RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 KIF1AQ12756 1690 aa12.77□□□□□ -0.37
PGK1-204ENST00000477335 HDGFL2Q7Z4V5 671 aaPredicted RBP12.76□□□□□ -0.37
PGK1-204ENST00000477335 TERF2IPQ9NYB0 399 aa12.76□□□□□ -0.37
PGK1-204ENST00000477335 EDC4Q6P2E9 1401 aaKnown RBP12.76□□□□□ -0.37
PGK1-204ENST00000477335 XPCQ01831 940 aaPredicted RBP12.75□□□□□ -0.37
PGK1-204ENST00000477335 CNGB1Q14028 1251 aaPredicted RBP12.75□□□□□ -0.37
PGK1-204ENST00000477335 NGDNQ8NEJ9 315 aaKnown RBP12.75□□□□□ -0.37
PGK1-204ENST00000477335 CERKQ8TCT0 537 aa12.75□□□□□ -0.37
PGK1-204ENST00000477335 ZRANB1Q9UGI0 708 aa12.75□□□□□ -0.37
PGK1-204ENST00000477335 TTC21BQ7Z4L5 1316 aa12.74□□□□□ -0.37
PGK1-204ENST00000477335 FOXO3O43524 673 aa12.74□□□□□ -0.37
PGK1-204ENST00000477335 CC2D1BQ5T0F9 858 aaKnown RBP12.74□□□□□ -0.37
PGK1-204ENST00000477335 MIER1Q8N108 512 aa12.74□□□□□ -0.37
PGK1-204ENST00000477335 KNSTRNQ9Y448 316 aa12.74□□□□□ -0.37
PGK1-204ENST00000477335 TRPM3Q9HCF6 1732 aaPredicted RBP12.74□□□□□ -0.37
PGK1-204ENST00000477335 IQSEC2Q5JU85 1478 aa12.73□□□□□ -0.37
PGK1-204ENST00000477335 PXDNQ92626 1479 aa12.73□□□□□ -0.37
PGK1-204ENST00000477335 NPC1L1Q9UHC9 1359 aa12.73□□□□□ -0.37
PGK1-204ENST00000477335 NME9Q86XW9 330 aa12.73□□□□□ -0.37
PGK1-204ENST00000477335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.73□□□□□ -0.37
PGK1-204ENST00000477335 PARD3Q8TEW0 1356 aa12.72□□□□□ -0.37
PGK1-204ENST00000477335 FYB1O15117 783 aa12.72□□□□□ -0.37
PGK1-204ENST00000477335 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
PGK1-204ENST00000477335 PRKRIP1Q9H875 184 aaPredicted RBP12.72□□□□□ -0.37
PGK1-204ENST00000477335 PIK3C2AO00443 1686 aa12.72□□□□□ -0.37
PGK1-204ENST00000477335 ROBO1Q9Y6N7 1651 aa12.72□□□□□ -0.37
PGK1-204ENST00000477335 KIF20BQ96Q89 1820 aa12.72□□□□□ -0.37
PGK1-204ENST00000477335 MARF1Q9Y4F3 1742 aaKnown RBP12.71□□□□□ -0.37
PGK1-204ENST00000477335 NHSL1Q5SYE7 1610 aa12.71□□□□□ -0.37
PGK1-204ENST00000477335 GGNBP2Q9H3C7 697 aa12.71□□□□□ -0.37
PGK1-204ENST00000477335 CGNL1Q0VF96 1302 aa12.7□□□□□ -0.38
PGK1-204ENST00000477335 KRT28Q7Z3Y7 464 aa12.7□□□□□ -0.38
PGK1-204ENST00000477335 OVOS2A0A0J9YW53 1432 aa12.7□□□□□ -0.38
PGK1-204ENST00000477335 OVOS2Q6IE36 1432 aa12.7□□□□□ -0.38
PGK1-204ENST00000477335 ANKRD26Q9UPS8 1709 aa12.69□□□□□ -0.38
PGK1-204ENST00000477335 PSME1Q06323 249 aa12.69□□□□□ -0.38
PGK1-204ENST00000477335 ALS2Q96Q42 1657 aa12.68□□□□□ -0.38
PGK1-204ENST00000477335 UBAP1LF5GYI3 381 aa12.68□□□□□ -0.38
PGK1-204ENST00000477335 ANP32CO43423 234 aa12.68□□□□□ -0.38
PGK1-204ENST00000477335 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
PGK1-204ENST00000477335 CCDC184Q52MB2 194 aa12.68□□□□□ -0.38
PGK1-204ENST00000477335 AHDC1Q5TGY3 1603 aaPredicted RBP12.68□□□□□ -0.38
PGK1-204ENST00000477335 NSD2O96028 1365 aa12.68□□□□□ -0.38
PGK1-204ENST00000477335 USP54Q70EL1 1684 aa12.67□□□□□ -0.38
PGK1-204ENST00000477335 SOS2Q07890 1332 aaPredicted RBP12.67□□□□□ -0.38
PGK1-204ENST00000477335 NPHP3Q7Z494 1330 aa12.67□□□□□ -0.38
PGK1-204ENST00000477335 TTC21AQ8NDW8 1320 aa12.67□□□□□ -0.38
PGK1-204ENST00000477335 FBLN1P23142 703 aa12.67□□□□□ -0.38
PGK1-204ENST00000477335 PIP4K2BP78356 416 aa12.67□□□□□ -0.38
PGK1-204ENST00000477335 NUTM2GQ5VZR2 741 aa12.67□□□□□ -0.38
PGK1-204ENST00000477335 SBNO1A3KN83 1393 aa12.67□□□□□ -0.38
PGK1-204ENST00000477335 BRD4O60885 1362 aaPredicted RBP12.67□□□□□ -0.38
PGK1-204ENST00000477335 USP31Q70CQ4 1352 aa12.67□□□□□ -0.38
PGK1-204ENST00000477335 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
PGK1-204ENST00000477335 TNS3Q68CZ2 1445 aa12.65□□□□□ -0.38
PGK1-204ENST00000477335 TOM1O60784 492 aa12.65□□□□□ -0.38
PGK1-204ENST00000477335 RALBP1Q15311 655 aa12.65□□□□□ -0.38
PGK1-204ENST00000477335 MORC1Q86VD1 984 aa12.65□□□□□ -0.38
PGK1-204ENST00000477335 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
PGK1-204ENST00000477335 SPATA31A3Q5VYP0 1347 aa12.64□□□□□ -0.39
PGK1-204ENST00000477335 COL16A1Q07092 1604 aaPredicted RBP12.64□□□□□ -0.39
PGK1-204ENST00000477335 PPP2R1AP30153 589 aa12.64□□□□□ -0.39
PGK1-204ENST00000477335 TNNT2P45379 298 aaPredicted RBP12.64□□□□□ -0.39
PGK1-204ENST00000477335 SLIT3O75094 1523 aa12.63□□□□□ -0.39
PGK1-204ENST00000477335 ABTB2Q8N961 1025 aa12.63□□□□□ -0.39
PGK1-204ENST00000477335 USP19O94966 1318 aa12.62□□□□□ -0.39
PGK1-204ENST00000477335 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
PGK1-204ENST00000477335 CRYBG1Q9Y4K1 1723 aa12.62□□□□□ -0.39
PGK1-204ENST00000477335 NLRP6P59044 892 aa12.62□□□□□ -0.39
PGK1-204ENST00000477335 C1QBPQ07021 282 aaKnown RBP12.62□□□□□ -0.39
PGK1-204ENST00000477335 COG3Q96JB2 828 aa12.62□□□□□ -0.39
PGK1-204ENST00000477335 NFAT5O94916 1531 aa12.62□□□□□ -0.39
PGK1-204ENST00000477335 PHLPP1O60346 1717 aa12.61□□□□□ -0.39
PGK1-204ENST00000477335 PEAK1Q9H792 1746 aa12.6□□□□□ -0.39
PGK1-204ENST00000477335 PHRF1Q9P1Y6 1649 aaKnown RBP12.6□□□□□ -0.39
PGK1-204ENST00000477335 SOX12O15370 315 aa12.6□□□□□ -0.39
PGK1-204ENST00000477335 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
PGK1-204ENST00000477335 LMOD2Q6P5Q4 547 aa12.6□□□□□ -0.39
PGK1-204ENST00000477335 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
PGK1-204ENST00000477335 SMG6Q86US8 1419 aaKnown RBP12.6□□□□□ -0.39
PGK1-204ENST00000477335 AATKQ6ZMQ8 1374 aa12.59□□□□□ -0.39
PGK1-204ENST00000477335 RRS1Q15050 365 aaKnown RBP12.59□□□□□ -0.39
PGK1-204ENST00000477335 POLKQ9UBT6 870 aa12.59□□□□□ -0.39
PGK1-204ENST00000477335 EMILIN1Q9Y6C2 1016 aa12.59□□□□□ -0.39
PGK1-204ENST00000477335 ABCA3Q99758 1704 aa12.59□□□□□ -0.39
PGK1-204ENST00000477335 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
PGK1-204ENST00000477335 ARHGEF10O15013 1369 aa12.58□□□□□ -0.4
PGK1-204ENST00000477335 PNPLA6Q8IY17 1366 aa12.58□□□□□ -0.4
PGK1-204ENST00000477335 CCER2I3L3R5 266 aa12.58□□□□□ -0.4
PGK1-204ENST00000477335 NLRP13Q86W25 1043 aa12.58□□□□□ -0.4
PGK1-204ENST00000477335 MTHFSP49914 203 aa12.57□□□□□ -0.4
PGK1-204ENST00000477335 MAP3K19Q56UN5 1328 aa12.57□□□□□ -0.4
PGK1-204ENST00000477335 COL22A1Q8NFW1 1626 aaPredicted RBP12.56□□□□□ -0.4
PGK1-204ENST00000477335 GCP02774 474 aa12.56□□□□□ -0.4
PGK1-204ENST00000477335 CACNB1Q02641 598 aaPredicted RBP12.56□□□□□ -0.4
PGK1-204ENST00000477335 SPINK5Q9NQ38 1064 aaPredicted RBP12.56□□□□□ -0.4
PGK1-204ENST00000477335 HSPA1LP34931 641 aa12.55□□□□□ -0.4
PGK1-204ENST00000477335 MRS2Q9HD23 443 aa12.55□□□□□ -0.4
PGK1-204ENST00000477335 MAP2P11137 1827 aaKnown RBP12.55□□□□□ -0.4
PGK1-204ENST00000477335 CDK12Q9NYV4 1490 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms