RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 SKOR2Q2VWA4 1001 aaPredicted RBP17.21■□□□□ 0.35
NPHP4-207ENST00000470763 ITPRIPQ8IWB1 547 aa17.21■□□□□ 0.35
NPHP4-207ENST00000470763 KDM5AP29375 1690 aaKnown RBP17.2■□□□□ 0.34
NPHP4-207ENST00000470763 GGT6Q6P531 493 aa17.2■□□□□ 0.34
NPHP4-207ENST00000470763 ESF1Q9H501 851 aaKnown RBP17.2■□□□□ 0.34
NPHP4-207ENST00000470763 PREX1Q8TCU6 1659 aa17.2■□□□□ 0.34
NPHP4-207ENST00000470763 OFD1O75665 1012 aa17.2■□□□□ 0.34
NPHP4-207ENST00000470763 R3HCC1Q9Y3T6 440 aaKnown RBP17.2■□□□□ 0.34
NPHP4-207ENST00000470763 POLR3AO14802 1390 aaPredicted RBP17.19■□□□□ 0.34
NPHP4-207ENST00000470763 SSFA2P28290 1259 aa17.19■□□□□ 0.34
NPHP4-207ENST00000470763 ANP32BQ92688 251 aaKnown RBP17.19■□□□□ 0.34
NPHP4-207ENST00000470763 TSR2Q969E8 191 aaKnown RBP17.19■□□□□ 0.34
NPHP4-207ENST00000470763 CEP152O94986 1710 aa17.19■□□□□ 0.34
NPHP4-207ENST00000470763 RBM25P49756 843 aaKnown RBP17.19■□□□□ 0.34
NPHP4-207ENST00000470763 SNX21Q969T3 373 aa17.19■□□□□ 0.34
NPHP4-207ENST00000470763 SETD1BQ9UPS6 1966 aaKnown RBP17.19■□□□□ 0.34
NPHP4-207ENST00000470763 PPP1R9BQ96SB3 815 aa17.18■□□□□ 0.34
NPHP4-207ENST00000470763 CLTCQ00610 1675 aaKnown RBP17.18■□□□□ 0.34
NPHP4-207ENST00000470763 AK9Q5TCS8 1911 aa17.18■□□□□ 0.34
NPHP4-207ENST00000470763 LNPKQ9C0E8 428 aa17.18■□□□□ 0.34
NPHP4-207ENST00000470763 CIZ1Q9ULV3 898 aaPredicted RBP17.18■□□□□ 0.34
NPHP4-207ENST00000470763 MROH2AA6NES4 1674 aa17.18■□□□□ 0.34
NPHP4-207ENST00000470763 WDR63Q8IWG1 891 aa17.18■□□□□ 0.34
NPHP4-207ENST00000470763 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
NPHP4-207ENST00000470763 SMC4Q9NTJ3 1288 aa17.18■□□□□ 0.34
NPHP4-207ENST00000470763 DDX49Q9Y6V7 483 aaKnown RBP17.18■□□□□ 0.34
NPHP4-207ENST00000470763 MORC1Q86VD1 984 aa17.17■□□□□ 0.34
NPHP4-207ENST00000470763 MAST1Q9Y2H9 1570 aa17.17■□□□□ 0.34
NPHP4-207ENST00000470763 TRIM27P14373 513 aa17.17■□□□□ 0.34
NPHP4-207ENST00000470763 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.17■□□□□ 0.34
NPHP4-207ENST00000470763 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
NPHP4-207ENST00000470763 SHPRHQ149N8 1683 aa17.16■□□□□ 0.34
NPHP4-207ENST00000470763 PHF23Q9BUL5 403 aaPredicted RBP17.16■□□□□ 0.34
NPHP4-207ENST00000470763 KIF3BO15066 747 aa17.15■□□□□ 0.34
NPHP4-207ENST00000470763 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-207ENST00000470763 IQSEC2Q5JU85 1478 aa17.14■□□□□ 0.34
NPHP4-207ENST00000470763 NCLP19338 710 aaKnown RBP17.14■□□□□ 0.33
NPHP4-207ENST00000470763 KIF2CQ99661 725 aa17.14■□□□□ 0.33
NPHP4-207ENST00000470763 PRDM4Q9UKN5 801 aa17.14■□□□□ 0.33
NPHP4-207ENST00000470763 ERVK-7P63135 1459 aa17.14■□□□□ 0.33
NPHP4-207ENST00000470763 XPCQ01831 940 aaPredicted RBP17.14■□□□□ 0.33
NPHP4-207ENST00000470763 CFAP70Q5T0N1 1121 aa17.14■□□□□ 0.33
NPHP4-207ENST00000470763 GOLGA6L22H0YM25 854 aa17.13■□□□□ 0.33
NPHP4-207ENST00000470763 GAS2L2Q8NHY3 880 aa17.13■□□□□ 0.33
NPHP4-207ENST00000470763 PPP6R1Q9UPN7 881 aa17.13■□□□□ 0.33
NPHP4-207ENST00000470763 K7ELQ4 463 aaPredicted RBP17.12■□□□□ 0.33
NPHP4-207ENST00000470763 DDX19BQ9UMR2 479 aa17.12■□□□□ 0.33
NPHP4-207ENST00000470763 EXOSC9Q06265 439 aaKnown RBP17.12■□□□□ 0.33
NPHP4-207ENST00000470763 NPATQ14207 1427 aa17.12■□□□□ 0.33
NPHP4-207ENST00000470763 PTMSP20962 102 aa17.12■□□□□ 0.33
NPHP4-207ENST00000470763 MTHFSP49914 203 aa17.12■□□□□ 0.33
NPHP4-207ENST00000470763 SSH1Q8WYL5 1049 aa17.12■□□□□ 0.33
NPHP4-207ENST00000470763 SPHKAPQ2M3C7 1700 aa17.11■□□□□ 0.33
NPHP4-207ENST00000470763 TMEM57Q8N5G2 664 aa17.11■□□□□ 0.33
NPHP4-207ENST00000470763 NSD3Q9BZ95 1437 aa17.11■□□□□ 0.33
NPHP4-207ENST00000470763 UQCRHLA0A096LP55 91 aa17.11■□□□□ 0.33
NPHP4-207ENST00000470763 UQCRHP07919 91 aa17.11■□□□□ 0.33
NPHP4-207ENST00000470763 KLHL40Q2TBA0 621 aa17.11■□□□□ 0.33
NPHP4-207ENST00000470763 CAVIN1Q6NZI2 390 aaKnown RBP17.11■□□□□ 0.33
NPHP4-207ENST00000470763 BAG4O95429 457 aaKnown RBP17.1■□□□□ 0.33
NPHP4-207ENST00000470763 U2AF1L5P0DN76 240 aaPredicted RBP17.1■□□□□ 0.33
NPHP4-207ENST00000470763 U2AF1Q01081 240 aaKnown RBP eCLIP17.1■□□□□ 0.33
NPHP4-207ENST00000470763 NOB1Q9ULX3 412 aaKnown RBP17.1■□□□□ 0.33
NPHP4-207ENST00000470763 ATF7IPQ6VMQ6 1270 aa17.1■□□□□ 0.33
NPHP4-207ENST00000470763 STRCQ7RTU9 1775 aa17.09■□□□□ 0.33
NPHP4-207ENST00000470763 MCTP1Q6DN14 999 aa17.09■□□□□ 0.33
NPHP4-207ENST00000470763 NUCB1Q02818 461 aa17.08■□□□□ 0.33
NPHP4-207ENST00000470763 SLC12A5Q9H2X9 1139 aa17.08■□□□□ 0.32
NPHP4-207ENST00000470763 DUOX2Q9NRD8 1548 aa17.08■□□□□ 0.32
NPHP4-207ENST00000470763 CCDC27Q2M243 656 aa17.08■□□□□ 0.32
NPHP4-207ENST00000470763 CHD1LQ86WJ1 897 aa17.08■□□□□ 0.32
NPHP4-207ENST00000470763 A0A0U1RQG5 324 aaPredicted RBP17.07■□□□□ 0.32
NPHP4-207ENST00000470763 RBSNQ9H1K0 784 aa17.07■□□□□ 0.32
NPHP4-207ENST00000470763 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.07■□□□□ 0.32
NPHP4-207ENST00000470763 ZBTB40Q9NUA8 1239 aa17.07■□□□□ 0.32
NPHP4-207ENST00000470763 ZSCAN23Q3MJ62 389 aa17.06■□□□□ 0.32
NPHP4-207ENST00000470763 ILDR1Q86SU0 546 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-207ENST00000470763 PRDM10Q9NQV6 1147 aa17.06■□□□□ 0.32
NPHP4-207ENST00000470763 ZBTB7CA1YPR0 619 aa17.05■□□□□ 0.32
NPHP4-207ENST00000470763 TERF1P54274 439 aa17.05■□□□□ 0.32
NPHP4-207ENST00000470763 NOL7Q9UMY1 257 aaKnown RBP17.05■□□□□ 0.32
NPHP4-207ENST00000470763 KANK1Q14678 1352 aa17.05■□□□□ 0.32
NPHP4-207ENST00000470763 MROH1Q8NDA8 1641 aa17.05■□□□□ 0.32
NPHP4-207ENST00000470763 ANKRD45Q5TZF3 282 aa17.05■□□□□ 0.32
NPHP4-207ENST00000470763 TBC1D9Q6ZT07 1266 aa17.05■□□□□ 0.32
NPHP4-207ENST00000470763 FBXO31Q5XUX0 539 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-207ENST00000470763 CFAP53Q96M91 514 aa17.05■□□□□ 0.32
NPHP4-207ENST00000470763 IBTKQ9P2D0 1353 aaPredicted RBP17.04■□□□□ 0.32
NPHP4-207ENST00000470763 MYO3AQ8NEV4 1616 aa17.04■□□□□ 0.32
NPHP4-207ENST00000470763 CLTCL1P53675 1640 aa17.04■□□□□ 0.32
NPHP4-207ENST00000470763 PRIM1P49642 420 aaKnown RBP17.04■□□□□ 0.32
NPHP4-207ENST00000470763 PKP1Q13835 747 aa17.04■□□□□ 0.32
NPHP4-207ENST00000470763 BMP2KLQ5H9B9 411 aa17.04■□□□□ 0.32
NPHP4-207ENST00000470763 MAP7D2Q96T17 732 aa17.04■□□□□ 0.32
NPHP4-207ENST00000470763 ADGRF5Q8IZF2 1346 aa17.04■□□□□ 0.32
NPHP4-207ENST00000470763 RBM27Q9P2N5 1060 aaKnown RBP17.03■□□□□ 0.32
NPHP4-207ENST00000470763 ZNF445P59923 1031 aa17.03■□□□□ 0.32
NPHP4-207ENST00000470763 C1orf115Q9H7X2 142 aa17.03■□□□□ 0.32
NPHP4-207ENST00000470763 ZNF500O60304 480 aaPredicted RBP17.03■□□□□ 0.32
NPHP4-207ENST00000470763 ABCC3O15438 1527 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 380.5 ms