RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 WASLO00401 505 aaPredicted RBP14.21□□□□□ -0.13
CCM2-210ENST00000478169 BAG6P46379 1132 aa14.21□□□□□ -0.13
CCM2-210ENST00000478169 FAM98CQ17RN3 349 aaKnown RBP14.21□□□□□ -0.13
CCM2-210ENST00000478169 RGPD1P0DJD0 1748 aa14.21□□□□□ -0.14
CCM2-210ENST00000478169 RAB3GAP2Q9H2M9 1393 aa14.21□□□□□ -0.14
CCM2-210ENST00000478169 ITSN1Q15811 1721 aa14.2□□□□□ -0.14
CCM2-210ENST00000478169 SPATA31A5Q5VU36 1347 aa14.19□□□□□ -0.14
CCM2-210ENST00000478169 SPATA31A7Q8IWB4 1347 aa14.19□□□□□ -0.14
CCM2-210ENST00000478169 NGDNQ8NEJ9 315 aaKnown RBP14.19□□□□□ -0.14
CCM2-210ENST00000478169 DCAF11Q8TEB1 546 aa14.19□□□□□ -0.14
CCM2-210ENST00000478169 KDM2AQ9Y2K7 1162 aa14.18□□□□□ -0.14
CCM2-210ENST00000478169 PAK3O75914 559 aaPredicted RBP14.17□□□□□ -0.14
CCM2-210ENST00000478169 ARHGEF28Q8N1W1 1705 aaKnown RBP14.17□□□□□ -0.14
CCM2-210ENST00000478169 THSD7AQ9UPZ6 1657 aa14.17□□□□□ -0.14
CCM2-210ENST00000478169 PRDM11Q9NQV5 511 aa14.16□□□□□ -0.14
CCM2-210ENST00000478169 HRCP23327 699 aa14.15□□□□□ -0.14
CCM2-210ENST00000478169 DISP2A7MBM2 1401 aa14.15□□□□□ -0.14
CCM2-210ENST00000478169 PSDA5PKW4 1024 aaPredicted RBP14.14□□□□□ -0.15
CCM2-210ENST00000478169 EN1Q05925 392 aaPredicted RBP14.14□□□□□ -0.15
CCM2-210ENST00000478169 NUDT16Q96DE0 195 aaKnown RBP14.14□□□□□ -0.15
CCM2-210ENST00000478169 TNS1Q9HBL0 1735 aaKnown RBP14.14□□□□□ -0.15
CCM2-210ENST00000478169 ATP7BP35670 1465 aa14.13□□□□□ -0.15
CCM2-210ENST00000478169 PHRF1Q9P1Y6 1649 aaKnown RBP14.13□□□□□ -0.15
CCM2-210ENST00000478169 SPATA31A1Q5TZJ5 1347 aa14.13□□□□□ -0.15
CCM2-210ENST00000478169 KIAA0232Q92628 1395 aa14.12□□□□□ -0.15
CCM2-210ENST00000478169 FAM182BQ5T319 152 aa14.12□□□□□ -0.15
CCM2-210ENST00000478169 FAM196AQ6ZSG2 479 aa14.11□□□□□ -0.15
CCM2-210ENST00000478169 CDK19Q9BWU1 502 aa14.11□□□□□ -0.15
CCM2-210ENST00000478169 TOPAZ1Q8N9V7 1692 aa14.1□□□□□ -0.15
CCM2-210ENST00000478169 POLR3AO14802 1390 aaPredicted RBP14.1□□□□□ -0.15
CCM2-210ENST00000478169 KIAA1210Q9ULL0 1709 aa14.1□□□□□ -0.15
CCM2-210ENST00000478169 STRN4Q9NRL3 753 aa14.1□□□□□ -0.15
CCM2-210ENST00000478169 CCDC61Q9Y6R9 512 aa14.1□□□□□ -0.15
CCM2-210ENST00000478169 PLEKHG3A1L390 1219 aa14.09□□□□□ -0.15
CCM2-210ENST00000478169 CHRNA2Q15822 529 aa14.09□□□□□ -0.15
CCM2-210ENST00000478169 NBPF8Q3BBV2 869 aa14.09□□□□□ -0.15
CCM2-210ENST00000478169 ZC3H6P61129 1189 aaKnown RBP14.08□□□□□ -0.16
CCM2-210ENST00000478169 R3HDM1Q15032 1099 aaKnown RBP14.08□□□□□ -0.16
CCM2-210ENST00000478169 EZH2Q15910 746 aaKnown RBP14.08□□□□□ -0.16
CCM2-210ENST00000478169 BARGINQ6ZT62 677 aa14.08□□□□□ -0.16
CCM2-210ENST00000478169 CAMKK2Q96RR4 588 aa14.08□□□□□ -0.16
CCM2-210ENST00000478169 ACEP12821 1306 aa14.08□□□□□ -0.16
CCM2-210ENST00000478169 PARD3Q8TEW0 1356 aa14.08□□□□□ -0.16
CCM2-210ENST00000478169 TRIM37O94972 964 aa14.07□□□□□ -0.16
CCM2-210ENST00000478169 EVA1CP58658 441 aa14.07□□□□□ -0.16
CCM2-210ENST00000478169 NUTM2GQ5VZR2 741 aa14.07□□□□□ -0.16
CCM2-210ENST00000478169 SSH2Q76I76 1423 aa14.07□□□□□ -0.16
CCM2-210ENST00000478169 ABTB2Q8N961 1025 aa14.06□□□□□ -0.16
CCM2-210ENST00000478169 CPDO75976 1380 aa14.06□□□□□ -0.16
CCM2-210ENST00000478169 NRKQ7Z2Y5 1582 aa14.05□□□□□ -0.16
CCM2-210ENST00000478169 CAMTA1Q9Y6Y1 1673 aa14.05□□□□□ -0.16
CCM2-210ENST00000478169 APBA3O96018 575 aa14.05□□□□□ -0.16
CCM2-210ENST00000478169 PDE3BQ13370 1112 aa14.05□□□□□ -0.16
CCM2-210ENST00000478169 USP35Q9P2H5 1018 aa14.05□□□□□ -0.16
CCM2-210ENST00000478169 LMO7Q8WWI1 1683 aa14.04□□□□□ -0.16
CCM2-210ENST00000478169 TCP11L2Q8N4U5 519 aa14.04□□□□□ -0.16
CCM2-210ENST00000478169 THRAP3Q9Y2W1 955 aaKnown RBP14.04□□□□□ -0.16
CCM2-210ENST00000478169 USP19O94966 1318 aa14.04□□□□□ -0.16
CCM2-210ENST00000478169 RREB1Q92766 1687 aa14.04□□□□□ -0.16
CCM2-210ENST00000478169 LARP1Q6PKG0 1096 aaKnown RBP14.03□□□□□ -0.16
CCM2-210ENST00000478169 NLRP13Q86W25 1043 aa14.03□□□□□ -0.16
CCM2-210ENST00000478169 BRD4O60885 1362 aaPredicted RBP14.03□□□□□ -0.16
CCM2-210ENST00000478169 C11orf95C9JLR9 678 aaPredicted RBP14.02□□□□□ -0.17
CCM2-210ENST00000478169 NUP188Q5SRE5 1749 aa14.01□□□□□ -0.17
CCM2-210ENST00000478169 PARP4Q9UKK3 1724 aaKnown RBP14.01□□□□□ -0.17
CCM2-210ENST00000478169 GCP02774 474 aa14.01□□□□□ -0.17
CCM2-210ENST00000478169 NBPF14Q5TI25 921 aa14.01□□□□□ -0.17
CCM2-210ENST00000478169 PPIP5K1Q6PFW1 1433 aa14□□□□□ -0.17
CCM2-210ENST00000478169 SRPK2P78362 688 aaKnown RBP14□□□□□ -0.17
CCM2-210ENST00000478169 NBPF1Q3BBV0 1214 aa14□□□□□ -0.17
CCM2-210ENST00000478169 CENPJQ9HC77 1338 aaPredicted RBP13.99□□□□□ -0.17
CCM2-210ENST00000478169 SBF2Q86WG5 1849 aa13.99□□□□□ -0.17
CCM2-210ENST00000478169 COL5A2P05997 1499 aaPredicted RBP13.99□□□□□ -0.17
CCM2-210ENST00000478169 CRB1P82279 1406 aa13.98□□□□□ -0.17
CCM2-210ENST00000478169 QRICH2Q9H0J4 1663 aa13.98□□□□□ -0.17
CCM2-210ENST00000478169 CABP2Q9NPB3 220 aa13.97□□□□□ -0.17
CCM2-210ENST00000478169 RGPD3A6NKT7 1758 aaPredicted RBP13.96□□□□□ -0.17
CCM2-210ENST00000478169 RGPD4Q7Z3J3 1758 aa13.96□□□□□ -0.17
CCM2-210ENST00000478169 USP6P35125 1406 aa13.96□□□□□ -0.18
CCM2-210ENST00000478169 AATKQ6ZMQ8 1374 aa13.96□□□□□ -0.18
CCM2-210ENST00000478169 PEAK1Q9H792 1746 aa13.95□□□□□ -0.18
CCM2-210ENST00000478169 NLRP6P59044 892 aa13.95□□□□□ -0.18
CCM2-210ENST00000478169 CABP1Q9NZU7 370 aa13.95□□□□□ -0.18
CCM2-210ENST00000478169 OVOS2A0A0G2JMS6 1433 aa13.95□□□□□ -0.18
CCM2-210ENST00000478169 OVOS2A0A0J9YW53 1432 aa13.95□□□□□ -0.18
CCM2-210ENST00000478169 OVOS2Q6IE36 1432 aa13.95□□□□□ -0.18
CCM2-210ENST00000478169 SLIT3O75094 1523 aa13.95□□□□□ -0.18
CCM2-210ENST00000478169 COL18A1P39060 1754 aa13.94□□□□□ -0.18
CCM2-210ENST00000478169 WNK3Q9BYP7 1800 aa13.93□□□□□ -0.18
CCM2-210ENST00000478169 PLSCR1O15162 318 aa13.93□□□□□ -0.18
CCM2-210ENST00000478169 SPON1Q9HCB6 807 aa13.93□□□□□ -0.18
CCM2-210ENST00000478169 LRRC37A3O60309 1634 aa13.93□□□□□ -0.18
CCM2-210ENST00000478169 PIK3C2AO00443 1686 aa13.92□□□□□ -0.18
CCM2-210ENST00000478169 DDB1Q16531 1140 aa13.92□□□□□ -0.18
CCM2-210ENST00000478169 CDCA7Q9BWT1 371 aaPredicted RBP13.92□□□□□ -0.18
CCM2-210ENST00000478169 EVC2Q86UK5 1308 aa13.91□□□□□ -0.18
CCM2-210ENST00000478169 AKAP12Q02952 1782 aa13.91□□□□□ -0.18
CCM2-210ENST00000478169 RGPD5Q99666 1765 aa13.91□□□□□ -0.18
CCM2-210ENST00000478169 ZBTB7CA1YPR0 619 aa13.91□□□□□ -0.18
CCM2-210ENST00000478169 KCNQ2O43526 872 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms