□□□□ -0.32
KDM4A-204ENST00000481296 ABCC6O95255 1503 aa13.05□□□□□ -0.32
KDM4A-204ENST00000481296 ANP32CO43423 234 aa13.05□□□□□ -0.32
KDM4A-204ENST00000481296 NLRP6P59044 892 aa13.05□□□□□ -0.32
KDM4A-204ENST00000481296 NUTM2GQ5VZR2 741 aa13.05□□□□□ -0.32
KDM4A-204ENST00000481296 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
KDM4A-204ENST00000481296 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
KDM4A-204ENST00000481296 COL18A1P39060 1754 aa13.04□□□□□ -0.32
KDM4A-204ENST00000481296 COL14A1Q05707 1796 aaKnown RBP13.04□□□□□ -0.32
KDM4A-204ENST00000481296 MORC1Q86VD1 984 aa13.04□□□□□ -0.32
KDM4A-204ENST00000481296 NLRP13Q86W25 1043 aa13.04□□□□□ -0.32
KDM4A-204ENST00000481296 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
KDM4A-204ENST00000481296 LMO7Q8WWI1 1683 aa13.04□□□□□ -0.32
KDM4A-204ENST00000481296 CDK12Q9NYV4 1490 aaPredicted RBP13.04□□□□□ -0.32
KDM4A-204ENST00000481296 PRKRIP1Q9H875 184 aaPredicted RBP13.03□□□□□ -0.32
KDM4A-204ENST00000481296 JCADQ9P266 1359 aa13.03□□□□□ -0.32
KDM4A-204ENST00000481296 NRAPQ86VF7 1730 aa13.02□□□□□ -0.32
KDM4A-204ENST00000481296 NWD2Q9ULI1 1742 aa13.02□□□□□ -0.32
KDM4A-204ENST00000481296 RGPD2P0DJD1 1756 aa13.02□□□□□ -0.32
KDM4A-204ENST00000481296 RALBP1Q15311 655 aa13.02□□□□□ -0.33
KDM4A-204ENST00000481296 AATKQ6ZMQ8 1374 aa13.02□□□□□ -0.33
KDM4A-204ENST00000481296 PLEKHG5O94827 1062 aa13.01□□□□□ -0.33
KDM4A-204ENST00000481296 HSPA1LP34931 641 aa13.01□□□□□ -0.33
KDM4A-204ENST00000481296 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
KDM4A-204ENST00000481296 MYBBP1AQ9BQG0 1328 aaKnown RBP13.01□□□□□ -0.33
KDM4A-204ENST00000481296 WNK3Q9BYP7 1800 aa13□□□□□ -0.33
KDM4A-204ENST00000481296 SOX12O15370 315 aa13□□□□□ -0.33
KDM4A-204ENST00000481296 FBXO41Q8TF61 875 aa13□□□□□ -0.33
KDM4A-204ENST00000481296 RGPD1P0DJD0 1748 aa12.99□□□□□ -0.33
KDM4A-204ENST00000481296 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.99□□□□□ -0.33
KDM4A-204ENST00000481296 CAMTA1Q9Y6Y1 1673 aa12.99□□□□□ -0.33
KDM4A-204ENST00000481296 RTL1A6NKG5 1358 aa12.99□□□□□ -0.33
KDM4A-204ENST00000481296 HAP1P54257 671 aaPredicted RBP12.99□□□□□ -0.33
KDM4A-204ENST00000481296 KCNH5Q8NCM2 988 aa12.99□□□□□ -0.33
KDM4A-204ENST00000481296 LRP6O75581 1613 aa12.99□□□□□ -0.33
KDM4A-204ENST00000481296 COL3A1P02461 1466 aaPredicted RBP12.98□□□□□ -0.33
KDM4A-204ENST00000481296 CABLES1Q8TDN4 633 aa12.98□□□□□ -0.33
KDM4A-204ENST00000481296 CPDO75976 1380 aa12.97□□□□□ -0.33
KDM4A-204ENST00000481296 PPP2R1AP30153 589 aa12.97□□□□□ -0.33
KDM4A-204ENST00000481296 FLT4P35916 1363 aa12.96□□□□□ -0.33
KDM4A-204ENST00000481296 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.33
KDM4A-204ENST00000481296 GCP02774 474 aa12.96□□□□□ -0.33
KDM4A-204ENST00000481296 RRS1Q15050 365 aaKnown RBP12.96□□□□□ -0.33
KDM4A-204ENST00000481296 KIAA0232Q92628 1395 aa12.95□□□□□ -0.34
KDM4A-204ENST00000481296 MAP3K19Q56UN5 1328 aa12.95□□□□□ -0.34
KDM4A-204ENST00000481296 SPATA31A6Q5VVP1 1343 aa12.95□□□□□ -0.34
KDM4A-204ENST00000481296 EMILIN1Q9Y6C2 1016 aa12.95□□□□□ -0.34
KDM4A-204ENST00000481296 BLMP54132 1417 aaPredicted RBP12.95□□□□□ -0.34
KDM4A-204ENST00000481296 ZBTB7CA1YPR0 619 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms