RNA–Protein interactions for RNA: ENST00000480645.1

PLXNA3-204, Transcript of plexin A3, humanhuman

TSL 3

Gene PLXNA3, Length 160 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-204ENST00000480645 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
PLXNA3-204ENST00000480645 CHD2O14647 1828 aaKnown RBP13.44□□□□□ -0.26
PLXNA3-204ENST00000480645 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
PLXNA3-204ENST00000480645 LRRC7Q96NW7 1537 aa13.44□□□□□ -0.26
PLXNA3-204ENST00000480645 GOLGA2Q08379 1002 aa13.43□□□□□ -0.26
PLXNA3-204ENST00000480645 OVOS2A0A0J9YW53 1432 aa13.42□□□□□ -0.26
PLXNA3-204ENST00000480645 OVOS2Q6IE36 1432 aa13.42□□□□□ -0.26
PLXNA3-204ENST00000480645 KCNA6P17658 529 aa13.42□□□□□ -0.26
PLXNA3-204ENST00000480645 SALL2Q9Y467 1007 aaPredicted RBP13.42□□□□□ -0.26
PLXNA3-204ENST00000480645 NALCNQ8IZF0 1738 aa13.42□□□□□ -0.26
PLXNA3-204ENST00000480645 TTC21AQ8NDW8 1320 aa13.41□□□□□ -0.26
PLXNA3-204ENST00000480645 SSH2Q76I76 1423 aa13.41□□□□□ -0.26
PLXNA3-204ENST00000480645 ADGRL3Q9HAR2 1447 aa13.41□□□□□ -0.26
PLXNA3-204ENST00000480645 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.41□□□□□ -0.26
PLXNA3-204ENST00000480645 CCDC146Q8IYE0 955 aa13.41□□□□□ -0.26
PLXNA3-204ENST00000480645 COG3Q96JB2 828 aa13.41□□□□□ -0.26
PLXNA3-204ENST00000480645 RCAN3Q9UKA8 241 aa13.41□□□□□ -0.26
PLXNA3-204ENST00000480645 ACEP12821 1306 aa13.4□□□□□ -0.26
PLXNA3-204ENST00000480645 APAF1O14727 1248 aa13.4□□□□□ -0.26
PLXNA3-204ENST00000480645 CCDC27Q2M243 656 aa13.4□□□□□ -0.26
PLXNA3-204ENST00000480645 PNNQ9H307 717 aaKnown RBP13.4□□□□□ -0.26
PLXNA3-204ENST00000480645 TTC21BQ7Z4L5 1316 aa13.39□□□□□ -0.27
PLXNA3-204ENST00000480645 E9PSI1 815 aa13.39□□□□□ -0.27
PLXNA3-204ENST00000480645 DIAPH1O60610 1272 aaKnown RBP13.39□□□□□ -0.27
PLXNA3-204ENST00000480645 RRP1P56182 461 aaKnown RBP13.39□□□□□ -0.27
PLXNA3-204ENST00000480645 PPP4R2Q9NY27 417 aa13.39□□□□□ -0.27
PLXNA3-204ENST00000480645 USP54Q70EL1 1684 aa13.39□□□□□ -0.27
PLXNA3-204ENST00000480645 SENP3-EIF4A1A0A087X0R7 540 aa13.38□□□□□ -0.27
PLXNA3-204ENST00000480645 U2AF1L5P0DN76 240 aaPredicted RBP13.38□□□□□ -0.27
PLXNA3-204ENST00000480645 U2AF1Q01081 240 aaKnown RBP eCLIP13.38□□□□□ -0.27
PLXNA3-204ENST00000480645 NME9Q86XW9 330 aa13.38□□□□□ -0.27
PLXNA3-204ENST00000480645 CDCA7LQ96GN5 454 aa13.38□□□□□ -0.27
PLXNA3-204ENST00000480645 USP31Q70CQ4 1352 aa13.37□□□□□ -0.27
PLXNA3-204ENST00000480645 SLFN5Q08AF3 891 aa13.37□□□□□ -0.27
PLXNA3-204ENST00000480645 DUSP27Q5VZP5 1158 aa13.37□□□□□ -0.27
PLXNA3-204ENST00000480645 PHF23Q9BUL5 403 aaPredicted RBP13.37□□□□□ -0.27
PLXNA3-204ENST00000480645 POLKQ9UBT6 870 aa13.37□□□□□ -0.27
PLXNA3-204ENST00000480645 NCKAP5LQ9HCH0 1330 aa13.37□□□□□ -0.27
PLXNA3-204ENST00000480645 TRMT2AQ8IZ69 625 aaKnown RBP13.36□□□□□ -0.27
PLXNA3-204ENST00000480645 MAPK8IP3Q9UPT6 1336 aa13.36□□□□□ -0.27
PLXNA3-204ENST00000480645 IRX6P78412 446 aaPredicted RBP13.35□□□□□ -0.27
PLXNA3-204ENST00000480645 TCP11L2Q8N4U5 519 aa13.35□□□□□ -0.27
PLXNA3-204ENST00000480645 U2SURPO15042 1029 aaKnown RBP13.34□□□□□ -0.27
PLXNA3-204ENST00000480645 WDR63Q8IWG1 891 aa13.34□□□□□ -0.27
PLXNA3-204ENST00000480645 WWC1Q8IX03 1113 aa13.34□□□□□ -0.27
PLXNA3-204ENST00000480645 FCHSD2O94868 740 aa13.33□□□□□ -0.28
PLXNA3-204ENST00000480645 NGDNQ8NEJ9 315 aaKnown RBP13.33□□□□□ -0.28
PLXNA3-204ENST00000480645 PLEKHF1Q96S99 279 aa13.33□□□□□ -0.28
PLXNA3-204ENST00000480645 PIK3C2AO00443 1686 aa13.33□□□□□ -0.28
PLXNA3-204ENST00000480645 NEFMP07197 916 aa13.32□□□□□ -0.28
PLXNA3-204ENST00000480645 KIF24Q5T7B8 1368 aa13.32□□□□□ -0.28
PLXNA3-204ENST00000480645 NCOA3Q9Y6Q9 1424 aa13.31□□□□□ -0.28
PLXNA3-204ENST00000480645 NUTM2FA1L443 756 aa13.31□□□□□ -0.28
PLXNA3-204ENST00000480645 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.31□□□□□ -0.28
PLXNA3-204ENST00000480645 EMILIN1Q9Y6C2 1016 aa13.31□□□□□ -0.28
PLXNA3-204ENST00000480645 MAP2P11137 1827 aaKnown RBP13.31□□□□□ -0.28
PLXNA3-204ENST00000480645 DCCP43146 1447 aa13.3□□□□□ -0.28
PLXNA3-204ENST00000480645 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
PLXNA3-204ENST00000480645 IL16Q14005 1332 aa13.3□□□□□ -0.28
PLXNA3-204ENST00000480645 KIF1AQ12756 1690 aa13.3□□□□□ -0.28
PLXNA3-204ENST00000480645 RGPD8O14715 1765 aaPredicted RBP13.3□□□□□ -0.28
PLXNA3-204ENST00000480645 IL13P35225 146 aa13.29□□□□□ -0.28
PLXNA3-204ENST00000480645 PMFBP1Q8TBY8 1022 aa13.29□□□□□ -0.28
PLXNA3-204ENST00000480645 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
PLXNA3-204ENST00000480645 ZRANB1Q9UGI0 708 aa13.29□□□□□ -0.28
PLXNA3-204ENST00000480645 SBNO1A3KN83 1393 aa13.29□□□□□ -0.28
PLXNA3-204ENST00000480645 FLT4P35916 1363 aa13.29□□□□□ -0.28
PLXNA3-204ENST00000480645 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
PLXNA3-204ENST00000480645 TMPOP42166 694 aaKnown RBP13.28□□□□□ -0.28
PLXNA3-204ENST00000480645 PHF8Q9UPP1 1060 aa13.28□□□□□ -0.28
PLXNA3-204ENST00000480645 CT47B1P0C2W7 299 aaPredicted RBP13.27□□□□□ -0.29
PLXNA3-204ENST00000480645 RRP7AQ9Y3A4 280 aaKnown RBP13.27□□□□□ -0.29
PLXNA3-204ENST00000480645 RTL1A6NKG5 1358 aa13.27□□□□□ -0.29
PLXNA3-204ENST00000480645 RGPD1P0DJD0 1748 aa13.27□□□□□ -0.29
PLXNA3-204ENST00000480645 PEAK1Q9H792 1746 aa13.27□□□□□ -0.29
PLXNA3-204ENST00000480645 ARHGEF10O15013 1369 aa13.26□□□□□ -0.29
PLXNA3-204ENST00000480645 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
PLXNA3-204ENST00000480645 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
PLXNA3-204ENST00000480645 MARF1Q9Y4F3 1742 aaKnown RBP13.26□□□□□ -0.29
PLXNA3-204ENST00000480645 PRKAR2BP31323 418 aa13.25□□□□□ -0.29
PLXNA3-204ENST00000480645 CALD1Q05682 793 aaKnown RBP13.25□□□□□ -0.29
PLXNA3-204ENST00000480645 LMOD3Q0VAK6 560 aa13.25□□□□□ -0.29
PLXNA3-204ENST00000480645 NEUROD2Q15784 382 aa13.25□□□□□ -0.29
PLXNA3-204ENST00000480645 C14orf37Q86TY3 774 aa13.25□□□□□ -0.29
PLXNA3-204ENST00000480645 DMRT2Q9Y5R5 561 aa13.25□□□□□ -0.29
PLXNA3-204ENST00000480645 LMTK3Q96Q04 1460 aa13.24□□□□□ -0.29
PLXNA3-204ENST00000480645 MAP3K19Q56UN5 1328 aa13.23□□□□□ -0.29
PLXNA3-204ENST00000480645 NFE2L2Q16236 605 aa13.23□□□□□ -0.29
PLXNA3-204ENST00000480645 CCDC136Q96JN2 1154 aa13.23□□□□□ -0.29
PLXNA3-204ENST00000480645 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
PLXNA3-204ENST00000480645 MST1RQ04912 1400 aa13.22□□□□□ -0.29
PLXNA3-204ENST00000480645 PHRF1Q9P1Y6 1649 aaKnown RBP13.22□□□□□ -0.29
PLXNA3-204ENST00000480645 FBLN1P23142 703 aa13.22□□□□□ -0.29
PLXNA3-204ENST00000480645 RIPK4P57078 832 aa13.22□□□□□ -0.29
PLXNA3-204ENST00000480645 EIF4A2Q14240 407 aaKnown RBP13.22□□□□□ -0.29
PLXNA3-204ENST00000480645 PROSER2Q86WR7 435 aaPredicted RBP13.22□□□□□ -0.29
PLXNA3-204ENST00000480645 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
PLXNA3-204ENST00000480645 FANCIQ9NVI1 1328 aa13.21□□□□□ -0.29
PLXNA3-204ENST00000480645 NLRP6P59044 892 aa13.21□□□□□ -0.29
PLXNA3-204ENST00000480645 B4GALNT3Q6L9W6 998 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms