RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 MED1Q15648 1581 aaPredicted RBP7.37□□□□□ -1.23
LRCH3-214ENST00000473177 HDGFP51858 240 aaKnown RBP7.37□□□□□ -1.23
LRCH3-214ENST00000473177 SWT1Q5T5J6 900 aaKnown RBP7.37□□□□□ -1.23
LRCH3-214ENST00000473177 ZFRQ96KR1 1074 aaKnown RBP7.37□□□□□ -1.23
LRCH3-214ENST00000473177 GOPCQ9HD26 462 aa7.37□□□□□ -1.23
LRCH3-214ENST00000473177 LTBP4Q8N2S1 1624 aa7.37□□□□□ -1.23
LRCH3-214ENST00000473177 CFAP74Q9C0B2 1584 aa7.37□□□□□ -1.23
LRCH3-214ENST00000473177 MAGI2Q86UL8 1455 aa7.36□□□□□ -1.23
LRCH3-214ENST00000473177 DDX11L8A8MPP1 907 aa7.36□□□□□ -1.23
LRCH3-214ENST00000473177 ESF1Q9H501 851 aaKnown RBP7.36□□□□□ -1.23
LRCH3-214ENST00000473177 ZMYM4Q5VZL5 1548 aa7.36□□□□□ -1.23
LRCH3-214ENST00000473177 ARHGEF12Q9NZN5 1544 aa7.36□□□□□ -1.23
LRCH3-214ENST00000473177 STRCQ7RTU9 1775 aa7.36□□□□□ -1.23
LRCH3-214ENST00000473177 CENPBP07199 599 aaPredicted RBP7.35□□□□□ -1.23
LRCH3-214ENST00000473177 SLC4A3P48751 1232 aa7.35□□□□□ -1.23
LRCH3-214ENST00000473177 RSPH4AQ5TD94 716 aa7.35□□□□□ -1.23
LRCH3-214ENST00000473177 SAMD7Q7Z3H4 446 aa7.35□□□□□ -1.23
LRCH3-214ENST00000473177 SLF2Q8IX21 1173 aa7.35□□□□□ -1.23
LRCH3-214ENST00000473177 RICTORQ6R327 1708 aa7.35□□□□□ -1.23
LRCH3-214ENST00000473177 C9orf84Q5VXU9 1444 aa7.35□□□□□ -1.23
LRCH3-214ENST00000473177 PIP4K2BP78356 416 aa7.34□□□□□ -1.23
LRCH3-214ENST00000473177 DIXDC1Q155Q3 683 aa7.34□□□□□ -1.23
LRCH3-214ENST00000473177 SH3D19Q5HYK7 790 aa7.34□□□□□ -1.23
LRCH3-214ENST00000473177 RSPH6AQ9H0K4 717 aa7.34□□□□□ -1.23
LRCH3-214ENST00000473177 ZNF335Q9H4Z2 1342 aaPredicted RBP7.33□□□□□ -1.24
LRCH3-214ENST00000473177 SLC10A3P09131 477 aa7.33□□□□□ -1.24
LRCH3-214ENST00000473177 HSPA1LP34931 641 aa7.33□□□□□ -1.24
LRCH3-214ENST00000473177 KCTD12Q96CX2 325 aaKnown RBP7.33□□□□□ -1.24
LRCH3-214ENST00000473177 NCOA1Q15788 1441 aa7.33□□□□□ -1.24
LRCH3-214ENST00000473177 SIGLEC1Q9BZZ2 1709 aa7.32□□□□□ -1.24
LRCH3-214ENST00000473177 CTTNBP2Q8WZ74 1663 aa7.32□□□□□ -1.24
LRCH3-214ENST00000473177 ATP10AO60312 1499 aa7.32□□□□□ -1.24
LRCH3-214ENST00000473177 HECW1Q76N89 1606 aa7.32□□□□□ -1.24
LRCH3-214ENST00000473177 GCGRP47871 477 aa7.32□□□□□ -1.24
LRCH3-214ENST00000473177 RDH13Q8NBN7 331 aa7.32□□□□□ -1.24
LRCH3-214ENST00000473177 ANKK1Q8NFD2 765 aa7.32□□□□□ -1.24
LRCH3-214ENST00000473177 LRCH3Q96II8 777 aa7.32□□□□□ -1.24
LRCH3-214ENST00000473177 TBC1D2Q9BYX2 928 aa7.32□□□□□ -1.24
LRCH3-214ENST00000473177 PLEKHD1A6NEE1 506 aa7.31□□□□□ -1.24
LRCH3-214ENST00000473177 GOLGA8CPA6NN73 597 aa7.31□□□□□ -1.24
LRCH3-214ENST00000473177 PPARGC1BQ86YN6 1023 aaKnown RBP7.31□□□□□ -1.24
LRCH3-214ENST00000473177 NECTIN2Q92692 538 aa7.31□□□□□ -1.24
LRCH3-214ENST00000473177 SCAPERQ9BY12 1400 aa7.31□□□□□ -1.24
LRCH3-214ENST00000473177 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.31□□□□□ -1.24
LRCH3-214ENST00000473177 GTF3C3Q9Y5Q9 886 aa7.31□□□□□ -1.24
LRCH3-214ENST00000473177 SOWAHBA6NEL2 793 aa7.3□□□□□ -1.24
LRCH3-214ENST00000473177 TOM1O60784 492 aa7.3□□□□□ -1.24
LRCH3-214ENST00000473177 SKIV2LQ15477 1246 aaKnown RBP7.3□□□□□ -1.24
LRCH3-214ENST00000473177 MYSM1Q5VVJ2 828 aa7.3□□□□□ -1.24
LRCH3-214ENST00000473177 SPIRE2Q8WWL2 714 aa7.3□□□□□ -1.24
LRCH3-214ENST00000473177 TRAPPC8Q9Y2L5 1435 aa7.29□□□□□ -1.24
LRCH3-214ENST00000473177 KDM4AO75164 1064 aa7.29□□□□□ -1.24
LRCH3-214ENST00000473177 USP46P62068 366 aa7.29□□□□□ -1.24
LRCH3-214ENST00000473177 NUTM1Q86Y26 1132 aa7.29□□□□□ -1.24
LRCH3-214ENST00000473177 RAPGEF6Q8TEU7 1601 aa7.29□□□□□ -1.24
LRCH3-214ENST00000473177 CAMSAP1Q5T5Y3 1602 aa7.28□□□□□ -1.24
LRCH3-214ENST00000473177 LOC105371045A0A1W2PR82 267 aa7.28□□□□□ -1.24
LRCH3-214ENST00000473177 RNF40O75150 1001 aa7.28□□□□□ -1.24
LRCH3-214ENST00000473177 GJA5P36382 358 aa7.28□□□□□ -1.24
LRCH3-214ENST00000473177 WNT2BQ93097 391 aa7.28□□□□□ -1.24
LRCH3-214ENST00000473177 PCMTD1Q96MG8 357 aaPredicted RBP7.28□□□□□ -1.24
LRCH3-214ENST00000473177 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.27□□□□□ -1.25
LRCH3-214ENST00000473177 CFHP08603 1231 aa7.27□□□□□ -1.25
LRCH3-214ENST00000473177 NUP153P49790 1475 aaKnown RBP7.26□□□□□ -1.25
LRCH3-214ENST00000473177 SPTLC1O15269 473 aa7.26□□□□□ -1.25
LRCH3-214ENST00000473177 CLK2P49760 499 aaKnown RBP7.26□□□□□ -1.25
LRCH3-214ENST00000473177 BCAMP50895 628 aa7.26□□□□□ -1.25
LRCH3-214ENST00000473177 TUSC1Q2TAM9 212 aa7.26□□□□□ -1.25
LRCH3-214ENST00000473177 POLR3EQ9NVU0 708 aa7.26□□□□□ -1.25
LRCH3-214ENST00000473177 TSR3Q9UJK0 312 aaKnown RBP7.26□□□□□ -1.25
LRCH3-214ENST00000473177 ZNF518AQ6AHZ1 1483 aa7.25□□□□□ -1.25
LRCH3-214ENST00000473177 MOXD2PA6NHM9 499 aa7.25□□□□□ -1.25
LRCH3-214ENST00000473177 HOXA2O43364 376 aa7.25□□□□□ -1.25
LRCH3-214ENST00000473177 PPP4CP60510 307 aa7.25□□□□□ -1.25
LRCH3-214ENST00000473177 KMT5BQ4FZB7 885 aa7.25□□□□□ -1.25
LRCH3-214ENST00000473177 RSBN1LQ6PCB5 846 aaPredicted RBP7.25□□□□□ -1.25
LRCH3-214ENST00000473177 RIC3Q7Z5B4 369 aa7.25□□□□□ -1.25
LRCH3-214ENST00000473177 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.25□□□□□ -1.25
LRCH3-214ENST00000473177 PRR14Q9BWN1 585 aa7.25□□□□□ -1.25
LRCH3-214ENST00000473177 CNTLNQ9NXG0 1405 aa7.25□□□□□ -1.25
LRCH3-214ENST00000473177 PTPN5P54829 565 aa7.24□□□□□ -1.25
LRCH3-214ENST00000473177 EFCAB2Q5VUJ9 269 aa7.24□□□□□ -1.25
LRCH3-214ENST00000473177 THSD4Q6ZMP0 1018 aa7.24□□□□□ -1.25
LRCH3-214ENST00000473177 PROCA1Q8NCQ7 364 aaPredicted RBP7.24□□□□□ -1.25
LRCH3-214ENST00000473177 LIMD1Q9UGP4 676 aa7.24□□□□□ -1.25
LRCH3-214ENST00000473177 HPS5Q9UPZ3 1129 aa7.24□□□□□ -1.25
LRCH3-214ENST00000473177 C3P01024 1663 aa7.24□□□□□ -1.25
LRCH3-214ENST00000473177 ACTN4O43707 911 aaKnown RBP7.23□□□□□ -1.25
LRCH3-214ENST00000473177 RANGAP1P46060 587 aaPredicted RBP7.23□□□□□ -1.25
LRCH3-214ENST00000473177 FUT2Q10981 343 aa7.23□□□□□ -1.25
LRCH3-214ENST00000473177 GRIPAP1Q4V328 841 aa7.23□□□□□ -1.25
LRCH3-214ENST00000473177 PLCH2O75038 1416 aa7.23□□□□□ -1.25
LRCH3-214ENST00000473177 NPATQ14207 1427 aa7.23□□□□□ -1.25
LRCH3-214ENST00000473177 PLA2R1Q13018 1463 aa7.23□□□□□ -1.25
LRCH3-214ENST00000473177 PTPRKQ15262 1439 aa7.22□□□□□ -1.25
LRCH3-214ENST00000473177 NDUFV2P19404 249 aa7.22□□□□□ -1.25
LRCH3-214ENST00000473177 ATP6V1AP38606 617 aa7.22□□□□□ -1.25
LRCH3-214ENST00000473177 ACIN1Q9UKV3 1341 aaKnown RBP7.22□□□□□ -1.25
LRCH3-214ENST00000473177 CPS1P31327 1500 aa7.22□□□□□ -1.25
LRCH3-214ENST00000473177 DIP2CQ9Y2E4 1556 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms