RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 NPHP3Q7Z494 1330 aa15.43■□□□□ 0.06
SREBF1-209ENST00000470247 PXDNQ92626 1479 aa15.42■□□□□ 0.06
SREBF1-209ENST00000470247 NME9Q86XW9 330 aa15.42■□□□□ 0.06
SREBF1-209ENST00000470247 ZRANB1Q9UGI0 708 aa15.42■□□□□ 0.06
SREBF1-209ENST00000470247 CGNL1Q0VF96 1302 aa15.42■□□□□ 0.06
SREBF1-209ENST00000470247 NRKQ7Z2Y5 1582 aa15.41■□□□□ 0.06
SREBF1-209ENST00000470247 TTC21AQ8NDW8 1320 aa15.41■□□□□ 0.06
SREBF1-209ENST00000470247 PIP4K2BP78356 416 aa15.4■□□□□ 0.06
SREBF1-209ENST00000470247 CC2D1BQ5T0F9 858 aaKnown RBP15.4■□□□□ 0.06
SREBF1-209ENST00000470247 ROBO1Q9Y6N7 1651 aa15.4■□□□□ 0.06
SREBF1-209ENST00000470247 SBNO1A3KN83 1393 aa15.39■□□□□ 0.05
SREBF1-209ENST00000470247 GGNBP2Q9H3C7 697 aa15.39■□□□□ 0.05
SREBF1-209ENST00000470247 PRKRIP1Q9H875 184 aaPredicted RBP15.39■□□□□ 0.05
SREBF1-209ENST00000470247 TRPM3Q9HCF6 1732 aaPredicted RBP15.39■□□□□ 0.05
SREBF1-209ENST00000470247 NHSL1Q5SYE7 1610 aa15.38■□□□□ 0.05
SREBF1-209ENST00000470247 SPATA31A3Q5VYP0 1347 aa15.38■□□□□ 0.05
SREBF1-209ENST00000470247 USP31Q70CQ4 1352 aa15.37■□□□□ 0.05
SREBF1-209ENST00000470247 AHDC1Q5TGY3 1603 aaPredicted RBP15.37■□□□□ 0.05
SREBF1-209ENST00000470247 PAK3O75914 559 aaPredicted RBP15.37■□□□□ 0.05
SREBF1-209ENST00000470247 NSD2O96028 1365 aa15.36■□□□□ 0.05
SREBF1-209ENST00000470247 PARD3Q8TEW0 1356 aa15.36■□□□□ 0.05
SREBF1-209ENST00000470247 CNGB1Q14028 1251 aaPredicted RBP15.36■□□□□ 0.05
SREBF1-209ENST00000470247 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
SREBF1-209ENST00000470247 OVOS2A0A0J9YW53 1432 aa15.35■□□□□ 0.05
SREBF1-209ENST00000470247 OVOS2Q6IE36 1432 aa15.35■□□□□ 0.05
SREBF1-209ENST00000470247 NUTM2GQ5VZR2 741 aa15.35■□□□□ 0.05
SREBF1-209ENST00000470247 ANP32CO43423 234 aa15.34■□□□□ 0.05
SREBF1-209ENST00000470247 NLRP6P59044 892 aa15.34■□□□□ 0.05
SREBF1-209ENST00000470247 RALBP1Q15311 655 aa15.34■□□□□ 0.05
SREBF1-209ENST00000470247 PIK3C2AO00443 1686 aa15.34■□□□□ 0.05
SREBF1-209ENST00000470247 TNS3Q68CZ2 1445 aa15.34■□□□□ 0.05
SREBF1-209ENST00000470247 ALS2Q96Q42 1657 aa15.33■□□□□ 0.04
SREBF1-209ENST00000470247 FBLN1P23142 703 aa15.33■□□□□ 0.04
SREBF1-209ENST00000470247 MORC1Q86VD1 984 aa15.33■□□□□ 0.04
SREBF1-209ENST00000470247 MIER1Q8N108 512 aa15.33■□□□□ 0.04
SREBF1-209ENST00000470247 SCAF1Q9H7N4 1312 aaKnown RBP15.33■□□□□ 0.04
SREBF1-209ENST00000470247 COG3Q96JB2 828 aa15.32■□□□□ 0.04
SREBF1-209ENST00000470247 NLRP13Q86W25 1043 aa15.31■□□□□ 0.04
SREBF1-209ENST00000470247 LRRC59Q96AG4 307 aaKnown RBP15.31■□□□□ 0.04
SREBF1-209ENST00000470247 USP19O94966 1318 aa15.31■□□□□ 0.04
SREBF1-209ENST00000470247 MARF1Q9Y4F3 1742 aaKnown RBP15.31■□□□□ 0.04
SREBF1-209ENST00000470247 KIF20BQ96Q89 1820 aa15.31■□□□□ 0.04
SREBF1-209ENST00000470247 PPP2R1AP30153 589 aa15.3■□□□□ 0.04
SREBF1-209ENST00000470247 COL16A1Q07092 1604 aaPredicted RBP15.3■□□□□ 0.04
SREBF1-209ENST00000470247 LMOD2Q6P5Q4 547 aa15.3■□□□□ 0.04
SREBF1-209ENST00000470247 USP54Q70EL1 1684 aa15.3■□□□□ 0.04
SREBF1-209ENST00000470247 ARHGEF10O15013 1369 aa15.29■□□□□ 0.04
SREBF1-209ENST00000470247 TNNT2P45379 298 aaPredicted RBP15.29■□□□□ 0.04
SREBF1-209ENST00000470247 ANKRD26Q9UPS8 1709 aa15.29■□□□□ 0.04
SREBF1-209ENST00000470247 AATKQ6ZMQ8 1374 aa15.28■□□□□ 0.04
SREBF1-209ENST00000470247 CCDC184Q52MB2 194 aa15.28■□□□□ 0.04
SREBF1-209ENST00000470247 CABLES1Q8TDN4 633 aa15.28■□□□□ 0.04
SREBF1-209ENST00000470247 MED1Q15648 1581 aaPredicted RBP15.28■□□□□ 0.04
SREBF1-209ENST00000470247 MYBBP1AQ9BQG0 1328 aaKnown RBP15.27■□□□□ 0.04
SREBF1-209ENST00000470247 PHLPP1O60346 1717 aa15.27■□□□□ 0.04
SREBF1-209ENST00000470247 GCP02774 474 aa15.27■□□□□ 0.04
SREBF1-209ENST00000470247 HSPA1LP34931 641 aa15.27■□□□□ 0.04
SREBF1-209ENST00000470247 POLKQ9UBT6 870 aa15.27■□□□□ 0.04
SREBF1-209ENST00000470247 SLIT3O75094 1523 aa15.27■□□□□ 0.03
SREBF1-209ENST00000470247 PNPLA6Q8IY17 1366 aa15.26■□□□□ 0.03
SREBF1-209ENST00000470247 MTHFSP49914 203 aa15.25■□□□□ 0.03
SREBF1-209ENST00000470247 RRS1Q15050 365 aaKnown RBP15.25■□□□□ 0.03
SREBF1-209ENST00000470247 NFAT5O94916 1531 aa15.24■□□□□ 0.03
SREBF1-209ENST00000470247 SOX12O15370 315 aa15.24■□□□□ 0.03
SREBF1-209ENST00000470247 KCNH5Q8NCM2 988 aa15.24■□□□□ 0.03
SREBF1-209ENST00000470247 EMILIN1Q9Y6C2 1016 aa15.24■□□□□ 0.03
SREBF1-209ENST00000470247 MAP3K19Q56UN5 1328 aa15.23■□□□□ 0.03
SREBF1-209ENST00000470247 PLEKHG5O94827 1062 aa15.23■□□□□ 0.03
SREBF1-209ENST00000470247 ARHGEF25Q86VW2 580 aa15.23■□□□□ 0.03
SREBF1-209ENST00000470247 CRYBG1Q9Y4K1 1723 aa15.23■□□□□ 0.03
SREBF1-209ENST00000470247 CCER2I3L3R5 266 aa15.22■□□□□ 0.03
SREBF1-209ENST00000470247 FBXO41Q8TF61 875 aa15.22■□□□□ 0.03
SREBF1-209ENST00000470247 SMG6Q86US8 1419 aaKnown RBP15.21■□□□□ 0.03
SREBF1-209ENST00000470247 INSRP06213 1382 aa15.21■□□□□ 0.02
SREBF1-209ENST00000470247 JCADQ9P266 1359 aa15.21■□□□□ 0.02
SREBF1-209ENST00000470247 COL22A1Q8NFW1 1626 aaPredicted RBP15.21■□□□□ 0.02
SREBF1-209ENST00000470247 ZC3H6P61129 1189 aaKnown RBP15.2■□□□□ 0.02
SREBF1-209ENST00000470247 MAP2P11137 1827 aaKnown RBP15.2■□□□□ 0.02
SREBF1-209ENST00000470247 PHRF1Q9P1Y6 1649 aaKnown RBP15.19■□□□□ 0.02
SREBF1-209ENST00000470247 CPDO75976 1380 aa15.19■□□□□ 0.02
SREBF1-209ENST00000470247 IP6K1Q92551 441 aa15.18■□□□□ 0.02
SREBF1-209ENST00000470247 PEAK1Q9H792 1746 aa15.17■□□□□ 0.02
SREBF1-209ENST00000470247 COL3A1P02461 1466 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-209ENST00000470247 KIF24Q5T7B8 1368 aa15.17■□□□□ 0.02
SREBF1-209ENST00000470247 KIAA0232Q92628 1395 aa15.17■□□□□ 0.02
SREBF1-209ENST00000470247 PPM1GO15355 546 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-209ENST00000470247 HOXC9P31274 260 aa15.17■□□□□ 0.02
SREBF1-209ENST00000470247 HSP90AB2PQ58FF8 381 aa15.17■□□□□ 0.02
SREBF1-209ENST00000470247 AXIN2Q9Y2T1 843 aa15.17■□□□□ 0.02
SREBF1-209ENST00000470247 ABCA3Q99758 1704 aa15.17■□□□□ 0.02
SREBF1-209ENST00000470247 SHPRHQ149N8 1683 aa15.16■□□□□ 0.02
SREBF1-209ENST00000470247 AMPHP49418 695 aa15.16■□□□□ 0.02
SREBF1-209ENST00000470247 MRS2Q9HD23 443 aa15.16■□□□□ 0.02
SREBF1-209ENST00000470247 CDK12Q9NYV4 1490 aaPredicted RBP15.15■□□□□ 0.02
SREBF1-209ENST00000470247 FLT4P35916 1363 aa15.15■□□□□ 0.02
SREBF1-209ENST00000470247 FAM83GA6ND36 823 aa15.15■□□□□ 0.02
SREBF1-209ENST00000470247 CHRNA2Q15822 529 aa15.15■□□□□ 0.02
SREBF1-209ENST00000470247 PNISRQ8TF01 805 aaKnown RBP15.15■□□□□ 0.02
SREBF1-209ENST00000470247 RTL1A6NKG5 1358 aa15.14■□□□□ 0.01
SREBF1-209ENST00000470247 COL18A1P39060 1754 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms