RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 ESCO1Q5FWF5 840 aa36.91■■■■□ 3.5
HOXB3-207ENST00000472863 NRKQ7Z2Y5 1582 aa36.9■■■■□ 3.5
HOXB3-207ENST00000472863 SSH2Q76I76 1423 aa36.9■■■■□ 3.5
HOXB3-207ENST00000472863 NCOA3Q9Y6Q9 1424 aa36.89■■■■□ 3.5
HOXB3-207ENST00000472863 DMRT2Q9Y5R5 561 aa36.88■■■■□ 3.49
HOXB3-207ENST00000472863 ORAI2Q96SN7 254 aa36.87■■■■□ 3.49
HOXB3-207ENST00000472863 FBLN1P23142 703 aa36.85■■■■□ 3.49
HOXB3-207ENST00000472863 COG3Q96JB2 828 aa36.85■■■■□ 3.49
HOXB3-207ENST00000472863 ATF3P18847 181 aa36.84■■■■□ 3.49
HOXB3-207ENST00000472863 ADAMTS8Q9UP79 889 aa36.84■■■■□ 3.49
HOXB3-207ENST00000472863 LRRC7Q96NW7 1537 aa36.81■■■■□ 3.48
HOXB3-207ENST00000472863 SENP3-EIF4A1A0A087X0R7 540 aa36.81■■■■□ 3.48
HOXB3-207ENST00000472863 XIRP1Q702N8 1843 aaKnown RBP36.81■■■■□ 3.48
HOXB3-207ENST00000472863 WDR43Q15061 677 aaKnown RBP eCLIP36.81■■■■□ 3.484e-9■■□□□ 12.8
HOXB3-207ENST00000472863 TTC21AQ8NDW8 1320 aa36.79■■■■□ 3.48
HOXB3-207ENST00000472863 C1orf167Q5SNV9 1468 aa36.79■■■■□ 3.48
HOXB3-207ENST00000472863 DCCP43146 1447 aa36.77■■■■□ 3.48
HOXB3-207ENST00000472863 MSH6P52701 1360 aa36.76■■■■□ 3.48
HOXB3-207ENST00000472863 SCAF1Q9H7N4 1312 aaKnown RBP36.76■■■■□ 3.48
HOXB3-207ENST00000472863 CFAP53Q96M91 514 aa36.75■■■■□ 3.47
HOXB3-207ENST00000472863 MST1RQ04912 1400 aa36.75■■■■□ 3.47
HOXB3-207ENST00000472863 CADPS2Q86UW7 1296 aa36.75■■■■□ 3.47
HOXB3-207ENST00000472863 POLKQ9UBT6 870 aa36.75■■■■□ 3.47
HOXB3-207ENST00000472863 FOXO3O43524 673 aa36.74■■■■□ 3.47
HOXB3-207ENST00000472863 PSME1Q06323 249 aa36.74■■■■□ 3.47
HOXB3-207ENST00000472863 OVOS2A0A0J9YW53 1432 aa36.73■■■■□ 3.47
HOXB3-207ENST00000472863 OVOS2Q6IE36 1432 aa36.73■■■■□ 3.47
HOXB3-207ENST00000472863 PAK3O75914 559 aaPredicted RBP36.73■■■■□ 3.47
HOXB3-207ENST00000472863 MAP2P11137 1827 aaKnown RBP36.71■■■■□ 3.47
HOXB3-207ENST00000472863 ZBED9Q6R2W3 1325 aa36.69■■■■□ 3.46
HOXB3-207ENST00000472863 INSRP06213 1382 aa36.69■■■■□ 3.46
HOXB3-207ENST00000472863 PPM1GO15355 546 aaPredicted RBP36.69■■■■□ 3.46
HOXB3-207ENST00000472863 AATKQ6ZMQ8 1374 aa36.68■■■■□ 3.46
HOXB3-207ENST00000472863 BLMP54132 1417 aaPredicted RBP36.68■■■■□ 3.46
HOXB3-207ENST00000472863 EMILIN1Q9Y6C2 1016 aa36.68■■■■□ 3.46
HOXB3-207ENST00000472863 XPCQ01831 940 aaPredicted RBP36.67■■■■□ 3.46
HOXB3-207ENST00000472863 PIK3C2AO00443 1686 aa36.67■■■■□ 3.46
HOXB3-207ENST00000472863 SHPRHQ149N8 1683 aa36.67■■■■□ 3.46
HOXB3-207ENST00000472863 RRS1Q15050 365 aaKnown RBP36.67■■■■□ 3.46
HOXB3-207ENST00000472863 NUTM2GQ5VZR2 741 aa36.67■■■■□ 3.46
HOXB3-207ENST00000472863 ABTB2Q8N961 1025 aa36.67■■■■□ 3.46
HOXB3-207ENST00000472863 NLRP6P59044 892 aa36.66■■■■□ 3.46
HOXB3-207ENST00000472863 USP31Q70CQ4 1352 aa36.66■■■■□ 3.46
HOXB3-207ENST00000472863 PNPLA6Q8IY17 1366 aa36.64■■■■□ 3.46
HOXB3-207ENST00000472863 COL3A1P02461 1466 aaPredicted RBP36.62■■■■□ 3.45
HOXB3-207ENST00000472863 SOX12O15370 315 aa36.62■■■■□ 3.45
HOXB3-207ENST00000472863 CCDC146Q8IYE0 955 aa36.61■■■■□ 3.45
HOXB3-207ENST00000472863 KIF1AQ12756 1690 aa36.6■■■■□ 3.45
HOXB3-207ENST00000472863 SALL2Q9Y467 1007 aaPredicted RBP36.6■■■■□ 3.45
HOXB3-207ENST00000472863 KRT28Q7Z3Y7 464 aa36.59■■■■□ 3.45
HOXB3-207ENST00000472863 DDX17Q92841 729 aaKnown RBP36.58■■■■□ 3.45
HOXB3-207ENST00000472863 SMG6Q86US8 1419 aaKnown RBP36.57■■■■□ 3.44
HOXB3-207ENST00000472863 DIAPH1O60610 1272 aaKnown RBP36.57■■■■□ 3.44
HOXB3-207ENST00000472863 U2AF1L5P0DN76 240 aaPredicted RBP36.54■■■■□ 3.44
HOXB3-207ENST00000472863 U2AF1Q01081 240 aaKnown RBP eCLIP36.54■■■■□ 3.444e-6■■■■□ 20.8
HOXB3-207ENST00000472863 SLAIN2Q9P270 581 aa36.54■■■■□ 3.44
HOXB3-207ENST00000472863 MARF1Q9Y4F3 1742 aaKnown RBP36.54■■■■□ 3.44
HOXB3-207ENST00000472863 NUDCQ9Y266 331 aa36.53■■■■□ 3.44
HOXB3-207ENST00000472863 U2SURPO15042 1029 aaKnown RBP36.53■■■■□ 3.44
HOXB3-207ENST00000472863 CDK12Q9NYV4 1490 aaPredicted RBP36.51■■■■□ 3.44
HOXB3-207ENST00000472863 BRINP3Q76B58 766 aa36.5■■■■□ 3.43
HOXB3-207ENST00000472863 USP54Q70EL1 1684 aa36.49■■■■□ 3.43
HOXB3-207ENST00000472863 TRPM3Q9HCF6 1732 aaPredicted RBP36.49■■■■□ 3.43
HOXB3-207ENST00000472863 MAP3K19Q56UN5 1328 aa36.48■■■■□ 3.43
HOXB3-207ENST00000472863 LMOD2Q6P5Q4 547 aa36.48■■■■□ 3.43
HOXB3-207ENST00000472863 APAF1O14727 1248 aa36.47■■■■□ 3.43
HOXB3-207ENST00000472863 NPHP3Q7Z494 1330 aa36.46■■■■□ 3.43
HOXB3-207ENST00000472863 IL13P35225 146 aa36.45■■■■□ 3.43
HOXB3-207ENST00000472863 PEAK1Q9H792 1746 aa36.44■■■■□ 3.42
HOXB3-207ENST00000472863 LTBP4Q8N2S1 1624 aa36.43■■■■□ 3.42
HOXB3-207ENST00000472863 RUNDC1Q96C34 613 aa36.43■■■■□ 3.42
HOXB3-207ENST00000472863 HSP90AB2PQ58FF8 381 aa36.42■■■■□ 3.42
HOXB3-207ENST00000472863 PLEKHG5O94827 1062 aa36.42■■■■□ 3.42
HOXB3-207ENST00000472863 AMPHP49418 695 aa36.38■■■■□ 3.41
HOXB3-207ENST00000472863 SBNO1A3KN83 1393 aa36.37■■■■□ 3.41
HOXB3-207ENST00000472863 EIF4A2Q14240 407 aaKnown RBP36.37■■■■□ 3.41
HOXB3-207ENST00000472863 AEBP2Q6ZN18 517 aaPredicted RBP36.36■■■■□ 3.41
HOXB3-207ENST00000472863 PXDNQ92626 1479 aa36.36■■■■□ 3.41
HOXB3-207ENST00000472863 PLEKHF1Q96S99 279 aa36.36■■■■□ 3.41
HOXB3-207ENST00000472863 ALS2Q96Q42 1657 aa36.35■■■■□ 3.41
HOXB3-207ENST00000472863 TCP11L2Q8N4U5 519 aa36.35■■■■□ 3.41
HOXB3-207ENST00000472863 KCNH5Q8NCM2 988 aa36.34■■■■□ 3.41
HOXB3-207ENST00000472863 FLT4P35916 1363 aa36.34■■■■□ 3.41
HOXB3-207ENST00000472863 GCP02774 474 aa36.33■■■■□ 3.41
HOXB3-207ENST00000472863 HMOX1P09601 288 aa36.32■■■■□ 3.41
HOXB3-207ENST00000472863 NFAT5O94916 1531 aa36.32■■■■□ 3.4
HOXB3-207ENST00000472863 FCHSD2O94868 740 aa36.32■■■■□ 3.4
HOXB3-207ENST00000472863 USP19O94966 1318 aa36.31■■■■□ 3.4
HOXB3-207ENST00000472863 CDCA7LQ96GN5 454 aa36.31■■■■□ 3.4
HOXB3-207ENST00000472863 RRP7AQ9Y3A4 280 aaKnown RBP36.31■■■■□ 3.4
HOXB3-207ENST00000472863 HOXC9P31274 260 aa36.3■■■■□ 3.4
HOXB3-207ENST00000472863 SPATA31A3Q5VYP0 1347 aa36.3■■■■□ 3.4
HOXB3-207ENST00000472863 NEUROD2Q15784 382 aa36.3■■■■□ 3.4
HOXB3-207ENST00000472863 RSPH6AQ9H0K4 717 aa36.3■■■■□ 3.4
HOXB3-207ENST00000472863 ZNF521Q96K83 1311 aa36.28■■■■□ 3.4
HOXB3-207ENST00000472863 PDE3BQ13370 1112 aa36.28■■■■□ 3.4
HOXB3-207ENST00000472863 SLIT3O75094 1523 aa36.28■■■■□ 3.4
HOXB3-207ENST00000472863 IQSEC2Q5JU85 1478 aa36.28■■■■□ 3.4
HOXB3-207ENST00000472863 TNS3Q68CZ2 1445 aa36.28■■■■□ 3.4
HOXB3-207ENST00000472863 KIF24Q5T7B8 1368 aa36.27■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms