RNA–Protein interactions for RNA: ENST00000474743.5

SH3D19-206, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-206ENST00000474743 LRRC59Q96AG4 307 aaKnown RBP12.18□□□□□ -0.46
SH3D19-206ENST00000474743 PRAM1Q96QH2 718 aa12.18□□□□□ -0.46
SH3D19-206ENST00000474743 TRIM26Q12899 539 aaPredicted RBP12.17□□□□□ -0.46
SH3D19-206ENST00000474743 ESCO1Q5FWF5 840 aa12.17□□□□□ -0.46
SH3D19-206ENST00000474743 MS4A3Q96HJ5 214 aa12.17□□□□□ -0.46
SH3D19-206ENST00000474743 LRP6O75581 1613 aa12.17□□□□□ -0.46
SH3D19-206ENST00000474743 ITSN1Q15811 1721 aa12.17□□□□□ -0.46
SH3D19-206ENST00000474743 COL22A1Q8NFW1 1626 aaPredicted RBP12.16□□□□□ -0.46
SH3D19-206ENST00000474743 ORAI2Q96SN7 254 aa12.16□□□□□ -0.46
SH3D19-206ENST00000474743 ANKARQ7Z5J8 1434 aa12.16□□□□□ -0.46
SH3D19-206ENST00000474743 PNPLA6Q8IY17 1366 aa12.16□□□□□ -0.46
SH3D19-206ENST00000474743 RGPD8O14715 1765 aaPredicted RBP12.15□□□□□ -0.46
SH3D19-206ENST00000474743 SAFB2Q14151 953 aaKnown RBP eCLIP12.15□□□□□ -0.46
SH3D19-206ENST00000474743 TRAK1Q9UPV9 953 aa12.15□□□□□ -0.46
SH3D19-206ENST00000474743 TULP4Q9NRJ4 1543 aa12.15□□□□□ -0.46
SH3D19-206ENST00000474743 PXDNQ92626 1479 aa12.14□□□□□ -0.47
SH3D19-206ENST00000474743 SOS2Q07890 1332 aaPredicted RBP12.14□□□□□ -0.47
SH3D19-206ENST00000474743 SOCS7O14512 581 aa12.14□□□□□ -0.47
SH3D19-206ENST00000474743 NUTM2FA1L443 756 aa12.13□□□□□ -0.47
SH3D19-206ENST00000474743 MMRN1Q13201 1228 aa12.13□□□□□ -0.47
SH3D19-206ENST00000474743 DDX17Q92841 729 aaKnown RBP12.13□□□□□ -0.47
SH3D19-206ENST00000474743 TRPM1Q7Z4N2 1603 aa12.12□□□□□ -0.47
SH3D19-206ENST00000474743 USP32Q8NFA0 1604 aa12.12□□□□□ -0.47
SH3D19-206ENST00000474743 NUTM2BA6NNL0 878 aaPredicted RBP12.12□□□□□ -0.47
SH3D19-206ENST00000474743 NUTM2EB1AL46 878 aaPredicted RBP12.12□□□□□ -0.47
SH3D19-206ENST00000474743 NUTM2AQ8IVF1 878 aaPredicted RBP12.12□□□□□ -0.47
SH3D19-206ENST00000474743 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
SH3D19-206ENST00000474743 QRICH2Q9H0J4 1663 aa12.11□□□□□ -0.47
SH3D19-206ENST00000474743 FOXO3O43524 673 aa12.11□□□□□ -0.47
SH3D19-206ENST00000474743 ZNF772Q68DY9 489 aaPredicted RBP12.11□□□□□ -0.47
SH3D19-206ENST00000474743 MARF1Q9Y4F3 1742 aaKnown RBP12.11□□□□□ -0.47
SH3D19-206ENST00000474743 TONSLQ96HA7 1378 aa12.09□□□□□ -0.47
SH3D19-206ENST00000474743 NEUROD1Q13562 356 aa12.09□□□□□ -0.47
SH3D19-206ENST00000474743 HIRIP3Q9BW71 556 aaPredicted RBP12.09□□□□□ -0.47
SH3D19-206ENST00000474743 PHF8Q9UPP1 1060 aa12.09□□□□□ -0.47
SH3D19-206ENST00000474743 TNS3Q68CZ2 1445 aa12.09□□□□□ -0.47
SH3D19-206ENST00000474743 TOPAZ1Q8N9V7 1692 aa12.08□□□□□ -0.48
SH3D19-206ENST00000474743 PSME1Q06323 249 aa12.08□□□□□ -0.48
SH3D19-206ENST00000474743 L3MBTL2Q969R5 705 aa12.08□□□□□ -0.48
SH3D19-206ENST00000474743 RGS17Q9UGC6 210 aaPredicted RBP12.08□□□□□ -0.48
SH3D19-206ENST00000474743 ATP7BP35670 1465 aa12.08□□□□□ -0.48
SH3D19-206ENST00000474743 ARHGEF10O15013 1369 aa12.07□□□□□ -0.48
SH3D19-206ENST00000474743 ROCK2O75116 1388 aaKnown RBP12.07□□□□□ -0.48
SH3D19-206ENST00000474743 WASLO00401 505 aaPredicted RBP12.07□□□□□ -0.48
SH3D19-206ENST00000474743 XPCQ01831 940 aaPredicted RBP12.07□□□□□ -0.48
SH3D19-206ENST00000474743 C8orf37Q96NL8 207 aa12.07□□□□□ -0.48
SH3D19-206ENST00000474743 SIN3AQ96ST3 1273 aa12.07□□□□□ -0.48
SH3D19-206ENST00000474743 GPRASP1Q5JY77 1395 aa12.06□□□□□ -0.48
SH3D19-206ENST00000474743 ABCA3Q99758 1704 aa12.06□□□□□ -0.48
SH3D19-206ENST00000474743 ATN1P54259 1190 aaPredicted RBP12.06□□□□□ -0.48
SH3D19-206ENST00000474743 AFF2P51816 1311 aa12.06□□□□□ -0.48
SH3D19-206ENST00000474743 CENPJQ9HC77 1338 aaPredicted RBP12.06□□□□□ -0.48
SH3D19-206ENST00000474743 TRPM3Q9HCF6 1732 aaPredicted RBP12.06□□□□□ -0.48
SH3D19-206ENST00000474743 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
SH3D19-206ENST00000474743 ADAMTS2O95450 1211 aa12.05□□□□□ -0.48
SH3D19-206ENST00000474743 POTEAQ6S8J7 498 aa12.05□□□□□ -0.48
SH3D19-206ENST00000474743 KRT28Q7Z3Y7 464 aa12.05□□□□□ -0.48
SH3D19-206ENST00000474743 SPNS2Q8IVW8 549 aa12.05□□□□□ -0.48
SH3D19-206ENST00000474743 SPATA31A3Q5VYP0 1347 aa12.05□□□□□ -0.48
SH3D19-206ENST00000474743 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
SH3D19-206ENST00000474743 NBPF1Q3BBV0 1214 aa12.04□□□□□ -0.48
SH3D19-206ENST00000474743 NGLY1Q96IV0 654 aa12.04□□□□□ -0.48
SH3D19-206ENST00000474743 ALS2Q96Q42 1657 aa12.03□□□□□ -0.48
SH3D19-206ENST00000474743 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.03□□□□□ -0.48
SH3D19-206ENST00000474743 RALGAPBQ86X10 1494 aa12.03□□□□□ -0.48
SH3D19-206ENST00000474743 CDK12Q9NYV4 1490 aaPredicted RBP12.03□□□□□ -0.48
SH3D19-206ENST00000474743 PMFBP1Q8TBY8 1022 aa12.03□□□□□ -0.48
SH3D19-206ENST00000474743 POTEFA5A3E0 1075 aa12.02□□□□□ -0.49
SH3D19-206ENST00000474743 NGDNQ8NEJ9 315 aaKnown RBP12.02□□□□□ -0.49
SH3D19-206ENST00000474743 PRR36Q9H6K5 1346 aa12.02□□□□□ -0.49
SH3D19-206ENST00000474743 PLCH1Q4KWH8 1693 aa12.01□□□□□ -0.49
SH3D19-206ENST00000474743 RXRBP28702 533 aa12.01□□□□□ -0.49
SH3D19-206ENST00000474743 SRPK2P78362 688 aaKnown RBP12.01□□□□□ -0.49
SH3D19-206ENST00000474743 LMOD2Q6P5Q4 547 aa12.01□□□□□ -0.49
SH3D19-206ENST00000474743 NWD2Q9ULI1 1742 aa12□□□□□ -0.49
SH3D19-206ENST00000474743 NUDT16Q96DE0 195 aaKnown RBP12□□□□□ -0.49
SH3D19-206ENST00000474743 CDK19Q9BWU1 502 aa12□□□□□ -0.49
SH3D19-206ENST00000474743 USP21Q9UK80 565 aa11.99□□□□□ -0.49
SH3D19-206ENST00000474743 TRPC5Q9UL62 973 aaPredicted RBP11.99□□□□□ -0.49
SH3D19-206ENST00000474743 CCDC61Q9Y6R9 512 aa11.99□□□□□ -0.49
SH3D19-206ENST00000474743 EVC2Q86UK5 1308 aa11.99□□□□□ -0.49
SH3D19-206ENST00000474743 PPIP5K1Q6PFW1 1433 aa11.99□□□□□ -0.49
SH3D19-206ENST00000474743 CRYBG1Q9Y4K1 1723 aa11.98□□□□□ -0.49
SH3D19-206ENST00000474743 POLR3AO14802 1390 aaPredicted RBP11.98□□□□□ -0.49
SH3D19-206ENST00000474743 PHRF1Q9P1Y6 1649 aaKnown RBP11.97□□□□□ -0.49
SH3D19-206ENST00000474743 SBNO2Q9Y2G9 1366 aa11.97□□□□□ -0.49
SH3D19-206ENST00000474743 RBM6P78332 1123 aaKnown RBP11.97□□□□□ -0.49
SH3D19-206ENST00000474743 FNBP4Q8N3X1 1017 aaPredicted RBP11.97□□□□□ -0.49
SH3D19-206ENST00000474743 CARD11Q9BXL7 1154 aa11.97□□□□□ -0.49
SH3D19-206ENST00000474743 COL14A1Q05707 1796 aaKnown RBP11.97□□□□□ -0.49
SH3D19-206ENST00000474743 RGS12O14924 1447 aa11.96□□□□□ -0.49
SH3D19-206ENST00000474743 ATRNO75882 1429 aa11.96□□□□□ -0.49
SH3D19-206ENST00000474743 CLSPNQ9HAW4 1339 aa11.96□□□□□ -0.49
SH3D19-206ENST00000474743 ST18O60284 1047 aa11.96□□□□□ -0.49
SH3D19-206ENST00000474743 QTRT2Q9H974 415 aaKnown RBP11.96□□□□□ -0.49
SH3D19-206ENST00000474743 BRD4O60885 1362 aaPredicted RBP11.95□□□□□ -0.5
SH3D19-206ENST00000474743 ATAD2Q6PL18 1390 aa11.95□□□□□ -0.5
SH3D19-206ENST00000474743 PLEKHG5O94827 1062 aa11.95□□□□□ -0.5
SH3D19-206ENST00000474743 SLIT2O94813 1529 aa11.95□□□□□ -0.5
SH3D19-206ENST00000474743 ACEP12821 1306 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms