RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 COL16A1Q07092 1604 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC12-217ENST00000473348 CRYBG1Q9Y4K1 1723 aa17.22■□□□□ 0.35
TRAPPC12-217ENST00000473348 BRD4O60885 1362 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC12-217ENST00000473348 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.35
TRAPPC12-217ENST00000473348 ABCA3Q99758 1704 aa17.21■□□□□ 0.35
TRAPPC12-217ENST00000473348 PER1O15534 1290 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC12-217ENST00000473348 PIP4K2BP78356 416 aa17.21■□□□□ 0.35
TRAPPC12-217ENST00000473348 PSME1Q06323 249 aa17.21■□□□□ 0.35
TRAPPC12-217ENST00000473348 DDX17Q92841 729 aaKnown RBP17.21■□□□□ 0.35
TRAPPC12-217ENST00000473348 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.35
TRAPPC12-217ENST00000473348 XPCQ01831 940 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC12-217ENST00000473348 PHRF1Q9P1Y6 1649 aaKnown RBP17.2■□□□□ 0.34
TRAPPC12-217ENST00000473348 TTC21BQ7Z4L5 1316 aa17.2■□□□□ 0.34
TRAPPC12-217ENST00000473348 KRT28Q7Z3Y7 464 aa17.19■□□□□ 0.34
TRAPPC12-217ENST00000473348 CGNL1Q0VF96 1302 aa17.19■□□□□ 0.34
TRAPPC12-217ENST00000473348 TTC21AQ8NDW8 1320 aa17.19■□□□□ 0.34
TRAPPC12-217ENST00000473348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRAPPC12-217ENST00000473348 MAP2P11137 1827 aaKnown RBP17.18■□□□□ 0.34
TRAPPC12-217ENST00000473348 TNS3Q68CZ2 1445 aa17.18■□□□□ 0.34
TRAPPC12-217ENST00000473348 SBNO1A3KN83 1393 aa17.17■□□□□ 0.34
TRAPPC12-217ENST00000473348 NSD2O96028 1365 aa17.17■□□□□ 0.34
TRAPPC12-217ENST00000473348 AMER1Q5JTC6 1135 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC12-217ENST00000473348 DIEXFQ68CQ4 756 aaKnown RBP17.17■□□□□ 0.34
TRAPPC12-217ENST00000473348 LTN1O94822 1766 aa17.17■□□□□ 0.34
TRAPPC12-217ENST00000473348 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
TRAPPC12-217ENST00000473348 MED1Q15648 1581 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC12-217ENST00000473348 PAK3O75914 559 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC12-217ENST00000473348 COL22A1Q8NFW1 1626 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC12-217ENST00000473348 SOS2Q07890 1332 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC12-217ENST00000473348 OVOS2A0A0J9YW53 1432 aa17.15■□□□□ 0.34
TRAPPC12-217ENST00000473348 OVOS2Q6IE36 1432 aa17.15■□□□□ 0.34
TRAPPC12-217ENST00000473348 NME9Q86XW9 330 aa17.15■□□□□ 0.34
TRAPPC12-217ENST00000473348 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
TRAPPC12-217ENST00000473348 CNGB1Q14028 1251 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC12-217ENST00000473348 FYB1O15117 783 aa17.13■□□□□ 0.33
TRAPPC12-217ENST00000473348 CC2D1BQ5T0F9 858 aaKnown RBP17.13■□□□□ 0.33
TRAPPC12-217ENST00000473348 USP31Q70CQ4 1352 aa17.13■□□□□ 0.33
TRAPPC12-217ENST00000473348 SLIT3O75094 1523 aa17.12■□□□□ 0.33
TRAPPC12-217ENST00000473348 GGNBP2Q9H3C7 697 aa17.12■□□□□ 0.33
TRAPPC12-217ENST00000473348 SPATA31A3Q5VYP0 1347 aa17.12■□□□□ 0.33
TRAPPC12-217ENST00000473348 ARHGEF10O15013 1369 aa17.12■□□□□ 0.33
TRAPPC12-217ENST00000473348 ABTB2Q8N961 1025 aa17.11■□□□□ 0.33
TRAPPC12-217ENST00000473348 ZRANB1Q9UGI0 708 aa17.11■□□□□ 0.33
TRAPPC12-217ENST00000473348 LMOD2Q6P5Q4 547 aa17.1■□□□□ 0.33
TRAPPC12-217ENST00000473348 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
TRAPPC12-217ENST00000473348 NUTM2GQ5VZR2 741 aa17.09■□□□□ 0.33
TRAPPC12-217ENST00000473348 COG3Q96JB2 828 aa17.09■□□□□ 0.33
TRAPPC12-217ENST00000473348 NFAT5O94916 1531 aa17.08■□□□□ 0.32
TRAPPC12-217ENST00000473348 ANP32CO43423 234 aa17.08■□□□□ 0.32
TRAPPC12-217ENST00000473348 NLRP6P59044 892 aa17.08■□□□□ 0.32
TRAPPC12-217ENST00000473348 MORC1Q86VD1 984 aa17.07■□□□□ 0.32
TRAPPC12-217ENST00000473348 RGPD5Q99666 1765 aa17.07■□□□□ 0.32
TRAPPC12-217ENST00000473348 PNPLA6Q8IY17 1366 aa17.06■□□□□ 0.32
TRAPPC12-217ENST00000473348 USP19O94966 1318 aa17.06■□□□□ 0.32
TRAPPC12-217ENST00000473348 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
TRAPPC12-217ENST00000473348 LRRC59Q96AG4 307 aaKnown RBP17.06■□□□□ 0.32
TRAPPC12-217ENST00000473348 PRKRIP1Q9H875 184 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC12-217ENST00000473348 PEAK1Q9H792 1746 aa17.05■□□□□ 0.32
TRAPPC12-217ENST00000473348 RALBP1Q15311 655 aa17.05■□□□□ 0.32
TRAPPC12-217ENST00000473348 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
TRAPPC12-217ENST00000473348 TNNT2P45379 298 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC12-217ENST00000473348 HSPA1LP34931 641 aa17.02■□□□□ 0.32
TRAPPC12-217ENST00000473348 COL18A1P39060 1754 aa17.02■□□□□ 0.31
TRAPPC12-217ENST00000473348 AATKQ6ZMQ8 1374 aa17.02■□□□□ 0.31
TRAPPC12-217ENST00000473348 SOX12O15370 315 aa17.01■□□□□ 0.31
TRAPPC12-217ENST00000473348 SMG6Q86US8 1419 aaKnown RBP17.01■□□□□ 0.31
TRAPPC12-217ENST00000473348 JCADQ9P266 1359 aa17.01■□□□□ 0.31
TRAPPC12-217ENST00000473348 PLCH1Q4KWH8 1693 aa17.01■□□□□ 0.31
TRAPPC12-217ENST00000473348 MYBBP1AQ9BQG0 1328 aaKnown RBP17■□□□□ 0.31
TRAPPC12-217ENST00000473348 CABLES1Q8TDN4 633 aa17■□□□□ 0.31
TRAPPC12-217ENST00000473348 PPP2R1AP30153 589 aa16.99■□□□□ 0.31
TRAPPC12-217ENST00000473348 KCNH5Q8NCM2 988 aa16.99■□□□□ 0.31
TRAPPC12-217ENST00000473348 COL14A1Q05707 1796 aaKnown RBP16.99■□□□□ 0.31
TRAPPC12-217ENST00000473348 CDK12Q9NYV4 1490 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC12-217ENST00000473348 ABCC6O95255 1503 aa16.98■□□□□ 0.31
TRAPPC12-217ENST00000473348 FBXO41Q8TF61 875 aa16.98■□□□□ 0.31
TRAPPC12-217ENST00000473348 LMO7Q8WWI1 1683 aa16.97■□□□□ 0.31
TRAPPC12-217ENST00000473348 RGPD2P0DJD1 1756 aa16.97■□□□□ 0.31
TRAPPC12-217ENST00000473348 GCP02774 474 aa16.97■□□□□ 0.31
TRAPPC12-217ENST00000473348 FBLN1P23142 703 aa16.97■□□□□ 0.31
TRAPPC12-217ENST00000473348 MIER1Q8N108 512 aa16.97■□□□□ 0.31
TRAPPC12-217ENST00000473348 HAP1P54257 671 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC12-217ENST00000473348 RRS1Q15050 365 aaKnown RBP16.96■□□□□ 0.31
TRAPPC12-217ENST00000473348 FAM208AQ9UK61 1670 aaKnown RBP16.96■□□□□ 0.31
TRAPPC12-217ENST00000473348 NWD2Q9ULI1 1742 aa16.95■□□□□ 0.3
TRAPPC12-217ENST00000473348 MAP3K19Q56UN5 1328 aa16.95■□□□□ 0.3
TRAPPC12-217ENST00000473348 COL3A1P02461 1466 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC12-217ENST00000473348 RTL1A6NKG5 1358 aa16.94■□□□□ 0.3
TRAPPC12-217ENST00000473348 CPDO75976 1380 aa16.94■□□□□ 0.3
TRAPPC12-217ENST00000473348 POLKQ9UBT6 870 aa16.94■□□□□ 0.3
TRAPPC12-217ENST00000473348 EMILIN1Q9Y6C2 1016 aa16.94■□□□□ 0.3
TRAPPC12-217ENST00000473348 NRAPQ86VF7 1730 aa16.93■□□□□ 0.3
TRAPPC12-217ENST00000473348 FLT4P35916 1363 aa16.93■□□□□ 0.3
TRAPPC12-217ENST00000473348 KIF24Q5T7B8 1368 aa16.93■□□□□ 0.3
TRAPPC12-217ENST00000473348 KIAA0232Q92628 1395 aa16.93■□□□□ 0.3
TRAPPC12-217ENST00000473348 MTHFSP49914 203 aa16.93■□□□□ 0.3
TRAPPC12-217ENST00000473348 ZC3H6P61129 1189 aaKnown RBP16.93■□□□□ 0.3
TRAPPC12-217ENST00000473348 RGPD1P0DJD0 1748 aa16.93■□□□□ 0.3
TRAPPC12-217ENST00000473348 LRP6O75581 1613 aa16.92■□□□□ 0.3
TRAPPC12-217ENST00000473348 ZBTB7CA1YPR0 619 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms