RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ATP10BO94823 1461 aa5.65□□□□□ -1.51
CCNL1-215ENST00000474539 SOS1Q07889 1333 aaPredicted RBP5.64□□□□□ -1.51
CCNL1-215ENST00000474539 ST18O60284 1047 aa5.64□□□□□ -1.51
CCNL1-215ENST00000474539 ZNF772Q68DY9 489 aaPredicted RBP5.64□□□□□ -1.51
CCNL1-215ENST00000474539 ZNF530Q6P9A1 599 aaPredicted RBP5.64□□□□□ -1.51
CCNL1-215ENST00000474539 SLC4A10Q6U841 1118 aa5.64□□□□□ -1.51
CCNL1-215ENST00000474539 KRT28Q7Z3Y7 464 aa5.64□□□□□ -1.51
CCNL1-215ENST00000474539 C16orf71Q8IYS4 520 aaPredicted RBP5.64□□□□□ -1.51
CCNL1-215ENST00000474539 REC8O95072 547 aa5.64□□□□□ -1.51
CCNL1-215ENST00000474539 KCNA6P17658 529 aa5.64□□□□□ -1.51
CCNL1-215ENST00000474539 CCT4P50991 539 aaKnown RBP5.64□□□□□ -1.51
CCNL1-215ENST00000474539 RIPK4P57078 832 aa5.64□□□□□ -1.51
CCNL1-215ENST00000474539 SIRT1Q96EB6 747 aa5.64□□□□□ -1.51
CCNL1-215ENST00000474539 RBM42Q9BTD8 480 aaKnown RBP5.64□□□□□ -1.51
CCNL1-215ENST00000474539 DIAPH3Q9NSV4 1193 aa5.64□□□□□ -1.51
CCNL1-215ENST00000474539 R3HCC1Q9Y3T6 440 aaKnown RBP5.64□□□□□ -1.51
CCNL1-215ENST00000474539 RIMS2Q9UQ26 1411 aa5.64□□□□□ -1.51
CCNL1-215ENST00000474539 PBRM1Q86U86 1689 aa5.64□□□□□ -1.51
CCNL1-215ENST00000474539 WASLO00401 505 aaPredicted RBP5.64□□□□□ -1.51
CCNL1-215ENST00000474539 IGHMBP2P38935 993 aaKnown RBP5.64□□□□□ -1.51
CCNL1-215ENST00000474539 MTHFSP49914 203 aa5.64□□□□□ -1.51
CCNL1-215ENST00000474539 HOOK2Q96ED9 719 aa5.64□□□□□ -1.51
CCNL1-215ENST00000474539 NACAP1Q9BZK3 213 aa5.64□□□□□ -1.51
CCNL1-215ENST00000474539 KIF7Q2M1P5 1343 aa5.63□□□□□ -1.51
CCNL1-215ENST00000474539 CDK13Q14004 1512 aaKnown RBP5.63□□□□□ -1.51
CCNL1-215ENST00000474539 FCHSD2O94868 740 aa5.63□□□□□ -1.51
CCNL1-215ENST00000474539 TRIM21P19474 475 aaKnown RBP5.63□□□□□ -1.51
CCNL1-215ENST00000474539 RASSF8Q8NHQ8 419 aa5.63□□□□□ -1.51
CCNL1-215ENST00000474539 AK7Q96M32 723 aa5.63□□□□□ -1.51
CCNL1-215ENST00000474539 TOMM22Q9NS69 142 aa5.63□□□□□ -1.51
CCNL1-215ENST00000474539 CEP170Q5SW79 1584 aa5.63□□□□□ -1.51
CCNL1-215ENST00000474539 EIF2AK4Q9P2K8 1649 aaKnown RBP5.63□□□□□ -1.51
CCNL1-215ENST00000474539 ST5P78524 1137 aa5.63□□□□□ -1.51
CCNL1-215ENST00000474539 CCDC158Q5M9N0 1113 aa5.63□□□□□ -1.51
CCNL1-215ENST00000474539 GBP4Q96PP9 640 aa5.63□□□□□ -1.51
CCNL1-215ENST00000474539 ZNF644Q9H582 1327 aaPredicted RBP5.63□□□□□ -1.51
CCNL1-215ENST00000474539 PCF11O94913 1555 aaKnown RBP5.63□□□□□ -1.51
CCNL1-215ENST00000474539 BAG6P46379 1132 aa5.63□□□□□ -1.51
CCNL1-215ENST00000474539 FKBP5Q13451 457 aaPredicted RBP5.63□□□□□ -1.51
CCNL1-215ENST00000474539 YEATS2Q9ULM3 1422 aa5.63□□□□□ -1.51
CCNL1-215ENST00000474539 SAFBQ15424 915 aaKnown RBP eCLIP5.63□□□□□ -1.51
CCNL1-215ENST00000474539 SLC26A8Q96RN1 970 aa5.63□□□□□ -1.51
CCNL1-215ENST00000474539 HIRIP3Q9BW71 556 aaPredicted RBP5.63□□□□□ -1.51
CCNL1-215ENST00000474539 TRIM6-TRIM34B2RNG4 842 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 HSP90AA2PQ14568 343 aaPredicted RBP5.62□□□□□ -1.51
CCNL1-215ENST00000474539 FBXW7Q969H0 707 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 STK32BQ9NY57 414 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 AKAP2Q9Y2D5 859 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 ABCA5Q8WWZ7 1642 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 PHF14O94880 888 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 UBTFL1P0CB47 393 aaPredicted RBP5.62□□□□□ -1.51
CCNL1-215ENST00000474539 CFAP70Q5T0N1 1121 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 NYXQ9GZU5 481 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 PIK3R4Q99570 1358 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 B4DLN1 442 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 NF2P35240 595 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 MRPL12P52815 198 aaKnown RBP5.62□□□□□ -1.51
CCNL1-215ENST00000474539 PPP1R42Q7Z4L9 355 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 IFNL2Q8IZJ0 200 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 PDZRN3Q9UPQ7 1066 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 SCAF11Q99590 1463 aaKnown RBP5.62□□□□□ -1.51
CCNL1-215ENST00000474539 NLRP1Q9C000 1473 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 LDHCP07864 332 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 ANKRD20A12PQ8NF67 263 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 MPHOSPH8Q99549 860 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 CABP2Q9NPB3 220 aa5.62□□□□□ -1.51
CCNL1-215ENST00000474539 GPATCH8Q9UKJ3 1502 aaKnown RBP5.61□□□□□ -1.51
CCNL1-215ENST00000474539 ZMYM3Q14202 1370 aa5.61□□□□□ -1.51
CCNL1-215ENST00000474539 VPS53Q5VIR6 699 aa5.61□□□□□ -1.51
CCNL1-215ENST00000474539 C14orf93Q9H972 538 aaKnown RBP5.61□□□□□ -1.51
CCNL1-215ENST00000474539 EHMT1Q9H9B1 1298 aa5.61□□□□□ -1.51
CCNL1-215ENST00000474539 ABCC5O15440 1437 aa5.61□□□□□ -1.51
CCNL1-215ENST00000474539 ANKRD36BQ8N2N9 1353 aa5.61□□□□□ -1.51
CCNL1-215ENST00000474539 DHX16O60231 1041 aaKnown RBP5.61□□□□□ -1.51
CCNL1-215ENST00000474539 EIF2S2P20042 333 aaKnown RBP5.61□□□□□ -1.51
CCNL1-215ENST00000474539 PSMA5P28066 241 aa5.61□□□□□ -1.51
CCNL1-215ENST00000474539 ARHGEF6Q15052 776 aa5.61□□□□□ -1.51
CCNL1-215ENST00000474539 RALYLQ86SE5 291 aaKnown RBP5.61□□□□□ -1.51
CCNL1-215ENST00000474539 WDR63Q8IWG1 891 aa5.61□□□□□ -1.51
CCNL1-215ENST00000474539 HDAC9Q9UKV0 1011 aa5.61□□□□□ -1.51
CCNL1-215ENST00000474539 TRAPPC8Q9Y2L5 1435 aa5.61□□□□□ -1.51
CCNL1-215ENST00000474539 PDE6BP35913 854 aa5.61□□□□□ -1.51
CCNL1-215ENST00000474539 PTPRKQ15262 1439 aa5.61□□□□□ -1.51
CCNL1-215ENST00000474539 PIK3C2GO75747 1445 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 GNAT3A8MTJ3 354 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 PTMAP06454 111 aaKnown RBP5.6□□□□□ -1.51
CCNL1-215ENST00000474539 CCDC178Q5BJE1 867 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 SPTY2D1Q68D10 685 aaPredicted RBP5.6□□□□□ -1.51
CCNL1-215ENST00000474539 CLASRPQ8N2M8 674 aaKnown RBP5.6□□□□□ -1.51
CCNL1-215ENST00000474539 SRCIN1Q9C0H9 1055 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 MYO1BO43795 1136 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 ZGPATQ8N5A5 531 aaKnown RBP5.6□□□□□ -1.51
CCNL1-215ENST00000474539 RPGRQ92834 1020 aaKnown RBP5.6□□□□□ -1.51
CCNL1-215ENST00000474539 DNAJC2Q99543 621 aaKnown RBP5.6□□□□□ -1.51
CCNL1-215ENST00000474539 BCL11BQ9C0K0 894 aaPredicted RBP5.6□□□□□ -1.51
CCNL1-215ENST00000474539 TPM1P09493 284 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 CCDC57Q2TAC2 916 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 LARP1Q6PKG0 1096 aaKnown RBP5.6□□□□□ -1.51
CCNL1-215ENST00000474539 CERS3Q8IU89 383 aa5.6□□□□□ -1.51
CCNL1-215ENST00000474539 FMNL2Q96PY5 1086 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms