RNA–Protein interactions for RNA: ENST00000476905.6

SSX2IP-206, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2

Gene SSX2IP, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-206ENST00000476905 POLR3AO14802 1390 aaPredicted RBP12.79□□□□□ -0.36
SSX2IP-206ENST00000476905 EIF3AQ14152 1382 aaKnown RBP12.79□□□□□ -0.36
SSX2IP-206ENST00000476905 NGDNQ8NEJ9 315 aaKnown RBP12.79□□□□□ -0.36
SSX2IP-206ENST00000476905 TNS3Q68CZ2 1445 aa12.78□□□□□ -0.36
SSX2IP-206ENST00000476905 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
SSX2IP-206ENST00000476905 COL22A1Q8NFW1 1626 aaPredicted RBP12.77□□□□□ -0.36
SSX2IP-206ENST00000476905 SBNO2Q9Y2G9 1366 aa12.77□□□□□ -0.36
SSX2IP-206ENST00000476905 C8orf37Q96NL8 207 aa12.77□□□□□ -0.36
SSX2IP-206ENST00000476905 EVC2Q86UK5 1308 aa12.77□□□□□ -0.37
SSX2IP-206ENST00000476905 TOPAZ1Q8N9V7 1692 aa12.77□□□□□ -0.37
SSX2IP-206ENST00000476905 PPIP5K1Q6PFW1 1433 aa12.77□□□□□ -0.37
SSX2IP-206ENST00000476905 TRPM3Q9HCF6 1732 aaPredicted RBP12.77□□□□□ -0.37
SSX2IP-206ENST00000476905 MEX3CQ5U5Q3 659 aaKnown RBP12.76□□□□□ -0.37
SSX2IP-206ENST00000476905 AFF2P51816 1311 aa12.76□□□□□ -0.37
SSX2IP-206ENST00000476905 LMOD2Q6P5Q4 547 aa12.76□□□□□ -0.37
SSX2IP-206ENST00000476905 HOXD11P31277 338 aaPredicted RBP12.74□□□□□ -0.37
SSX2IP-206ENST00000476905 NUTM2GQ5VZR2 741 aa12.74□□□□□ -0.37
SSX2IP-206ENST00000476905 FNBP4Q8N3X1 1017 aaPredicted RBP12.74□□□□□ -0.37
SSX2IP-206ENST00000476905 USP47Q96K76 1375 aa12.74□□□□□ -0.37
SSX2IP-206ENST00000476905 SSH2Q76I76 1423 aa12.74□□□□□ -0.37
SSX2IP-206ENST00000476905 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
SSX2IP-206ENST00000476905 NGLY1Q96IV0 654 aa12.73□□□□□ -0.37
SSX2IP-206ENST00000476905 ALS2Q96Q42 1657 aa12.73□□□□□ -0.37
SSX2IP-206ENST00000476905 SLC12A5Q9H2X9 1139 aa12.73□□□□□ -0.37
SSX2IP-206ENST00000476905 BCL9LQ86UU0 1499 aa12.72□□□□□ -0.37
SSX2IP-206ENST00000476905 CD163L1Q9NR16 1453 aa12.72□□□□□ -0.37
SSX2IP-206ENST00000476905 ARHGEF10O15013 1369 aa12.72□□□□□ -0.37
SSX2IP-206ENST00000476905 FAM83GA6ND36 823 aa12.72□□□□□ -0.37
SSX2IP-206ENST00000476905 CPSF1Q10570 1443 aaKnown RBP12.71□□□□□ -0.37
SSX2IP-206ENST00000476905 USP6P35125 1406 aa12.71□□□□□ -0.38
SSX2IP-206ENST00000476905 ITSN1Q15811 1721 aa12.7□□□□□ -0.38
SSX2IP-206ENST00000476905 TPRNQ4KMQ1 711 aa12.7□□□□□ -0.38
SSX2IP-206ENST00000476905 ZNF772Q68DY9 489 aaPredicted RBP12.7□□□□□ -0.38
SSX2IP-206ENST00000476905 QTRT2Q9H974 415 aaKnown RBP12.7□□□□□ -0.38
SSX2IP-206ENST00000476905 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
SSX2IP-206ENST00000476905 SLIT2O94813 1529 aa12.69□□□□□ -0.38
SSX2IP-206ENST00000476905 USP21Q9UK80 565 aa12.69□□□□□ -0.38
SSX2IP-206ENST00000476905 SOCS7O14512 581 aa12.68□□□□□ -0.38
SSX2IP-206ENST00000476905 ABTB2Q8N961 1025 aa12.68□□□□□ -0.38
SSX2IP-206ENST00000476905 ZRANB1Q9UGI0 708 aa12.68□□□□□ -0.38
SSX2IP-206ENST00000476905 TTC21BQ7Z4L5 1316 aa12.68□□□□□ -0.38
SSX2IP-206ENST00000476905 PUS7Q96PZ0 661 aaKnown RBP12.68□□□□□ -0.38
SSX2IP-206ENST00000476905 USP19O94966 1318 aa12.67□□□□□ -0.38
SSX2IP-206ENST00000476905 ABCA3Q99758 1704 aa12.67□□□□□ -0.38
SSX2IP-206ENST00000476905 CRYBG1Q9Y4K1 1723 aa12.67□□□□□ -0.38
SSX2IP-206ENST00000476905 TMC1Q8TDI8 760 aa12.67□□□□□ -0.38
SSX2IP-206ENST00000476905 HSPA5P11021 654 aaKnown RBP12.66□□□□□ -0.38
SSX2IP-206ENST00000476905 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
SSX2IP-206ENST00000476905 ATRNO75882 1429 aa12.66□□□□□ -0.38
SSX2IP-206ENST00000476905 C11orf95C9JLR9 678 aaPredicted RBP12.65□□□□□ -0.38
SSX2IP-206ENST00000476905 RXRBP28702 533 aa12.65□□□□□ -0.38
SSX2IP-206ENST00000476905 ZC3H6P61129 1189 aaKnown RBP12.65□□□□□ -0.38
SSX2IP-206ENST00000476905 CHRNA2Q15822 529 aa12.65□□□□□ -0.38
SSX2IP-206ENST00000476905 UNC5CLQ8IV45 518 aa12.65□□□□□ -0.38
SSX2IP-206ENST00000476905 A0A1W2PP64 1363 aa12.64□□□□□ -0.39
SSX2IP-206ENST00000476905 KTN1Q86UP2 1357 aaKnown RBP12.64□□□□□ -0.39
SSX2IP-206ENST00000476905 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
SSX2IP-206ENST00000476905 GCP02774 474 aa12.64□□□□□ -0.39
SSX2IP-206ENST00000476905 NLRP6P59044 892 aa12.64□□□□□ -0.39
SSX2IP-206ENST00000476905 MARF1Q9Y4F3 1742 aaKnown RBP12.63□□□□□ -0.39
SSX2IP-206ENST00000476905 BRD4O60885 1362 aaPredicted RBP12.63□□□□□ -0.39
SSX2IP-206ENST00000476905 RBM6P78332 1123 aaKnown RBP12.63□□□□□ -0.39
SSX2IP-206ENST00000476905 TMF1P82094 1093 aa12.63□□□□□ -0.39
SSX2IP-206ENST00000476905 NME9Q86XW9 330 aa12.63□□□□□ -0.39
SSX2IP-206ENST00000476905 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.63□□□□□ -0.39
SSX2IP-206ENST00000476905 TRPC5Q9UL62 973 aaPredicted RBP12.63□□□□□ -0.39
SSX2IP-206ENST00000476905 NLRP13Q86W25 1043 aa12.63□□□□□ -0.39
SSX2IP-206ENST00000476905 BTG4Q9NY30 223 aa12.63□□□□□ -0.39
SSX2IP-206ENST00000476905 PIK3C2AO00443 1686 aa12.62□□□□□ -0.39
SSX2IP-206ENST00000476905 GJD4Q96KN9 370 aaPredicted RBP12.62□□□□□ -0.39
SSX2IP-206ENST00000476905 AKAP12Q02952 1782 aa12.62□□□□□ -0.39
SSX2IP-206ENST00000476905 RGS12O14924 1447 aa12.62□□□□□ -0.39
SSX2IP-206ENST00000476905 NRKQ7Z2Y5 1582 aa12.61□□□□□ -0.39
SSX2IP-206ENST00000476905 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSX2IP-206ENST00000476905 CARD14Q9BXL6 1004 aa12.61□□□□□ -0.39
SSX2IP-206ENST00000476905 PRDM11Q9NQV5 511 aa12.61□□□□□ -0.39
SSX2IP-206ENST00000476905 PHRF1Q9P1Y6 1649 aaKnown RBP12.6□□□□□ -0.39
SSX2IP-206ENST00000476905 VPS72Q15906 364 aa12.6□□□□□ -0.39
SSX2IP-206ENST00000476905 TTC21AQ8NDW8 1320 aa12.6□□□□□ -0.39
SSX2IP-206ENST00000476905 CPDO75976 1380 aa12.6□□□□□ -0.39
SSX2IP-206ENST00000476905 SLIT3O75094 1523 aa12.6□□□□□ -0.39
SSX2IP-206ENST00000476905 GLI3P10071 1580 aa12.59□□□□□ -0.39
SSX2IP-206ENST00000476905 AXIN2Q9Y2T1 843 aa12.59□□□□□ -0.39
SSX2IP-206ENST00000476905 USP31Q70CQ4 1352 aa12.59□□□□□ -0.39
SSX2IP-206ENST00000476905 CAMTA1Q9Y6Y1 1673 aa12.59□□□□□ -0.39
SSX2IP-206ENST00000476905 MON2Q7Z3U7 1717 aa12.59□□□□□ -0.39
SSX2IP-206ENST00000476905 FBLN1P23142 703 aa12.59□□□□□ -0.39
SSX2IP-206ENST00000476905 HDGFL2Q7Z4V5 671 aaPredicted RBP12.59□□□□□ -0.39
SSX2IP-206ENST00000476905 TERF2IPQ9NYB0 399 aa12.59□□□□□ -0.39
SSX2IP-206ENST00000476905 ARHGEF25Q86VW2 580 aa12.58□□□□□ -0.4
SSX2IP-206ENST00000476905 EP400Q96L91 3159 aa12.58□□□□□ -0.4
SSX2IP-206ENST00000476905 PLCH1Q4KWH8 1693 aa12.58□□□□□ -0.4
SSX2IP-206ENST00000476905 SOX12O15370 315 aa12.58□□□□□ -0.4
SSX2IP-206ENST00000476905 EDC4Q6P2E9 1401 aaKnown RBP12.58□□□□□ -0.4
SSX2IP-206ENST00000476905 ANKRD36BQ8N2N9 1353 aa12.58□□□□□ -0.4
SSX2IP-206ENST00000476905 CDK12Q9NYV4 1490 aaPredicted RBP12.58□□□□□ -0.4
SSX2IP-206ENST00000476905 ONECUT3O60422 494 aaPredicted RBP12.57□□□□□ -0.4
SSX2IP-206ENST00000476905 NRAPQ86VF7 1730 aa12.57□□□□□ -0.4
SSX2IP-206ENST00000476905 NINLQ9Y2I6 1382 aa12.57□□□□□ -0.4
SSX2IP-206ENST00000476905 COL14A1Q05707 1796 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms