RNA–Protein interactions for RNA: ENST00000471294.1

HDLBP-234, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-234ENST00000471294 SOS2Q07890 1332 aaPredicted RBP16.46■□□□□ 0.23
HDLBP-234ENST00000471294 FOXO3O43524 673 aa16.46■□□□□ 0.23
HDLBP-234ENST00000471294 RALBP1Q15311 655 aa16.46■□□□□ 0.23
HDLBP-234ENST00000471294 USP31Q70CQ4 1352 aa16.46■□□□□ 0.23
HDLBP-234ENST00000471294 USP54Q70EL1 1684 aa16.46■□□□□ 0.23
HDLBP-234ENST00000471294 TRPM3Q9HCF6 1732 aaPredicted RBP16.45■□□□□ 0.22
HDLBP-234ENST00000471294 PXDNQ92626 1479 aa16.45■□□□□ 0.22
HDLBP-234ENST00000471294 ROBO1Q9Y6N7 1651 aa16.45■□□□□ 0.22
HDLBP-234ENST00000471294 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
HDLBP-234ENST00000471294 PARD3Q8TEW0 1356 aa16.44■□□□□ 0.22
HDLBP-234ENST00000471294 FYB1O15117 783 aa16.44■□□□□ 0.22
HDLBP-234ENST00000471294 ANP32CO43423 234 aa16.44■□□□□ 0.22
HDLBP-234ENST00000471294 KRT28Q7Z3Y7 464 aa16.44■□□□□ 0.22
HDLBP-234ENST00000471294 KIF20BQ96Q89 1820 aa16.44■□□□□ 0.22
HDLBP-234ENST00000471294 ANKRD26Q9UPS8 1709 aa16.44■□□□□ 0.22
HDLBP-234ENST00000471294 UBAP1LF5GYI3 381 aa16.42■□□□□ 0.22
HDLBP-234ENST00000471294 PRKRIP1Q9H875 184 aaPredicted RBP16.42■□□□□ 0.22
HDLBP-234ENST00000471294 ARHGEF10O15013 1369 aa16.41■□□□□ 0.22
HDLBP-234ENST00000471294 ALS2Q96Q42 1657 aa16.41■□□□□ 0.22
HDLBP-234ENST00000471294 OVOS2A0A0J9YW53 1432 aa16.41■□□□□ 0.22
HDLBP-234ENST00000471294 OVOS2Q6IE36 1432 aa16.41■□□□□ 0.22
HDLBP-234ENST00000471294 TNS3Q68CZ2 1445 aa16.4■□□□□ 0.22
HDLBP-234ENST00000471294 SPATA31A3Q5VYP0 1347 aa16.4■□□□□ 0.22
HDLBP-234ENST00000471294 PIK3C2AO00443 1686 aa16.4■□□□□ 0.22
HDLBP-234ENST00000471294 COG3Q96JB2 828 aa16.39■□□□□ 0.21
HDLBP-234ENST00000471294 AATKQ6ZMQ8 1374 aa16.38■□□□□ 0.21
HDLBP-234ENST00000471294 NLRP13Q86W25 1043 aa16.38■□□□□ 0.21
HDLBP-234ENST00000471294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.38■□□□□ 0.212e-6■□□□□ 8.9
HDLBP-234ENST00000471294 MED1Q15648 1581 aaPredicted RBP16.38■□□□□ 0.21
HDLBP-234ENST00000471294 NME9Q86XW9 330 aa16.37■□□□□ 0.21
HDLBP-234ENST00000471294 ABTB2Q8N961 1025 aa16.37■□□□□ 0.21
HDLBP-234ENST00000471294 LRRC59Q96AG4 307 aaKnown RBP16.37■□□□□ 0.21
HDLBP-234ENST00000471294 CC2D1BQ5T0F9 858 aaKnown RBP16.36■□□□□ 0.21
HDLBP-234ENST00000471294 MORC1Q86VD1 984 aa16.36■□□□□ 0.21
HDLBP-234ENST00000471294 USP19O94966 1318 aa16.36■□□□□ 0.21
HDLBP-234ENST00000471294 MYBBP1AQ9BQG0 1328 aaKnown RBP16.36■□□□□ 0.21
HDLBP-234ENST00000471294 PAK3O75914 559 aaPredicted RBP16.35■□□□□ 0.21
HDLBP-234ENST00000471294 GGNBP2Q9H3C7 697 aa16.35■□□□□ 0.21
HDLBP-234ENST00000471294 SLIT3O75094 1523 aa16.35■□□□□ 0.21
HDLBP-234ENST00000471294 CCER2I3L3R5 266 aa16.34■□□□□ 0.21
HDLBP-234ENST00000471294 NLRP6P59044 892 aa16.34■□□□□ 0.21
HDLBP-234ENST00000471294 KCNH5Q8NCM2 988 aa16.34■□□□□ 0.21
HDLBP-234ENST00000471294 KIF24Q5T7B8 1368 aa16.34■□□□□ 0.21
HDLBP-234ENST00000471294 COL16A1Q07092 1604 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-234ENST00000471294 PHLPP1O60346 1717 aa16.33■□□□□ 0.21
HDLBP-234ENST00000471294 MARF1Q9Y4F3 1742 aaKnown RBP16.33■□□□□ 0.21
HDLBP-234ENST00000471294 PIP4K2BP78356 416 aa16.32■□□□□ 0.2
HDLBP-234ENST00000471294 XPCQ01831 940 aaPredicted RBP16.32■□□□□ 0.2
HDLBP-234ENST00000471294 SMG6Q86US8 1419 aaKnown RBP16.32■□□□□ 0.2
HDLBP-234ENST00000471294 COL22A1Q8NFW1 1626 aaPredicted RBP16.32■□□□□ 0.2
HDLBP-234ENST00000471294 DDX17Q92841 729 aaKnown RBP16.32■□□□□ 0.2
HDLBP-234ENST00000471294 INSRP06213 1382 aa16.3■□□□□ 0.2
HDLBP-234ENST00000471294 PPP2R1AP30153 589 aa16.3■□□□□ 0.2
HDLBP-234ENST00000471294 CRYBG1Q9Y4K1 1723 aa16.3■□□□□ 0.2
HDLBP-234ENST00000471294 PHRF1Q9P1Y6 1649 aaKnown RBP16.29■□□□□ 0.2
HDLBP-234ENST00000471294 NFAT5O94916 1531 aa16.29■□□□□ 0.2
HDLBP-234ENST00000471294 ABCC6O95255 1503 aa16.29■□□□□ 0.2
HDLBP-234ENST00000471294 GCP02774 474 aa16.28■□□□□ 0.2
HDLBP-234ENST00000471294 ZRANB1Q9UGI0 708 aa16.28■□□□□ 0.2
HDLBP-234ENST00000471294 RTL1A6NKG5 1358 aa16.27■□□□□ 0.2
HDLBP-234ENST00000471294 CPDO75976 1380 aa16.27■□□□□ 0.2
HDLBP-234ENST00000471294 PNPLA6Q8IY17 1366 aa16.27■□□□□ 0.2
HDLBP-234ENST00000471294 MIER1Q8N108 512 aa16.27■□□□□ 0.2
HDLBP-234ENST00000471294 SHPRHQ149N8 1683 aa16.27■□□□□ 0.19
HDLBP-234ENST00000471294 JCADQ9P266 1359 aa16.26■□□□□ 0.19
HDLBP-234ENST00000471294 MAP2P11137 1827 aaKnown RBP16.26■□□□□ 0.19
HDLBP-234ENST00000471294 LMOD2Q6P5Q4 547 aa16.26■□□□□ 0.19
HDLBP-234ENST00000471294 CDK12Q9NYV4 1490 aaPredicted RBP16.25■□□□□ 0.19
HDLBP-234ENST00000471294 POLKQ9UBT6 870 aa16.25■□□□□ 0.19
HDLBP-234ENST00000471294 MTHFSP49914 203 aa16.24■□□□□ 0.19
HDLBP-234ENST00000471294 ARHGEF25Q86VW2 580 aa16.24■□□□□ 0.19
HDLBP-234ENST00000471294 ABCA3Q99758 1704 aa16.24■□□□□ 0.19
HDLBP-234ENST00000471294 NUTM2GQ5VZR2 741 aa16.23■□□□□ 0.19
HDLBP-234ENST00000471294 ILDR1Q86SU0 546 aaPredicted RBP16.23■□□□□ 0.19
HDLBP-234ENST00000471294 CFAP53Q96M91 514 aa16.23■□□□□ 0.19
HDLBP-234ENST00000471294 FLT4P35916 1363 aa16.23■□□□□ 0.19
HDLBP-234ENST00000471294 SPATA31A6Q5VVP1 1343 aa16.22■□□□□ 0.19
HDLBP-234ENST00000471294 FBXO41Q8TF61 875 aa16.22■□□□□ 0.19
HDLBP-234ENST00000471294 MAP3K19Q56UN5 1328 aa16.21■□□□□ 0.19
HDLBP-234ENST00000471294 BLMP54132 1417 aaPredicted RBP16.2■□□□□ 0.18
HDLBP-234ENST00000471294 TNNT2P45379 298 aaPredicted RBP16.2■□□□□ 0.18
HDLBP-234ENST00000471294 IP6K1Q92551 441 aa16.2■□□□□ 0.18
HDLBP-234ENST00000471294 LTN1O94822 1766 aa16.2■□□□□ 0.18
HDLBP-234ENST00000471294 COL3A1P02461 1466 aaPredicted RBP16.19■□□□□ 0.18
HDLBP-234ENST00000471294 CNGB1Q14028 1251 aaPredicted RBP16.19■□□□□ 0.18
HDLBP-234ENST00000471294 RRS1Q15050 365 aaKnown RBP16.19■□□□□ 0.18
HDLBP-234ENST00000471294 EMILIN1Q9Y6C2 1016 aa16.19■□□□□ 0.18
HDLBP-234ENST00000471294 HSPA1LP34931 641 aa16.18■□□□□ 0.18
HDLBP-234ENST00000471294 MRS2Q9HD23 443 aa16.18■□□□□ 0.18
HDLBP-234ENST00000471294 PEAK1Q9H792 1746 aa16.17■□□□□ 0.18
HDLBP-234ENST00000471294 HOXC9P31274 260 aa16.17■□□□□ 0.18
HDLBP-234ENST00000471294 AMPHP49418 695 aa16.17■□□□□ 0.18
HDLBP-234ENST00000471294 COL18A1P39060 1754 aa16.17■□□□□ 0.18
HDLBP-234ENST00000471294 HAP1P54257 671 aaPredicted RBP16.16■□□□□ 0.18
HDLBP-234ENST00000471294 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
HDLBP-234ENST00000471294 KIAA0232Q92628 1395 aa16.15■□□□□ 0.18
HDLBP-234ENST00000471294 DIAPH1O60610 1272 aaKnown RBP16.15■□□□□ 0.18
HDLBP-234ENST00000471294 FBLN1P23142 703 aa16.15■□□□□ 0.18
HDLBP-234ENST00000471294 CABLES1Q8TDN4 633 aa16.15■□□□□ 0.18
HDLBP-234ENST00000471294 PNISRQ8TF01 805 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms