RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 FCHSD2O94868 740 aa7.33□□□□□ -1.24
PRPF4B-205ENST00000480058 TUBBP07437 444 aa7.33□□□□□ -1.24
PRPF4B-205ENST00000480058 CALCOCO1Q9P1Z2 691 aa7.33□□□□□ -1.24
PRPF4B-205ENST00000480058 BRPF3Q9ULD4 1205 aa7.33□□□□□ -1.24
PRPF4B-205ENST00000480058 ALDH1L2Q3SY69 923 aa7.33□□□□□ -1.24
PRPF4B-205ENST00000480058 TOMM22Q9NS69 142 aa7.33□□□□□ -1.24
PRPF4B-205ENST00000480058 RRP12Q5JTH9 1297 aaKnown RBP7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 CYP46A1Q9Y6A2 500 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 ATAD2Q6PL18 1390 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 ERICH2A1L162 156 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 CTAGE5O15320 804 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 SH2B1Q9NRF2 756 aaPredicted RBP7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 MCM3P25205 808 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 NOL8Q76FK4 1167 aaKnown RBP7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 GOLGA6L9A6NEM1 432 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 MTHFSP49914 203 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 ZNHIT6Q9NWK9 470 aaKnown RBP7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 ELL2O00472 640 aaPredicted RBP7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 DYNC1I1O14576 645 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 PRPF40AO75400 957 aaKnown RBP7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 PAK3O75914 559 aaPredicted RBP7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 GNAI2P04899 355 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 TERF1P54274 439 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 SLFN5Q08AF3 891 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 TTC5Q8N0Z6 440 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 PANK1Q8TE04 598 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 UBXN4Q92575 508 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 SMTNL1A8MU46 457 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 KLHL40Q2TBA0 621 aa7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 NOL10Q9BSC4 688 aaKnown RBP7.32□□□□□ -1.24
PRPF4B-205ENST00000480058 FILIP1Q7Z7B0 1213 aa7.31□□□□□ -1.24
PRPF4B-205ENST00000480058 OFD1O75665 1012 aa7.31□□□□□ -1.24
PRPF4B-205ENST00000480058 CTNNA3Q9UI47 895 aa7.31□□□□□ -1.24
PRPF4B-205ENST00000480058 TXLNAP40222 546 aa7.31□□□□□ -1.24
PRPF4B-205ENST00000480058 CHMP3Q9Y3E7 222 aa7.31□□□□□ -1.24
PRPF4B-205ENST00000480058 GPRASP1Q5JY77 1395 aa7.31□□□□□ -1.24
PRPF4B-205ENST00000480058 AEBP2Q6ZN18 517 aaPredicted RBP7.31□□□□□ -1.24
PRPF4B-205ENST00000480058 CDKL5O76039 1030 aa7.31□□□□□ -1.24
PRPF4B-205ENST00000480058 DAPK1P53355 1430 aa7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 PES1O00541 588 aaKnown RBP7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 ZSCAN12O43309 604 aa7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 STK38Q15208 465 aa7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 RUSC2Q8N2Y8 1516 aa7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 POTEB2H3BUK9 544 aa7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 TWISTNBQ3B726 338 aaPredicted RBP7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 HMGB2P26583 209 aaKnown RBP7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 BMP2KLQ5H9B9 411 aa7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 DDX11Q96FC9 970 aa7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 DEF6Q9H4E7 631 aa7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 ERLIN2O94905 339 aa7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 RNF214Q8ND24 703 aa7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 SOX12O15370 315 aa7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 GSDMDP57764 484 aa7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 EXOSC9Q06265 439 aaKnown RBP7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 CHD1LQ86WJ1 897 aa7.3□□□□□ -1.24
PRPF4B-205ENST00000480058 SURF6O75683 361 aaKnown RBP7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 KLHL34Q8N239 644 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 KIF18AQ8NI77 898 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 DDX19AQ9NUU7 478 aaKnown RBP7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 TSPYL4Q9UJ04 414 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 FANCD2Q9BXW9 1451 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 KIAA0754O94854 1291 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 ARID3AQ99856 593 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 SMARCA4P51532 1647 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 AQRO60306 1485 aaKnown RBP eCLIP7.29□□□□□ -1.242e-7■■■■■ 85.8
PRPF4B-205ENST00000480058 GAPVD1Q14C86 1478 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 IL16Q14005 1332 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 CCDC83Q8IWF9 413 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 NUP62CLQ9H1M0 184 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 STIM1Q13586 685 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 ARHGAP45Q92619 1136 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 TROQ12816 1431 aaPredicted RBP7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 INSRP06213 1382 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 NCBP3Q53F19 620 aaKnown RBP7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 CDCA7LQ96GN5 454 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 ARAP1Q96P48 1450 aa7.29□□□□□ -1.24
PRPF4B-205ENST00000480058 MAP3K11Q16584 847 aa7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 TMCO3Q6UWJ1 677 aa7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 PUS7Q96PZ0 661 aaKnown RBP7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 TNMDQ9H2S6 317 aa7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 SFPQP23246 707 aaKnown RBP eCLIP7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 GTF2E1P29083 439 aaPredicted RBP7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 BLOC1S2Q6QNY1 142 aa7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 FOXD4L5Q5VV16 416 aaPredicted RBP7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 TRIM22Q8IYM9 498 aa7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 FOXD4L4Q8WXT5 416 aaPredicted RBP7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 FGD5Q6ZNL6 1462 aa7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 MAP9Q49MG5 647 aa7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 LRRCC1Q9C099 1032 aa7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 TBC1D2BQ9UPU7 963 aa7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 NSD2O96028 1365 aa7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 LRPPRCP42704 1394 aaKnown RBP7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 GLRX3O76003 335 aaKnown RBP7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 ZRSR2Q15696 482 aaKnown RBP7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 PPFIBP1Q86W92 1011 aa7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 WASF1Q92558 559 aa7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 FSD1Q9BTV5 496 aa7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 CGNQ9P2M7 1197 aaKnown RBP7.28□□□□□ -1.24
PRPF4B-205ENST00000480058 GOLGA6L10A6NI86 522 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms