RNA–Protein interactions for RNA: ENST00000479452.5

EXD3-208, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene EXD3, Length 962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-208ENST00000479452 ABTB2Q8N961 1025 aa30.01■■■□□ 2.39
EXD3-208ENST00000479452 ATRNO75882 1429 aa30.01■■■□□ 2.39
EXD3-208ENST00000479452 NUTM2GQ5VZR2 741 aa30■■■□□ 2.39
EXD3-208ENST00000479452 CCDC9Q9Y3X0 531 aaKnown RBP30■■■□□ 2.39
EXD3-208ENST00000479452 QRICH2Q9H0J4 1663 aa29.99■■■□□ 2.39
EXD3-208ENST00000479452 SLIT2O94813 1529 aa29.96■■■□□ 2.39
EXD3-208ENST00000479452 RALGAPBQ86X10 1494 aa29.96■■■□□ 2.39
EXD3-208ENST00000479452 RGS12O14924 1447 aa29.96■■■□□ 2.39
EXD3-208ENST00000479452 PRDM11Q9NQV5 511 aa29.95■■■□□ 2.39
EXD3-208ENST00000479452 TRPM3Q9HCF6 1732 aaPredicted RBP29.95■■■□□ 2.38
EXD3-208ENST00000479452 NLRP13Q86W25 1043 aa29.94■■■□□ 2.38
EXD3-208ENST00000479452 ZNF692Q9BU19 519 aaPredicted RBP29.94■■■□□ 2.38
EXD3-208ENST00000479452 BTG4Q9NY30 223 aa29.94■■■□□ 2.38
EXD3-208ENST00000479452 BRD4O60885 1362 aaPredicted RBP29.93■■■□□ 2.38
EXD3-208ENST00000479452 VPS72Q15906 364 aa29.93■■■□□ 2.38
EXD3-208ENST00000479452 CLSPNQ9HAW4 1339 aa29.93■■■□□ 2.38
EXD3-208ENST00000479452 UPF1Q92900 1129 aaKnown RBP eCLIP29.92■■■□□ 2.38
EXD3-208ENST00000479452 TIMELESSQ9UNS1 1208 aa29.92■■■□□ 2.38
EXD3-208ENST00000479452 MARF1Q9Y4F3 1742 aaKnown RBP29.92■■■□□ 2.38
EXD3-208ENST00000479452 ATAD2Q6PL18 1390 aa29.91■■■□□ 2.38
EXD3-208ENST00000479452 SLC24A1O60721 1099 aa29.9■■■□□ 2.38
EXD3-208ENST00000479452 ALS2Q96Q42 1657 aa29.9■■■□□ 2.38
EXD3-208ENST00000479452 TOPAZ1Q8N9V7 1692 aa29.89■■■□□ 2.38
EXD3-208ENST00000479452 ZC3H6P61129 1189 aaKnown RBP29.89■■■□□ 2.38
EXD3-208ENST00000479452 SBNO2Q9Y2G9 1366 aa29.89■■■□□ 2.37
EXD3-208ENST00000479452 CCER1Q8TC90 406 aaPredicted RBP29.88■■■□□ 2.37
EXD3-208ENST00000479452 NLRP6P59044 892 aa29.87■■■□□ 2.37
EXD3-208ENST00000479452 TMC1Q8TDI8 760 aa29.87■■■□□ 2.37
EXD3-208ENST00000479452 KIAA0232Q92628 1395 aa29.85■■■□□ 2.37
EXD3-208ENST00000479452 USP6P35125 1406 aa29.85■■■□□ 2.37
EXD3-208ENST00000479452 ST20-MTHFSA0A0A6YYL1 179 aa29.84■■■□□ 2.37
EXD3-208ENST00000479452 CHRNA2Q15822 529 aa29.84■■■□□ 2.37
EXD3-208ENST00000479452 A0A0G2JS52 829 aa29.83■■■□□ 2.37
EXD3-208ENST00000479452 MYT1Q01538 1121 aa29.83■■■□□ 2.37
EXD3-208ENST00000479452 GCP02774 474 aa29.82■■■□□ 2.36
EXD3-208ENST00000479452 EVA1CP58658 441 aa29.82■■■□□ 2.36
EXD3-208ENST00000479452 ABCA3Q99758 1704 aa29.8■■■□□ 2.36
EXD3-208ENST00000479452 SEPT12Q8IYM1 358 aa29.8■■■□□ 2.36
EXD3-208ENST00000479452 STRN4Q9NRL3 753 aa29.8■■■□□ 2.36
EXD3-208ENST00000479452 KTN1Q86UP2 1357 aaKnown RBP29.79■■■□□ 2.36
EXD3-208ENST00000479452 HDGFL2Q7Z4V5 671 aaPredicted RBP29.79■■■□□ 2.36
EXD3-208ENST00000479452 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.79■■■□□ 2.36
EXD3-208ENST00000479452 USP19O94966 1318 aa29.78■■■□□ 2.36
EXD3-208ENST00000479452 TTC21BQ7Z4L5 1316 aa29.78■■■□□ 2.36
EXD3-208ENST00000479452 ZBTB7CA1YPR0 619 aa29.78■■■□□ 2.36
EXD3-208ENST00000479452 PUS7Q96PZ0 661 aaKnown RBP29.78■■■□□ 2.36
EXD3-208ENST00000479452 COL14A1Q05707 1796 aaKnown RBP29.77■■■□□ 2.36
EXD3-208ENST00000479452 TTC21AQ8NDW8 1320 aa29.76■■■□□ 2.36
EXD3-208ENST00000479452 TERF2IPQ9NYB0 399 aa29.76■■■□□ 2.35
EXD3-208ENST00000479452 ONECUT3O60422 494 aaPredicted RBP29.75■■■□□ 2.35
EXD3-208ENST00000479452 FAM98CQ17RN3 349 aaKnown RBP29.75■■■□□ 2.35
EXD3-208ENST00000479452 NWD2Q9ULI1 1742 aa29.75■■■□□ 2.35
EXD3-208ENST00000479452 PLCH1Q4KWH8 1693 aa29.75■■■□□ 2.35
EXD3-208ENST00000479452 SLC12A5Q9H2X9 1139 aa29.74■■■□□ 2.35
EXD3-208ENST00000479452 TESK2Q96S53 571 aa29.73■■■□□ 2.35
EXD3-208ENST00000479452 SPATA31A5Q5VU36 1347 aa29.72■■■□□ 2.35
EXD3-208ENST00000479452 SPATA31A7Q8IWB4 1347 aa29.72■■■□□ 2.35
EXD3-208ENST00000479452 TMF1P82094 1093 aa29.72■■■□□ 2.35
EXD3-208ENST00000479452 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.72■■■□□ 2.35
EXD3-208ENST00000479452 KCNH5Q8NCM2 988 aa29.72■■■□□ 2.35
EXD3-208ENST00000479452 CPDO75976 1380 aa29.72■■■□□ 2.35
EXD3-208ENST00000479452 GLI3P10071 1580 aa29.72■■■□□ 2.35
EXD3-208ENST00000479452 CPSF1Q10570 1443 aaKnown RBP29.71■■■□□ 2.35
EXD3-208ENST00000479452 SSH2Q76I76 1423 aa29.71■■■□□ 2.35
EXD3-208ENST00000479452 USP47Q96K76 1375 aa29.71■■■□□ 2.35
EXD3-208ENST00000479452 KRT27Q7Z3Y8 459 aa29.7■■■□□ 2.35
EXD3-208ENST00000479452 CCDC125Q86Z20 511 aa29.69■■■□□ 2.34
EXD3-208ENST00000479452 SOX12O15370 315 aa29.68■■■□□ 2.34
EXD3-208ENST00000479452 USP35Q9P2H5 1018 aa29.67■■■□□ 2.34
EXD3-208ENST00000479452 CRYBG1Q9Y4K1 1723 aa29.67■■■□□ 2.34
EXD3-208ENST00000479452 PHRF1Q9P1Y6 1649 aaKnown RBP29.67■■■□□ 2.34
EXD3-208ENST00000479452 CDCA8Q53HL2 280 aa29.66■■■□□ 2.34
EXD3-208ENST00000479452 SPATA31A1Q5TZJ5 1347 aa29.65■■■□□ 2.34
EXD3-208ENST00000479452 NINLQ9Y2I6 1382 aa29.64■■■□□ 2.33
EXD3-208ENST00000479452 NRKQ7Z2Y5 1582 aa29.63■■■□□ 2.33
EXD3-208ENST00000479452 SF3B2Q13435 895 aaKnown RBP29.62■■■□□ 2.33
EXD3-208ENST00000479452 LARP1Q6PKG0 1096 aaKnown RBP29.62■■■□□ 2.33
EXD3-208ENST00000479452 AATKQ6ZMQ8 1374 aa29.61■■■□□ 2.33
EXD3-208ENST00000479452 NRAPQ86VF7 1730 aa29.6■■■□□ 2.33
EXD3-208ENST00000479452 NME9Q86XW9 330 aa29.6■■■□□ 2.33
EXD3-208ENST00000479452 ARHGEF25Q86VW2 580 aa29.58■■■□□ 2.33
EXD3-208ENST00000479452 TCP11L2Q8N4U5 519 aa29.58■■■□□ 2.33
EXD3-208ENST00000479452 ZRANB1Q9UGI0 708 aa29.58■■■□□ 2.33
EXD3-208ENST00000479452 SLIT3O75094 1523 aa29.57■■■□□ 2.32
EXD3-208ENST00000479452 EDC4Q6P2E9 1401 aaKnown RBP29.57■■■□□ 2.32
EXD3-208ENST00000479452 A0A1W2PP64 1363 aa29.57■■■□□ 2.32
EXD3-208ENST00000479452 CAMTA1Q9Y6Y1 1673 aa29.56■■■□□ 2.32
EXD3-208ENST00000479452 CD163L1Q9NR16 1453 aa29.56■■■□□ 2.32
EXD3-208ENST00000479452 BARGINQ6ZT62 677 aa29.56■■■□□ 2.32
EXD3-208ENST00000479452 THRAP3Q9Y2W1 955 aaKnown RBP29.56■■■□□ 2.32
EXD3-208ENST00000479452 TOM1L2Q6ZVM7 507 aa29.55■■■□□ 2.32
EXD3-208ENST00000479452 PIK3C2AO00443 1686 aa29.55■■■□□ 2.32
EXD3-208ENST00000479452 AKAP12Q02952 1782 aa29.54■■■□□ 2.32
EXD3-208ENST00000479452 USP31Q70CQ4 1352 aa29.54■■■□□ 2.32
EXD3-208ENST00000479452 CSB-PGBD3P0DP91 1061 aa29.54■■■□□ 2.32
EXD3-208ENST00000479452 PDE3BQ13370 1112 aa29.53■■■□□ 2.32
EXD3-208ENST00000479452 AXIN2Q9Y2T1 843 aa29.52■■■□□ 2.32
EXD3-208ENST00000479452 BLMP54132 1417 aaPredicted RBP29.52■■■□□ 2.32
EXD3-208ENST00000479452 COL5A2P05997 1499 aaPredicted RBP29.5■■■□□ 2.31
EXD3-208ENST00000479452 COG3Q96JB2 828 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms