RNA–Protein interactions for RNA: ENST00000470980.1

GREB1-208, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 3

Gene GREB1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-208ENST00000470980 SLC12A5Q9H2X9 1139 aa12.63□□□□□ -0.39
GREB1-208ENST00000470980 PXDNQ92626 1479 aa12.63□□□□□ -0.39
GREB1-208ENST00000470980 RGS12O14924 1447 aa12.62□□□□□ -0.39
GREB1-208ENST00000470980 ATAD2Q6PL18 1390 aa12.62□□□□□ -0.39
GREB1-208ENST00000470980 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
GREB1-208ENST00000470980 QTRT2Q9H974 415 aaKnown RBP12.62□□□□□ -0.39
GREB1-208ENST00000470980 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
GREB1-208ENST00000470980 PARD3Q8TEW0 1356 aa12.61□□□□□ -0.39
GREB1-208ENST00000470980 C8orf37Q96NL8 207 aa12.61□□□□□ -0.39
GREB1-208ENST00000470980 NPHP3Q7Z494 1330 aa12.61□□□□□ -0.39
GREB1-208ENST00000470980 NINLQ9Y2I6 1382 aa12.6□□□□□ -0.39
GREB1-208ENST00000470980 AMER1Q5JTC6 1135 aaPredicted RBP12.6□□□□□ -0.39
GREB1-208ENST00000470980 CARD14Q9BXL6 1004 aa12.6□□□□□ -0.39
GREB1-208ENST00000470980 WASLO00401 505 aaPredicted RBP12.59□□□□□ -0.39
GREB1-208ENST00000470980 ANKRD36BQ8N2N9 1353 aa12.58□□□□□ -0.4
GREB1-208ENST00000470980 NPC1L1Q9UHC9 1359 aa12.58□□□□□ -0.4
GREB1-208ENST00000470980 ATRNO75882 1429 aa12.58□□□□□ -0.4
GREB1-208ENST00000470980 NLRP13Q86W25 1043 aa12.58□□□□□ -0.4
GREB1-208ENST00000470980 NGLY1Q96IV0 654 aa12.58□□□□□ -0.4
GREB1-208ENST00000470980 NSD3Q9BZ95 1437 aa12.58□□□□□ -0.4
GREB1-208ENST00000470980 TERF2IPQ9NYB0 399 aa12.58□□□□□ -0.4
GREB1-208ENST00000470980 BRD4O60885 1362 aaPredicted RBP12.57□□□□□ -0.4
GREB1-208ENST00000470980 FMN2Q9NZ56 1722 aa12.57□□□□□ -0.4
GREB1-208ENST00000470980 FAM9BQ8IZU0 186 aa12.57□□□□□ -0.4
GREB1-208ENST00000470980 BCL9LQ86UU0 1499 aa12.57□□□□□ -0.4
GREB1-208ENST00000470980 ADAMTS2O95450 1211 aa12.56□□□□□ -0.4
GREB1-208ENST00000470980 ESCO1Q5FWF5 840 aa12.56□□□□□ -0.4
GREB1-208ENST00000470980 HDGFL2Q7Z4V5 671 aaPredicted RBP12.56□□□□□ -0.4
GREB1-208ENST00000470980 CABP1Q9NZU7 370 aa12.56□□□□□ -0.4
GREB1-208ENST00000470980 USP21Q9UK80 565 aa12.56□□□□□ -0.4
GREB1-208ENST00000470980 TRPC5Q9UL62 973 aaPredicted RBP12.56□□□□□ -0.4
GREB1-208ENST00000470980 MARF1Q9Y4F3 1742 aaKnown RBP12.56□□□□□ -0.4
GREB1-208ENST00000470980 KIF1AQ12756 1690 aa12.55□□□□□ -0.4
GREB1-208ENST00000470980 NUDT16Q96DE0 195 aaKnown RBP12.55□□□□□ -0.4
GREB1-208ENST00000470980 CGNL1Q0VF96 1302 aa12.55□□□□□ -0.4
GREB1-208ENST00000470980 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.54□□□□□ -0.4
GREB1-208ENST00000470980 FOXO3O43524 673 aa12.54□□□□□ -0.4
GREB1-208ENST00000470980 ADGRB2O60241 1585 aa12.54□□□□□ -0.4
GREB1-208ENST00000470980 A0A1W2PP64 1363 aa12.54□□□□□ -0.4
GREB1-208ENST00000470980 SLIT2O94813 1529 aa12.53□□□□□ -0.4
GREB1-208ENST00000470980 PPP2R1AP30153 589 aa12.53□□□□□ -0.4
GREB1-208ENST00000470980 MORC1Q86VD1 984 aa12.53□□□□□ -0.4
GREB1-208ENST00000470980 SPATA31A3Q5VYP0 1347 aa12.53□□□□□ -0.4
GREB1-208ENST00000470980 PPIP5K1Q6PFW1 1433 aa12.53□□□□□ -0.4
GREB1-208ENST00000470980 USP32Q8NFA0 1604 aa12.52□□□□□ -0.4
GREB1-208ENST00000470980 HNRNPUQ00839 825 aaKnown RBP eCLIP12.52□□□□□ -0.412e-8■□□□□ 10.9
GREB1-208ENST00000470980 PNISRQ8TF01 805 aaKnown RBP12.52□□□□□ -0.41
GREB1-208ENST00000470980 CCDC61Q9Y6R9 512 aa12.52□□□□□ -0.41
GREB1-208ENST00000470980 ATP7BP35670 1465 aa12.52□□□□□ -0.41
GREB1-208ENST00000470980 NSD2O96028 1365 aa12.51□□□□□ -0.41
GREB1-208ENST00000470980 CD163L1Q9NR16 1453 aa12.51□□□□□ -0.41
GREB1-208ENST00000470980 EP400Q96L91 3159 aa12.51□□□□□ -0.41
GREB1-208ENST00000470980 NUTM2FA1L443 756 aa12.5□□□□□ -0.41
GREB1-208ENST00000470980 GJD4Q96KN9 370 aaPredicted RBP12.5□□□□□ -0.41
GREB1-208ENST00000470980 PRR36Q9H6K5 1346 aa12.5□□□□□ -0.41
GREB1-208ENST00000470980 SBNO1A3KN83 1393 aa12.49□□□□□ -0.41
GREB1-208ENST00000470980 TNS3Q68CZ2 1445 aa12.48□□□□□ -0.41
GREB1-208ENST00000470980 ANKARQ7Z5J8 1434 aa12.48□□□□□ -0.41
GREB1-208ENST00000470980 TNNT2P45379 298 aaPredicted RBP12.48□□□□□ -0.41
GREB1-208ENST00000470980 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
GREB1-208ENST00000470980 KRT28Q7Z3Y7 464 aa12.48□□□□□ -0.41
GREB1-208ENST00000470980 CCDC125Q86Z20 511 aa12.48□□□□□ -0.41
GREB1-208ENST00000470980 GLI3P10071 1580 aa12.47□□□□□ -0.41
GREB1-208ENST00000470980 CPSF1Q10570 1443 aaKnown RBP12.47□□□□□ -0.41
GREB1-208ENST00000470980 MAPK8IP2Q13387 824 aaPredicted RBP12.47□□□□□ -0.41
GREB1-208ENST00000470980 UNC5CLQ8IV45 518 aa12.47□□□□□ -0.41
GREB1-208ENST00000470980 GGNBP2Q9H3C7 697 aa12.47□□□□□ -0.41
GREB1-208ENST00000470980 PHF8Q9UPP1 1060 aa12.47□□□□□ -0.41
GREB1-208ENST00000470980 RGPD8O14715 1765 aaPredicted RBP12.46□□□□□ -0.41
GREB1-208ENST00000470980 ONECUT3O60422 494 aaPredicted RBP12.46□□□□□ -0.41
GREB1-208ENST00000470980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.46□□□□□ -0.41
GREB1-208ENST00000470980 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
GREB1-208ENST00000470980 SRCAPQ6ZRS2 3230 aa12.45□□□□□ -0.42
GREB1-208ENST00000470980 PLEKHG3A1L390 1219 aa12.45□□□□□ -0.42
GREB1-208ENST00000470980 FYB1O15117 783 aa12.45□□□□□ -0.42
GREB1-208ENST00000470980 PSME1Q06323 249 aa12.45□□□□□ -0.42
GREB1-208ENST00000470980 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
GREB1-208ENST00000470980 ABCA3Q99758 1704 aa12.45□□□□□ -0.42
GREB1-208ENST00000470980 NWD2Q9ULI1 1742 aa12.45□□□□□ -0.42
GREB1-208ENST00000470980 TOPAZ1Q8N9V7 1692 aa12.45□□□□□ -0.42
GREB1-208ENST00000470980 ARHGEF10O15013 1369 aa12.44□□□□□ -0.42
GREB1-208ENST00000470980 ACEP12821 1306 aa12.44□□□□□ -0.42
GREB1-208ENST00000470980 WDR43Q15061 677 aaKnown RBP eCLIP12.44□□□□□ -0.42
GREB1-208ENST00000470980 ITSN1Q15811 1721 aa12.44□□□□□ -0.42
GREB1-208ENST00000470980 VPS72Q15906 364 aa12.43□□□□□ -0.42
GREB1-208ENST00000470980 KIF20BQ96Q89 1820 aa12.43□□□□□ -0.42
GREB1-208ENST00000470980 TRPM3Q9HCF6 1732 aaPredicted RBP12.42□□□□□ -0.42
GREB1-208ENST00000470980 PPP4R3CPQ6ZMV5 832 aa12.42□□□□□ -0.42
GREB1-208ENST00000470980 NGDNQ8NEJ9 315 aaKnown RBP12.42□□□□□ -0.42
GREB1-208ENST00000470980 PMFBP1Q8TBY8 1022 aa12.42□□□□□ -0.42
GREB1-208ENST00000470980 CFAP53Q96M91 514 aa12.42□□□□□ -0.42
GREB1-208ENST00000470980 AKAP12Q02952 1782 aa12.42□□□□□ -0.42
GREB1-208ENST00000470980 MON2Q7Z3U7 1717 aa12.42□□□□□ -0.42
GREB1-208ENST00000470980 PLCH1Q4KWH8 1693 aa12.42□□□□□ -0.42
GREB1-208ENST00000470980 MTHFSP49914 203 aa12.41□□□□□ -0.42
GREB1-208ENST00000470980 BLMP54132 1417 aaPredicted RBP12.41□□□□□ -0.42
GREB1-208ENST00000470980 NME9Q86XW9 330 aa12.41□□□□□ -0.42
GREB1-208ENST00000470980 ANKRD26Q9UPS8 1709 aa12.41□□□□□ -0.42
GREB1-208ENST00000470980 ALS2Q96Q42 1657 aa12.41□□□□□ -0.42
GREB1-208ENST00000470980 POLR3AO14802 1390 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms