RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 YTHDC2Q9H6S0 1430 aaKnown RBP16.57■□□□□ 0.24
CCNL1-216ENST00000475298 FSD2A1L4K1 749 aa16.57■□□□□ 0.24
CCNL1-216ENST00000475298 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
CCNL1-216ENST00000475298 NSD2O96028 1365 aa16.56■□□□□ 0.24
CCNL1-216ENST00000475298 ABCC11Q96J66 1382 aa16.56■□□□□ 0.24
CCNL1-216ENST00000475298 IGHDP01880 384 aa16.56■□□□□ 0.24
CCNL1-216ENST00000475298 PANK2Q9BZ23 570 aa16.56■□□□□ 0.24
CCNL1-216ENST00000475298 STAG3Q9UJ98 1225 aa16.56■□□□□ 0.24
CCNL1-216ENST00000475298 TNNQ9UQP3 1299 aa16.56■□□□□ 0.24
CCNL1-216ENST00000475298 USP19O94966 1318 aa16.56■□□□□ 0.24
CCNL1-216ENST00000475298 RARSP54136 660 aaKnown RBP16.55■□□□□ 0.24
CCNL1-216ENST00000475298 U2SURPO15042 1029 aaKnown RBP16.54■□□□□ 0.24
CCNL1-216ENST00000475298 MLECQ14165 292 aa16.54■□□□□ 0.24
CCNL1-216ENST00000475298 CD163L1Q9NR16 1453 aa16.54■□□□□ 0.24
CCNL1-216ENST00000475298 ALKQ9UM73 1620 aa16.54■□□□□ 0.24
CCNL1-216ENST00000475298 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
CCNL1-216ENST00000475298 FYB1O15117 783 aa16.53■□□□□ 0.24
CCNL1-216ENST00000475298 PDE3AQ14432 1141 aa16.53■□□□□ 0.24
CCNL1-216ENST00000475298 WDR63Q8IWG1 891 aa16.53■□□□□ 0.24
CCNL1-216ENST00000475298 DIP2BQ9P265 1576 aa16.53■□□□□ 0.24
CCNL1-216ENST00000475298 RLBP1P12271 317 aa16.52■□□□□ 0.23
CCNL1-216ENST00000475298 CDK19Q9BWU1 502 aa16.52■□□□□ 0.23
CCNL1-216ENST00000475298 ARXQ96QS3 562 aa16.51■□□□□ 0.23
CCNL1-216ENST00000475298 ATAD2Q6PL18 1390 aa16.51■□□□□ 0.23
CCNL1-216ENST00000475298 GOLGA6L3A6NEY3 463 aa16.51■□□□□ 0.23
CCNL1-216ENST00000475298 WAPLQ7Z5K2 1190 aa16.51■□□□□ 0.23
CCNL1-216ENST00000475298 CLUAP1Q96AJ1 413 aa16.51■□□□□ 0.23
CCNL1-216ENST00000475298 ANTXR1Q9H6X2 564 aa16.51■□□□□ 0.23
CCNL1-216ENST00000475298 TERF2IPQ9NYB0 399 aa16.51■□□□□ 0.23
CCNL1-216ENST00000475298 CABP1Q9NZU7 370 aa16.51■□□□□ 0.23
CCNL1-216ENST00000475298 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
CCNL1-216ENST00000475298 CLTCQ00610 1675 aaKnown RBP16.51■□□□□ 0.23
CCNL1-216ENST00000475298 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
CCNL1-216ENST00000475298 TSR2Q969E8 191 aaKnown RBP16.5■□□□□ 0.23
CCNL1-216ENST00000475298 PRDM4Q9UKN5 801 aa16.5■□□□□ 0.23
CCNL1-216ENST00000475298 NLRP1Q9C000 1473 aa16.5■□□□□ 0.23
CCNL1-216ENST00000475298 ADGRB2O60241 1585 aa16.49■□□□□ 0.23
CCNL1-216ENST00000475298 COL3A1P02461 1466 aaPredicted RBP16.49■□□□□ 0.23
CCNL1-216ENST00000475298 FBLN1P23142 703 aa16.49■□□□□ 0.23
CCNL1-216ENST00000475298 SLKQ9H2G2 1235 aaPredicted RBP16.49■□□□□ 0.23
CCNL1-216ENST00000475298 PLEKHF1Q96S99 279 aa16.48■□□□□ 0.23
CCNL1-216ENST00000475298 ERBB4Q15303 1308 aa16.48■□□□□ 0.23
CCNL1-216ENST00000475298 ARHGEF40Q8TER5 1519 aa16.48■□□□□ 0.23
CCNL1-216ENST00000475298 PDCL3Q9H2J4 239 aa16.48■□□□□ 0.23
CCNL1-216ENST00000475298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.47■□□□□ 0.23
CCNL1-216ENST00000475298 RBM10P98175 930 aaKnown RBP16.46■□□□□ 0.23
CCNL1-216ENST00000475298 HDGFL2Q7Z4V5 671 aaPredicted RBP16.46■□□□□ 0.23
CCNL1-216ENST00000475298 MYH16Q9H6N6 1097 aa16.46■□□□□ 0.23
CCNL1-216ENST00000475298 A2ML1A8K2U0 1454 aa16.46■□□□□ 0.23
CCNL1-216ENST00000475298 ANKRD26Q9UPS8 1709 aa16.46■□□□□ 0.23
CCNL1-216ENST00000475298 TMPOP42166 694 aaKnown RBP16.46■□□□□ 0.23
CCNL1-216ENST00000475298 CALD1Q05682 793 aaKnown RBP16.46■□□□□ 0.23
CCNL1-216ENST00000475298 TRIM35Q9UPQ4 493 aa16.45■□□□□ 0.22
CCNL1-216ENST00000475298 PCDHB15Q9Y5E8 787 aa16.45■□□□□ 0.22
CCNL1-216ENST00000475298 ESPNB1AK53 854 aa16.44■□□□□ 0.22
CCNL1-216ENST00000475298 RIMS2Q9UQ26 1411 aa16.44■□□□□ 0.22
CCNL1-216ENST00000475298 SEC24BO95487 1268 aa16.44■□□□□ 0.22
CCNL1-216ENST00000475298 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
CCNL1-216ENST00000475298 EXOSC9Q06265 439 aaKnown RBP16.43■□□□□ 0.22
CCNL1-216ENST00000475298 TPM2P07951 284 aa16.43■□□□□ 0.22
CCNL1-216ENST00000475298 AGLP35573 1532 aa16.42■□□□□ 0.22
CCNL1-216ENST00000475298 MED14O60244 1454 aa16.42■□□□□ 0.22
CCNL1-216ENST00000475298 DIAPH1O60610 1272 aaKnown RBP16.42■□□□□ 0.22
CCNL1-216ENST00000475298 KIF20BQ96Q89 1820 aa16.42■□□□□ 0.22
CCNL1-216ENST00000475298 AAMPQ13685 434 aa16.42■□□□□ 0.22
CCNL1-216ENST00000475298 BECN1Q14457 450 aa16.42■□□□□ 0.22
CCNL1-216ENST00000475298 SPATA31D1Q6ZQQ2 1576 aa16.41■□□□□ 0.22
CCNL1-216ENST00000475298 REREQ9P2R6 1566 aa16.41■□□□□ 0.22
CCNL1-216ENST00000475298 SETD1AO15047 1707 aaKnown RBP16.41■□□□□ 0.22
CCNL1-216ENST00000475298 RIPK4P57078 832 aa16.41■□□□□ 0.22
CCNL1-216ENST00000475298 GZF1Q9H116 711 aaPredicted RBP16.41■□□□□ 0.22
CCNL1-216ENST00000475298 A0A0U1RQG5 324 aaPredicted RBP16.4■□□□□ 0.22
CCNL1-216ENST00000475298 KIF13AQ9H1H9 1805 aa16.4■□□□□ 0.22
CCNL1-216ENST00000475298 MRE11P49959 708 aa16.4■□□□□ 0.22
CCNL1-216ENST00000475298 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
CCNL1-216ENST00000475298 NCKAP5LQ9HCH0 1330 aa16.39■□□□□ 0.21
CCNL1-216ENST00000475298 SMC4Q9NTJ3 1288 aa16.39■□□□□ 0.21
CCNL1-216ENST00000475298 METP08581 1390 aa16.39■□□□□ 0.21
CCNL1-216ENST00000475298 PNPLA6Q8IY17 1366 aa16.39■□□□□ 0.21
CCNL1-216ENST00000475298 MCM4P33991 863 aa16.38■□□□□ 0.21
CCNL1-216ENST00000475298 ZKSCAN2Q63HK3 967 aa16.38■□□□□ 0.21
CCNL1-216ENST00000475298 TXNDC2Q86VQ3 553 aa16.38■□□□□ 0.21
CCNL1-216ENST00000475298 SSH1Q8WYL5 1049 aa16.38■□□□□ 0.21
CCNL1-216ENST00000475298 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
CCNL1-216ENST00000475298 ZRANB1Q9UGI0 708 aa16.38■□□□□ 0.21
CCNL1-216ENST00000475298 PPP6R1Q9UPN7 881 aa16.38■□□□□ 0.21
CCNL1-216ENST00000475298 MVPQ14764 893 aaKnown RBP16.37■□□□□ 0.21
CCNL1-216ENST00000475298 FTSJ3Q8IY81 847 aaKnown RBP16.37■□□□□ 0.21
CCNL1-216ENST00000475298 DLC1Q96QB1 1528 aa16.37■□□□□ 0.21
CCNL1-216ENST00000475298 LRRC7Q96NW7 1537 aa16.37■□□□□ 0.21
CCNL1-216ENST00000475298 NRXN3Q9Y4C0 1643 aa16.37■□□□□ 0.21
CCNL1-216ENST00000475298 PMFBP1Q8TBY8 1022 aa16.37■□□□□ 0.21
CCNL1-216ENST00000475298 DZIP1LQ8IYY4 767 aaKnown RBP16.36■□□□□ 0.21
CCNL1-216ENST00000475298 HMOX1P09601 288 aa16.36■□□□□ 0.21
CCNL1-216ENST00000475298 TRIM27P14373 513 aa16.36■□□□□ 0.21
CCNL1-216ENST00000475298 PRKAR2BP31323 418 aa16.36■□□□□ 0.21
CCNL1-216ENST00000475298 NME9Q86XW9 330 aa16.36■□□□□ 0.21
CCNL1-216ENST00000475298 PDZRN3Q9UPQ7 1066 aa16.36■□□□□ 0.21
CCNL1-216ENST00000475298 EMILIN1Q9Y6C2 1016 aa16.36■□□□□ 0.21
CCNL1-216ENST00000475298 GRPEL1Q9HAV7 217 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms