RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 PLEKHG5O94827 1062 aa14.44□□□□□ -0.1
HDAC6-222ENST00000478095 SPATA31A6Q5VVP1 1343 aa14.43□□□□□ -0.1
HDAC6-222ENST00000478095 SPATA31A3Q5VYP0 1347 aa14.43□□□□□ -0.1
HDAC6-222ENST00000478095 RGPD8O14715 1765 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-222ENST00000478095 PLEKHG3A1L390 1219 aa14.43□□□□□ -0.1
HDAC6-222ENST00000478095 LMOD2Q6P5Q4 547 aa14.43□□□□□ -0.1
HDAC6-222ENST00000478095 DISP3Q9P2K9 1392 aa14.43□□□□□ -0.1
HDAC6-222ENST00000478095 LRP6O75581 1613 aa14.42□□□□□ -0.1
HDAC6-222ENST00000478095 PAK3O75914 559 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-222ENST00000478095 ATAD2Q6PL18 1390 aa14.42□□□□□ -0.1
HDAC6-222ENST00000478095 TNS3Q68CZ2 1445 aa14.41□□□□□ -0.1
HDAC6-222ENST00000478095 HSPA5P11021 654 aaKnown RBP14.41□□□□□ -0.1
HDAC6-222ENST00000478095 SBNO1A3KN83 1393 aa14.41□□□□□ -0.1
HDAC6-222ENST00000478095 POLR3AO14802 1390 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-222ENST00000478095 TOPAZ1Q8N9V7 1692 aa14.41□□□□□ -0.1
HDAC6-222ENST00000478095 EIF4G2P78344 907 aaKnown RBP eCLIP14.4□□□□□ -0.1
HDAC6-222ENST00000478095 TMF1P82094 1093 aa14.4□□□□□ -0.1
HDAC6-222ENST00000478095 MEX3CQ5U5Q3 659 aaKnown RBP14.4□□□□□ -0.1
HDAC6-222ENST00000478095 TMC1Q8TDI8 760 aa14.4□□□□□ -0.1
HDAC6-222ENST00000478095 SHPRHQ149N8 1683 aa14.39□□□□□ -0.11
HDAC6-222ENST00000478095 ADAMTS2O95450 1211 aa14.39□□□□□ -0.11
HDAC6-222ENST00000478095 ITSN1Q15811 1721 aa14.38□□□□□ -0.11
HDAC6-222ENST00000478095 CABLES1Q8TDN4 633 aa14.38□□□□□ -0.11
HDAC6-222ENST00000478095 ARHGEF10O15013 1369 aa14.37□□□□□ -0.11
HDAC6-222ENST00000478095 NUTM2GQ5VZR2 741 aa14.37□□□□□ -0.11
HDAC6-222ENST00000478095 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
HDAC6-222ENST00000478095 USP6P35125 1406 aa14.36□□□□□ -0.11
HDAC6-222ENST00000478095 SLC24A1O60721 1099 aa14.36□□□□□ -0.11
HDAC6-222ENST00000478095 HAP1P54257 671 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-222ENST00000478095 C8orf37Q96NL8 207 aa14.35□□□□□ -0.11
HDAC6-222ENST00000478095 PUS7Q96PZ0 661 aaKnown RBP14.34□□□□□ -0.11
HDAC6-222ENST00000478095 POLR3GLQ9BT43 218 aa14.34□□□□□ -0.11
HDAC6-222ENST00000478095 TRPM3Q9HCF6 1732 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-222ENST00000478095 COL22A1Q8NFW1 1626 aaPredicted RBP14.33□□□□□ -0.11
HDAC6-222ENST00000478095 ABTB2Q8N961 1025 aa14.33□□□□□ -0.12
HDAC6-222ENST00000478095 RGS17Q9UGC6 210 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-222ENST00000478095 KTN1Q86UP2 1357 aaKnown RBP14.33□□□□□ -0.12
HDAC6-222ENST00000478095 CPSF1Q10570 1443 aaKnown RBP14.32□□□□□ -0.12
HDAC6-222ENST00000478095 CD163L1Q9NR16 1453 aa14.32□□□□□ -0.12
HDAC6-222ENST00000478095 CDCA8Q53HL2 280 aa14.32□□□□□ -0.12
HDAC6-222ENST00000478095 HDGFL2Q7Z4V5 671 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-222ENST00000478095 ZNF692Q9BU19 519 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-222ENST00000478095 A0A1W2PP64 1363 aa14.32□□□□□ -0.12
HDAC6-222ENST00000478095 NGLY1Q96IV0 654 aa14.31□□□□□ -0.12
HDAC6-222ENST00000478095 TERF2IPQ9NYB0 399 aa14.31□□□□□ -0.12
HDAC6-222ENST00000478095 AFF2P51816 1311 aa14.31□□□□□ -0.12
HDAC6-222ENST00000478095 TTC21BQ7Z4L5 1316 aa14.31□□□□□ -0.12
HDAC6-222ENST00000478095 SSH2Q76I76 1423 aa14.31□□□□□ -0.12
HDAC6-222ENST00000478095 ALS2Q96Q42 1657 aa14.3□□□□□ -0.12
HDAC6-222ENST00000478095 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.3□□□□□ -0.12
HDAC6-222ENST00000478095 NINLQ9Y2I6 1382 aa14.3□□□□□ -0.12
HDAC6-222ENST00000478095 NLRP6P59044 892 aa14.29□□□□□ -0.12
HDAC6-222ENST00000478095 BRD4O60885 1362 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-222ENST00000478095 C11orf95C9JLR9 678 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-222ENST00000478095 POTEAQ6S8J7 498 aa14.28□□□□□ -0.12
HDAC6-222ENST00000478095 ZBTB12Q9Y330 459 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-222ENST00000478095 ANKRD36BQ8N2N9 1353 aa14.27□□□□□ -0.12
HDAC6-222ENST00000478095 TTC21AQ8NDW8 1320 aa14.27□□□□□ -0.12
HDAC6-222ENST00000478095 NLRP13Q86W25 1043 aa14.27□□□□□ -0.13
HDAC6-222ENST00000478095 NME9Q86XW9 330 aa14.27□□□□□ -0.13
HDAC6-222ENST00000478095 ZRANB1Q9UGI0 708 aa14.27□□□□□ -0.13
HDAC6-222ENST00000478095 EDC4Q6P2E9 1401 aaKnown RBP14.26□□□□□ -0.13
HDAC6-222ENST00000478095 USP19O94966 1318 aa14.26□□□□□ -0.13
HDAC6-222ENST00000478095 ZNF772Q68DY9 489 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-222ENST00000478095 ILDR2Q71H61 639 aa14.26□□□□□ -0.13
HDAC6-222ENST00000478095 FAM83GA6ND36 823 aa14.25□□□□□ -0.13
HDAC6-222ENST00000478095 SOX12O15370 315 aa14.25□□□□□ -0.13
HDAC6-222ENST00000478095 ZC3H6P61129 1189 aaKnown RBP14.25□□□□□ -0.13
HDAC6-222ENST00000478095 USP21Q9UK80 565 aa14.25□□□□□ -0.13
HDAC6-222ENST00000478095 NRKQ7Z2Y5 1582 aa14.25□□□□□ -0.13
HDAC6-222ENST00000478095 KIAA0232Q92628 1395 aa14.24□□□□□ -0.13
HDAC6-222ENST00000478095 GCP02774 474 aa14.24□□□□□ -0.13
HDAC6-222ENST00000478095 FNBP4Q8N3X1 1017 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-222ENST00000478095 PRDM11Q9NQV5 511 aa14.24□□□□□ -0.13
HDAC6-222ENST00000478095 AKAP12Q02952 1782 aa14.24□□□□□ -0.13
HDAC6-222ENST00000478095 ABCA3Q99758 1704 aa14.24□□□□□ -0.13
HDAC6-222ENST00000478095 PIK3C2AO00443 1686 aa14.23□□□□□ -0.13
HDAC6-222ENST00000478095 KIF7Q2M1P5 1343 aa14.23□□□□□ -0.13
HDAC6-222ENST00000478095 ZBTB7CA1YPR0 619 aa14.23□□□□□ -0.13
HDAC6-222ENST00000478095 CHRNA2Q15822 529 aa14.23□□□□□ -0.13
HDAC6-222ENST00000478095 MON2Q7Z3U7 1717 aa14.22□□□□□ -0.13
HDAC6-222ENST00000478095 CARD14Q9BXL6 1004 aa14.22□□□□□ -0.13
HDAC6-222ENST00000478095 BCL9LQ86UU0 1499 aa14.21□□□□□ -0.13
HDAC6-222ENST00000478095 QTRT2Q9H974 415 aaKnown RBP14.21□□□□□ -0.13
HDAC6-222ENST00000478095 PHRF1Q9P1Y6 1649 aaKnown RBP14.21□□□□□ -0.13
HDAC6-222ENST00000478095 NSD3Q9BZ95 1437 aa14.21□□□□□ -0.13
HDAC6-222ENST00000478095 CRYBG1Q9Y4K1 1723 aa14.21□□□□□ -0.14
HDAC6-222ENST00000478095 USP31Q70CQ4 1352 aa14.21□□□□□ -0.14
HDAC6-222ENST00000478095 SLIT2O94813 1529 aa14.2□□□□□ -0.14
HDAC6-222ENST00000478095 MYOM1P52179 1685 aa14.2□□□□□ -0.14
HDAC6-222ENST00000478095 UNC5CLQ8IV45 518 aa14.2□□□□□ -0.14
HDAC6-222ENST00000478095 GGNBP2Q9H3C7 697 aa14.2□□□□□ -0.14
HDAC6-222ENST00000478095 BTG4Q9NY30 223 aa14.2□□□□□ -0.14
HDAC6-222ENST00000478095 SLIT3O75094 1523 aa14.2□□□□□ -0.14
HDAC6-222ENST00000478095 PANK3Q9H999 370 aa14.19□□□□□ -0.14
HDAC6-222ENST00000478095 TRPC5Q9UL62 973 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-222ENST00000478095 CPDO75976 1380 aa14.19□□□□□ -0.14
HDAC6-222ENST00000478095 WASHC2AQ641Q2 1341 aa14.18□□□□□ -0.14
HDAC6-222ENST00000478095 OVOS2A0A0J9YW53 1432 aa14.18□□□□□ -0.14
HDAC6-222ENST00000478095 ATRNO75882 1429 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms