RNA–Protein interactions for RNA: ENST00000475960.1

RBM34-206, Transcript of RNA binding motif protein 34, human

TSL 3

Gene RBM34, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM34-206	ENST00000475960	KIAA1468	Q9P260	1216 aa		13.75	□□□□□ -0.21
RBM34-206	ENST00000475960	RABGEF1	Q9UJ41	708 aa		13.75	□□□□□ -0.21
RBM34-206	ENST00000475960	PNMA3	Q9UL41	463 aa		13.75	□□□□□ -0.21
RBM34-206	ENST00000475960	SHANK2	Q9UPX8	1470 aa		13.74	□□□□□ -0.21
RBM34-206	ENST00000475960	CLCN1	P35523	988 aa		13.74	□□□□□ -0.21
RBM34-206	ENST00000475960	CLIP1	P30622	1438 aa		13.73	□□□□□ -0.21
RBM34-206	ENST00000475960	C3orf80	F5H4A9	247 aa		13.73	□□□□□ -0.21
RBM34-206	ENST00000475960	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.72	□□□□□ -0.21
RBM34-206	ENST00000475960	MDM2	Q00987	491 aa	Predicted RBP	13.72	□□□□□ -0.21
RBM34-206	ENST00000475960	GPCPD1	Q9NPB8	672 aa		13.72	□□□□□ -0.21
RBM34-206	ENST00000475960	VPS9D1	Q9Y2B5	631 aa		13.72	□□□□□ -0.21
RBM34-206	ENST00000475960	POTEM	A6NI47	508 aa		13.71	□□□□□ -0.21
RBM34-206	ENST00000475960	TK2	O00142	265 aa		13.71	□□□□□ -0.21
RBM34-206	ENST00000475960	POTEG	Q6S5H5	508 aa		13.71	□□□□□ -0.21
RBM34-206	ENST00000475960	TMUB1	Q9BVT8	246 aa		13.71	□□□□□ -0.21
RBM34-206	ENST00000475960	ABCC1	P33527	1531 aa		13.7	□□□□□ -0.22
RBM34-206	ENST00000475960	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.7	□□□□□ -0.22
RBM34-206	ENST00000475960	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM34-206	ENST00000475960	RCCD1	A6NED2	376 aa		13.69	□□□□□ -0.22
RBM34-206	ENST00000475960	LSM11	P83369	360 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
RBM34-206	ENST00000475960	TMEM132A	Q24JP5	1023 aa		13.69	□□□□□ -0.22
RBM34-206	ENST00000475960	REPIN1	Q9BWE0	567 aa	Known RBP	13.69	□□□□□ -0.22
RBM34-206	ENST00000475960	TRO	Q12816	1431 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM34-206	ENST00000475960	A2ML1	A8K2U0	1454 aa		13.68	□□□□□ -0.22
RBM34-206	ENST00000475960	SMAP	O00193	183 aa		13.68	□□□□□ -0.22
RBM34-206	ENST00000475960	DNAJB2	P25686	324 aa		13.68	□□□□□ -0.22
RBM34-206	ENST00000475960	NLRP7	Q8WX94	980 aa		13.68	□□□□□ -0.22
RBM34-206	ENST00000475960	DAXX	Q9UER7	740 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM34-206	ENST00000475960	RGS17	Q9UGC6	210 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM34-206	ENST00000475960	CLTC	Q00610	1675 aa	Known RBP	13.67	□□□□□ -0.22
RBM34-206	ENST00000475960	KIDINS220	Q9ULH0	1771 aa		13.67	□□□□□ -0.22
RBM34-206	ENST00000475960	POLR1A	O95602	1720 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM34-206	ENST00000475960	ITSN2	Q9NZM3	1697 aa		13.66	□□□□□ -0.22
RBM34-206	ENST00000475960	FMN1	Q68DA7	1419 aa		13.65	□□□□□ -0.22
RBM34-206	ENST00000475960	DNMT1	P26358	1616 aa	Known RBP	13.65	□□□□□ -0.22
RBM34-206	ENST00000475960	ALK	Q9UM73	1620 aa		13.65	□□□□□ -0.22
RBM34-206	ENST00000475960	NBPF3	Q9H094	633 aa		13.65	□□□□□ -0.22
RBM34-206	ENST00000475960	NEURL4	Q96JN8	1562 aa		13.65	□□□□□ -0.22
RBM34-206	ENST00000475960	RNF17	Q9BXT8	1623 aa	Known RBP	13.64	□□□□□ -0.23
RBM34-206	ENST00000475960	ADGRD1	Q6QNK2	874 aa		13.64	□□□□□ -0.23
RBM34-206	ENST00000475960	TMEM134	Q9H6X4	195 aa		13.64	□□□□□ -0.23
RBM34-206	ENST00000475960	PREX2	Q70Z35	1606 aa		13.64	□□□□□ -0.23
RBM34-206	ENST00000475960	VWDE	Q8N2E2	1590 aa		13.63	□□□□□ -0.23
RBM34-206	ENST00000475960	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.63	□□□□□ -0.23
RBM34-206	ENST00000475960	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.63	□□□□□ -0.23
RBM34-206	ENST00000475960	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.63	□□□□□ -0.23
RBM34-206	ENST00000475960	FAM98C	Q17RN3	349 aa	Known RBP	13.62	□□□□□ -0.23
RBM34-206	ENST00000475960	LAPTM4B	Q86VI4	370 aa		13.62	□□□□□ -0.23
RBM34-206	ENST00000475960	ANKLE2	Q86XL3	938 aa		13.62	□□□□□ -0.23
RBM34-206	ENST00000475960	DDRGK1	Q96HY6	314 aa		13.62	□□□□□ -0.23
RBM34-206	ENST00000475960	FAM117A	Q9C073	453 aa		13.62	□□□□□ -0.23
RBM34-206	ENST00000475960	CDC42BPB	Q9Y5S2	1711 aa		13.61	□□□□□ -0.23
RBM34-206	ENST00000475960	MS4A1	P11836	297 aa		13.61	□□□□□ -0.23
RBM34-206	ENST00000475960	SSTR3	P32745	418 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM34-206	ENST00000475960	SAMD9L	Q8IVG5	1584 aa		13.61	□□□□□ -0.23
RBM34-206	ENST00000475960	SPAG9	O60271	1321 aa	Known RBP	13.61	□□□□□ -0.23
RBM34-206	ENST00000475960	SYNM	O15061	1565 aa		13.6	□□□□□ -0.23
RBM34-206	ENST00000475960	PLXNC1	O60486	1568 aa		13.6	□□□□□ -0.23
RBM34-206	ENST00000475960	GGT6	Q6P531	493 aa		13.6	□□□□□ -0.23
RBM34-206	ENST00000475960	IL27	Q8NEV9	243 aa		13.6	□□□□□ -0.23
RBM34-206	ENST00000475960	NPHP4	O75161	1426 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM34-206	ENST00000475960	POTEA	Q6S8J7	498 aa		13.59	□□□□□ -0.23
RBM34-206	ENST00000475960	ANKRD13D	Q6ZTN6	518 aa		13.59	□□□□□ -0.23
RBM34-206	ENST00000475960	A2M	P01023	1474 aa		13.59	□□□□□ -0.23
RBM34-206	ENST00000475960	MRPL50	Q8N5N7	158 aa	Known RBP	13.58	□□□□□ -0.24
RBM34-206	ENST00000475960	ATP7A	Q04656	1500 aa		13.58	□□□□□ -0.24
RBM34-206	ENST00000475960	TNR	Q92752	1358 aa		13.58	□□□□□ -0.24
RBM34-206	ENST00000475960	HR	O43593	1189 aa		13.57	□□□□□ -0.24
RBM34-206	ENST00000475960	SULF1	Q8IWU6	871 aa		13.57	□□□□□ -0.24
RBM34-206	ENST00000475960	LRRC7	Q96NW7	1537 aa		13.57	□□□□□ -0.24
RBM34-206	ENST00000475960	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
RBM34-206	ENST00000475960	EEA1	Q15075	1411 aa		13.56	□□□□□ -0.24
RBM34-206	ENST00000475960	MED14	O60244	1454 aa		13.56	□□□□□ -0.24
RBM34-206	ENST00000475960	HDGF	P51858	240 aa	Known RBP	13.56	□□□□□ -0.24
RBM34-206	ENST00000475960	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM34-206	ENST00000475960	KRTAP3-3	Q9BYR6	98 aa		13.56	□□□□□ -0.24
RBM34-206	ENST00000475960	KRTAP3-2	Q9BYR7	98 aa		13.56	□□□□□ -0.24
RBM34-206	ENST00000475960	SYCP2	Q9BX26	1530 aa		13.55	□□□□□ -0.24
RBM34-206	ENST00000475960	DEPDC5	O75140	1603 aa		13.55	□□□□□ -0.24
RBM34-206	ENST00000475960	FAM135A	Q9P2D6	1515 aa		13.54	□□□□□ -0.24
RBM34-206	ENST00000475960	PLEKHG3	A1L390	1219 aa		13.54	□□□□□ -0.24
RBM34-206	ENST00000475960	INO80	Q9ULG1	1556 aa	Predicted RBP	13.54	□□□□□ -0.24
RBM34-206	ENST00000475960	SETD1A	O15047	1707 aa	Known RBP	13.53	□□□□□ -0.24
RBM34-206	ENST00000475960	SWT1	Q5T5J6	900 aa	Known RBP	13.53	□□□□□ -0.24
RBM34-206	ENST00000475960	STAC3	Q96MF2	364 aa		13.53	□□□□□ -0.24
RBM34-206	ENST00000475960	BEGAIN	Q9BUH8	593 aa		13.53	□□□□□ -0.24
RBM34-206	ENST00000475960	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM34-206	ENST00000475960	IQGAP1	P46940	1657 aa		13.53	□□□□□ -0.24
RBM34-206	ENST00000475960	DDX11L8	A8MPP1	907 aa		13.52	□□□□□ -0.25
RBM34-206	ENST00000475960	CDAN1	Q8IWY9	1227 aa		13.52	□□□□□ -0.25
RBM34-206	ENST00000475960	ZFR	Q96KR1	1074 aa	Known RBP	13.52	□□□□□ -0.25
RBM34-206	ENST00000475960	NLRP1	Q9C000	1473 aa		13.52	□□□□□ -0.25
RBM34-206	ENST00000475960	UGGT1	Q9NYU2	1555 aa		13.52	□□□□□ -0.25
RBM34-206	ENST00000475960	PZP	P20742	1482 aa		13.51	□□□□□ -0.25
RBM34-206	ENST00000475960	SLC4A3	P48751	1232 aa		13.51	□□□□□ -0.25
RBM34-206	ENST00000475960	CCDC18	Q5T9S5	1454 aa		13.5	□□□□□ -0.25
RBM34-206	ENST00000475960	PLEKHH2	Q8IVE3	1493 aa		13.5	□□□□□ -0.25
RBM34-206	ENST00000475960	CD46	P15529	392 aa		13.5	□□□□□ -0.25
RBM34-206	ENST00000475960	SAMD7	Q7Z3H4	446 aa		13.5	□□□□□ -0.25
RBM34-206	ENST00000475960	RSPH4A	Q5TD94	716 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms