RNA–Protein interactions for RNA: ENST00000479176.5

FXR1-213, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-213ENST00000479176 NPHP3Q7Z494 1330 aa15.18■□□□□ 0.02
FXR1-213ENST00000479176 MINK1Q8N4C8 1332 aaPredicted RBP15.18■□□□□ 0.02
FXR1-213ENST00000479176 CIZ1Q9ULV3 898 aaPredicted RBP15.18■□□□□ 0.02
FXR1-213ENST00000479176 EIF3AQ14152 1382 aaKnown RBP15.18■□□□□ 0.02
FXR1-213ENST00000479176 PNPLA6Q8IY17 1366 aa15.18■□□□□ 0.02
FXR1-213ENST00000479176 TONSLQ96HA7 1378 aa15.18■□□□□ 0.02
FXR1-213ENST00000479176 COL22A1Q8NFW1 1626 aaPredicted RBP15.17■□□□□ 0.02
FXR1-213ENST00000479176 QRICH2Q9H0J4 1663 aa15.17■□□□□ 0.02
FXR1-213ENST00000479176 GPRASP1Q5JY77 1395 aa15.17■□□□□ 0.02
FXR1-213ENST00000479176 WASLO00401 505 aaPredicted RBP15.17■□□□□ 0.02
FXR1-213ENST00000479176 NBPF8Q3BBV2 869 aa15.17■□□□□ 0.02
FXR1-213ENST00000479176 HIRIP3Q9BW71 556 aaPredicted RBP15.17■□□□□ 0.02
FXR1-213ENST00000479176 FOXO3O43524 673 aa15.16■□□□□ 0.02
FXR1-213ENST00000479176 ILDR2Q71H61 639 aa15.16■□□□□ 0.02
FXR1-213ENST00000479176 ITSN1Q15811 1721 aa15.16■□□□□ 0.02
FXR1-213ENST00000479176 PRR36Q9H6K5 1346 aa15.16■□□□□ 0.02
FXR1-213ENST00000479176 GSE1Q14687 1217 aa15.15■□□□□ 0.02
FXR1-213ENST00000479176 RGS17Q9UGC6 210 aaPredicted RBP15.15■□□□□ 0.02
FXR1-213ENST00000479176 PHF8Q9UPP1 1060 aa15.15■□□□□ 0.02
FXR1-213ENST00000479176 ATP7BP35670 1465 aa15.14■□□□□ 0.01
FXR1-213ENST00000479176 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
FXR1-213ENST00000479176 ROCK2O75116 1388 aaKnown RBP15.14■□□□□ 0.01
FXR1-213ENST00000479176 TOPAZ1Q8N9V7 1692 aa15.14■□□□□ 0.01
FXR1-213ENST00000479176 FAM212AQ96EL1 285 aa15.14■□□□□ 0.01
FXR1-213ENST00000479176 CENPJQ9HC77 1338 aaPredicted RBP15.14■□□□□ 0.01
FXR1-213ENST00000479176 DCAF8Q5TAQ9 597 aa15.13■□□□□ 0.01
FXR1-213ENST00000479176 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
FXR1-213ENST00000479176 RASEFQ8IZ41 740 aa15.12■□□□□ 0.01
FXR1-213ENST00000479176 TRPM3Q9HCF6 1732 aaPredicted RBP15.12■□□□□ 0.01
FXR1-213ENST00000479176 XPCQ01831 940 aaPredicted RBP15.11■□□□□ 0.01
FXR1-213ENST00000479176 CDK19Q9BWU1 502 aa15.11■□□□□ 0.01
FXR1-213ENST00000479176 KRT28Q7Z3Y7 464 aa15.1■□□□□ 0.01
FXR1-213ENST00000479176 SPATA31A3Q5VYP0 1347 aa15.1■□□□□ 0.01
FXR1-213ENST00000479176 NUDT16Q96DE0 195 aaKnown RBP15.09■□□□□ 0.01
FXR1-213ENST00000479176 SBNO1A3KN83 1393 aa15.09■□□□□ 0.01
FXR1-213ENST00000479176 MARF1Q9Y4F3 1742 aaKnown RBP15.09■□□□□ 0.01
FXR1-213ENST00000479176 TNS3Q68CZ2 1445 aa15.09■□□□□ 0.01
FXR1-213ENST00000479176 NUTM2BA6NNL0 878 aaPredicted RBP15.08■□□□□ 0
FXR1-213ENST00000479176 NUTM2EB1AL46 878 aaPredicted RBP15.08■□□□□ 0
FXR1-213ENST00000479176 NUTM2AQ8IVF1 878 aaPredicted RBP15.08■□□□□ 0
FXR1-213ENST00000479176 PMFBP1Q8TBY8 1022 aa15.08■□□□□ 0
FXR1-213ENST00000479176 ALS2Q96Q42 1657 aa15.07■□□□□ 0
FXR1-213ENST00000479176 ECM2O94769 699 aaPredicted RBP15.07■□□□□ 0
FXR1-213ENST00000479176 PSME1Q06323 249 aa15.07■□□□□ 0
FXR1-213ENST00000479176 MEX3CQ5U5Q3 659 aaKnown RBP15.07■□□□□ 0
FXR1-213ENST00000479176 SBNO2Q9Y2G9 1366 aa15.07■□□□□ 0
FXR1-213ENST00000479176 ABCA3Q99758 1704 aa15.06■□□□□ 0
FXR1-213ENST00000479176 CARD11Q9BXL7 1154 aa15.06■□□□□ 0
FXR1-213ENST00000479176 TIMELESSQ9UNS1 1208 aa15.06■□□□□ 0
FXR1-213ENST00000479176 POTEAQ6S8J7 498 aa15.05■□□□□ -0
FXR1-213ENST00000479176 CCDC61Q9Y6R9 512 aa15.05■□□□□ -0
FXR1-213ENST00000479176 POLR3AO14802 1390 aaPredicted RBP15.05■□□□□ -0
FXR1-213ENST00000479176 ARHGEF10O15013 1369 aa15.04■□□□□ -0
FXR1-213ENST00000479176 PLEKHG3A1L390 1219 aa15.04■□□□□ -0
FXR1-213ENST00000479176 SRPK2P78362 688 aaKnown RBP15.03■□□□□ -0
FXR1-213ENST00000479176 CRYBG1Q9Y4K1 1723 aa15.03■□□□□ -0
FXR1-213ENST00000479176 PPIP5K1Q6PFW1 1433 aa15.02■□□□□ -0
FXR1-213ENST00000479176 AFF2P51816 1311 aa15.02■□□□□ -0
FXR1-213ENST00000479176 EVC2Q86UK5 1308 aa15.02■□□□□ -0
FXR1-213ENST00000479176 ZNF772Q68DY9 489 aaPredicted RBP15.02■□□□□ -0
FXR1-213ENST00000479176 NGDNQ8NEJ9 315 aaKnown RBP15.02■□□□□ -0
FXR1-213ENST00000479176 CABP2Q9NPB3 220 aa15.02■□□□□ -0
FXR1-213ENST00000479176 ADAMTS2O95450 1211 aa15.01□□□□□ -0.01
FXR1-213ENST00000479176 C8orf37Q96NL8 207 aa15.01□□□□□ -0.01
FXR1-213ENST00000479176 TSPYL2Q9H2G4 693 aaPredicted RBP15.01□□□□□ -0.01
FXR1-213ENST00000479176 ACEP12821 1306 aa15□□□□□ -0.01
FXR1-213ENST00000479176 SOCS7O14512 581 aa15□□□□□ -0.01
FXR1-213ENST00000479176 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
FXR1-213ENST00000479176 CCER1Q8TC90 406 aaPredicted RBP14.99□□□□□ -0.01
FXR1-213ENST00000479176 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.98□□□□□ -0.01
FXR1-213ENST00000479176 FNBP4Q8N3X1 1017 aaPredicted RBP14.98□□□□□ -0.01
FXR1-213ENST00000479176 NGLY1Q96IV0 654 aa14.98□□□□□ -0.01
FXR1-213ENST00000479176 AKAP12Q02952 1782 aa14.98□□□□□ -0.01
FXR1-213ENST00000479176 BRD4O60885 1362 aaPredicted RBP14.97□□□□□ -0.01
FXR1-213ENST00000479176 ATAD2Q6PL18 1390 aa14.97□□□□□ -0.01
FXR1-213ENST00000479176 PHRF1Q9P1Y6 1649 aaKnown RBP14.96□□□□□ -0.01
FXR1-213ENST00000479176 LMOD2Q6P5Q4 547 aa14.96□□□□□ -0.01
FXR1-213ENST00000479176 CABLES1Q8TDN4 633 aa14.96□□□□□ -0.01
FXR1-213ENST00000479176 CABP1Q9NZU7 370 aa14.96□□□□□ -0.01
FXR1-213ENST00000479176 PLCH1Q4KWH8 1693 aa14.96□□□□□ -0.01
FXR1-213ENST00000479176 BCL9LQ86UU0 1499 aa14.95□□□□□ -0.02
FXR1-213ENST00000479176 NWD2Q9ULI1 1742 aa14.95□□□□□ -0.02
FXR1-213ENST00000479176 USP6P35125 1406 aa14.95□□□□□ -0.02
FXR1-213ENST00000479176 TESK2Q96S53 571 aa14.95□□□□□ -0.02
FXR1-213ENST00000479176 SLIT2O94813 1529 aa14.95□□□□□ -0.02
FXR1-213ENST00000479176 ATRNO75882 1429 aa14.94□□□□□ -0.02
FXR1-213ENST00000479176 SSH2Q76I76 1423 aa14.94□□□□□ -0.02
FXR1-213ENST00000479176 ST20-MTHFSA0A0A6YYL1 179 aa14.94□□□□□ -0.02
FXR1-213ENST00000479176 USP47Q96K76 1375 aa14.94□□□□□ -0.02
FXR1-213ENST00000479176 MON2Q7Z3U7 1717 aa14.94□□□□□ -0.02
FXR1-213ENST00000479176 CDK12Q9NYV4 1490 aaPredicted RBP14.94□□□□□ -0.02
FXR1-213ENST00000479176 NRKQ7Z2Y5 1582 aa14.94□□□□□ -0.02
FXR1-213ENST00000479176 PUS7Q96PZ0 661 aaKnown RBP14.93□□□□□ -0.02
FXR1-213ENST00000479176 USP21Q9UK80 565 aa14.93□□□□□ -0.02
FXR1-213ENST00000479176 CPSF1Q10570 1443 aaKnown RBP14.92□□□□□ -0.02
FXR1-213ENST00000479176 CD44P16070 742 aaKnown RBP14.92□□□□□ -0.02
FXR1-213ENST00000479176 RXRBP28702 533 aa14.92□□□□□ -0.02
FXR1-213ENST00000479176 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
FXR1-213ENST00000479176 QTRT2Q9H974 415 aaKnown RBP14.92□□□□□ -0.02
FXR1-213ENST00000479176 COL14A1Q05707 1796 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms