RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 IGHDP01880 384 aa26.69■■□□□ 1.86
TMED4-204ENST00000477639 FAM161AQ3B820 660 aa26.69■■□□□ 1.86
TMED4-204ENST00000477639 CANXP27824 592 aaKnown RBP26.68■■□□□ 1.86
TMED4-204ENST00000477639 CDK19Q9BWU1 502 aa26.68■■□□□ 1.86
TMED4-204ENST00000477639 C8orf34Q49A92 452 aa26.67■■□□□ 1.86
TMED4-204ENST00000477639 PLEKHF1Q96S99 279 aa26.67■■□□□ 1.86
TMED4-204ENST00000477639 STAG3Q9UJ98 1225 aa26.67■■□□□ 1.86
TMED4-204ENST00000477639 CLUAP1Q96AJ1 413 aa26.67■■□□□ 1.86
TMED4-204ENST00000477639 MYH16Q9H6N6 1097 aa26.67■■□□□ 1.86
TMED4-204ENST00000477639 COG6Q9Y2V7 657 aa26.67■■□□□ 1.86
TMED4-204ENST00000477639 NCKAP5LQ9HCH0 1330 aa26.66■■□□□ 1.86
TMED4-204ENST00000477639 NBR1Q14596 966 aa26.66■■□□□ 1.86
TMED4-204ENST00000477639 DLC1Q96QB1 1528 aa26.65■■□□□ 1.86
TMED4-204ENST00000477639 HDGFL2Q7Z4V5 671 aaPredicted RBP26.64■■□□□ 1.86
TMED4-204ENST00000477639 FRAT1Q92837 279 aaPredicted RBP26.64■■□□□ 1.86
TMED4-204ENST00000477639 THEMISQ8N1K5 641 aaPredicted RBP26.63■■□□□ 1.85
TMED4-204ENST00000477639 AAMPQ13685 434 aa26.62■■□□□ 1.85
TMED4-204ENST00000477639 DDRGK1Q96HY6 314 aa26.62■■□□□ 1.85
TMED4-204ENST00000477639 RGS3P49796 1198 aa26.62■■□□□ 1.85
TMED4-204ENST00000477639 CABP1Q9NZU7 370 aa26.62■■□□□ 1.85
TMED4-204ENST00000477639 RIMS2Q9UQ26 1411 aa26.62■■□□□ 1.85
TMED4-204ENST00000477639 PNPLA6Q8IY17 1366 aa26.6■■□□□ 1.85
TMED4-204ENST00000477639 SETD1AO15047 1707 aaKnown RBP26.6■■□□□ 1.85
TMED4-204ENST00000477639 U2SURPO15042 1029 aaKnown RBP26.6■■□□□ 1.85
TMED4-204ENST00000477639 TMPOP42166 694 aaKnown RBP26.6■■□□□ 1.85
TMED4-204ENST00000477639 UBR1Q8IWV7 1749 aa26.59■■□□□ 1.85
TMED4-204ENST00000477639 RLBP1P12271 317 aa26.59■■□□□ 1.85
TMED4-204ENST00000477639 TRIM35Q9UPQ4 493 aa26.58■■□□□ 1.85
TMED4-204ENST00000477639 TNNQ9UQP3 1299 aa26.58■■□□□ 1.85
TMED4-204ENST00000477639 KIF20BQ96Q89 1820 aa26.57■■□□□ 1.84
TMED4-204ENST00000477639 CT47B1P0C2W7 299 aaPredicted RBP26.57■■□□□ 1.84
TMED4-204ENST00000477639 WAPLQ7Z5K2 1190 aa26.57■■□□□ 1.84
TMED4-204ENST00000477639 BCL2L13Q9BXK5 485 aa26.56■■□□□ 1.84
TMED4-204ENST00000477639 DIAPH1O60610 1272 aaKnown RBP26.55■■□□□ 1.84
TMED4-204ENST00000477639 ATP7BP35670 1465 aa26.54■■□□□ 1.84
TMED4-204ENST00000477639 ANKLE2Q86XL3 938 aa26.54■■□□□ 1.84
TMED4-204ENST00000477639 IL16Q14005 1332 aa26.53■■□□□ 1.84
TMED4-204ENST00000477639 MAPK8IP3Q9UPT6 1336 aa26.53■■□□□ 1.84
TMED4-204ENST00000477639 PMFBP1Q8TBY8 1022 aa26.53■■□□□ 1.84
TMED4-204ENST00000477639 DEKP35659 375 aaKnown RBP26.52■■□□□ 1.84
TMED4-204ENST00000477639 TSR2Q969E8 191 aaKnown RBP26.52■■□□□ 1.84
TMED4-204ENST00000477639 PCDHB15Q9Y5E8 787 aa26.52■■□□□ 1.84
TMED4-204ENST00000477639 CDC42BPGQ6DT37 1551 aa26.51■■□□□ 1.83
TMED4-204ENST00000477639 NRXN3Q9Y4C0 1643 aa26.51■■□□□ 1.83
TMED4-204ENST00000477639 EXOSC9Q06265 439 aaKnown RBP26.49■■□□□ 1.83
TMED4-204ENST00000477639 PNNQ9H307 717 aaKnown RBP26.49■■□□□ 1.83
TMED4-204ENST00000477639 ZKSCAN2Q63HK3 967 aa26.48■■□□□ 1.83
TMED4-204ENST00000477639 RIPK4P57078 832 aa26.47■■□□□ 1.83
TMED4-204ENST00000477639 MVPQ14764 893 aaKnown RBP26.47■■□□□ 1.83
TMED4-204ENST00000477639 RTL5Q5HYW3 569 aaPredicted RBP26.47■■□□□ 1.83
TMED4-204ENST00000477639 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.47■■□□□ 1.83
TMED4-204ENST00000477639 POLKQ9UBT6 870 aa26.47■■□□□ 1.83
TMED4-204ENST00000477639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.46■■□□□ 1.83
TMED4-204ENST00000477639 LAS1LQ9Y4W2 734 aaKnown RBP26.46■■□□□ 1.83
TMED4-204ENST00000477639 FCHSD2O94868 740 aa26.46■■□□□ 1.83
TMED4-204ENST00000477639 CPSF1Q10570 1443 aaKnown RBP26.45■■□□□ 1.83
TMED4-204ENST00000477639 METP08581 1390 aa26.45■■□□□ 1.83
TMED4-204ENST00000477639 VIRMAQ69YN4 1812 aaKnown RBP26.44■■□□□ 1.82
TMED4-204ENST00000477639 WASLO00401 505 aaPredicted RBP26.44■■□□□ 1.82
TMED4-204ENST00000477639 PPM1GO15355 546 aaPredicted RBP26.44■■□□□ 1.82
TMED4-204ENST00000477639 TXNDC2Q86VQ3 553 aa26.44■■□□□ 1.82
TMED4-204ENST00000477639 DZIP1LQ8IYY4 767 aaKnown RBP26.44■■□□□ 1.82
TMED4-204ENST00000477639 LTKP29376 864 aa26.44■■□□□ 1.82
TMED4-204ENST00000477639 TMEM2Q9UHN6 1383 aa26.44■■□□□ 1.82
TMED4-204ENST00000477639 SLIT1O75093 1534 aa26.43■■□□□ 1.82
TMED4-204ENST00000477639 NPHP4O75161 1426 aaPredicted RBP26.43■■□□□ 1.82
TMED4-204ENST00000477639 SSH1Q8WYL5 1049 aa26.42■■□□□ 1.82
TMED4-204ENST00000477639 SMC4Q9NTJ3 1288 aa26.42■■□□□ 1.82
TMED4-204ENST00000477639 EID1Q9Y6B2 187 aa26.42■■□□□ 1.82
TMED4-204ENST00000477639 ARHGAP23Q9P227 1491 aa26.42■■□□□ 1.82
TMED4-204ENST00000477639 LRRC7Q96NW7 1537 aa26.42■■□□□ 1.82
TMED4-204ENST00000477639 SIRT1Q96EB6 747 aa26.42■■□□□ 1.82
TMED4-204ENST00000477639 RSPH6AQ9H0K4 717 aa26.42■■□□□ 1.82
TMED4-204ENST00000477639 RWDD1Q9H446 243 aaPredicted RBP26.42■■□□□ 1.82
TMED4-204ENST00000477639 EDC4Q6P2E9 1401 aaKnown RBP26.41■■□□□ 1.82
TMED4-204ENST00000477639 FBLN1P23142 703 aa26.41■■□□□ 1.82
TMED4-204ENST00000477639 FAM135BQ49AJ0 1406 aa26.41■■□□□ 1.82
TMED4-204ENST00000477639 PPIP5K1Q6PFW1 1433 aa26.4■■□□□ 1.82
TMED4-204ENST00000477639 USP35Q9P2H5 1018 aa26.4■■□□□ 1.82
TMED4-204ENST00000477639 FTSJ3Q8IY81 847 aaKnown RBP26.39■■□□□ 1.82
TMED4-204ENST00000477639 PDZRN3Q9UPQ7 1066 aa26.39■■□□□ 1.82
TMED4-204ENST00000477639 USP19O94966 1318 aa26.39■■□□□ 1.81
TMED4-204ENST00000477639 ZNF335Q9H4Z2 1342 aaPredicted RBP26.39■■□□□ 1.81
TMED4-204ENST00000477639 KNDC1Q76NI1 1749 aa26.38■■□□□ 1.81
TMED4-204ENST00000477639 TECPR2O15040 1411 aa26.38■■□□□ 1.81
TMED4-204ENST00000477639 TRIM27P14373 513 aa26.38■■□□□ 1.81
TMED4-204ENST00000477639 SLC4A3P48751 1232 aa26.38■■□□□ 1.81
TMED4-204ENST00000477639 PRKAR2BP31323 418 aa26.37■■□□□ 1.81
TMED4-204ENST00000477639 NEFMP07197 916 aa26.37■■□□□ 1.81
TMED4-204ENST00000477639 ATF7IPQ6VMQ6 1270 aa26.36■■□□□ 1.81
TMED4-204ENST00000477639 NUDT16Q96DE0 195 aaKnown RBP26.36■■□□□ 1.81
TMED4-204ENST00000477639 MAP2P11137 1827 aaKnown RBP26.35■■□□□ 1.81
TMED4-204ENST00000477639 HDGFP51858 240 aaKnown RBP26.35■■□□□ 1.81
TMED4-204ENST00000477639 NME9Q86XW9 330 aa26.35■■□□□ 1.81
TMED4-204ENST00000477639 NOB1Q9ULX3 412 aaKnown RBP26.35■■□□□ 1.81
TMED4-204ENST00000477639 AATKQ6ZMQ8 1374 aa26.34■■□□□ 1.81
TMED4-204ENST00000477639 SEC24BO95487 1268 aa26.33■■□□□ 1.81
TMED4-204ENST00000477639 IL13P35225 146 aa26.33■■□□□ 1.81
TMED4-204ENST00000477639 CERKQ8TCT0 537 aa26.33■■□□□ 1.81
TMED4-204ENST00000477639 DAXXQ9UER7 740 aaPredicted RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms