RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 ITSN1Q15811 1721 aa21.8■■□□□ 1.08
FDPS-208ENST00000470171 UNC5CLQ8IV45 518 aa21.8■■□□□ 1.08
FDPS-208ENST00000470171 CABP1Q9NZU7 370 aa21.8■■□□□ 1.08
FDPS-208ENST00000470171 NLRP13Q86W25 1043 aa21.78■■□□□ 1.08
FDPS-208ENST00000470171 ATRNO75882 1429 aa21.76■■□□□ 1.07
FDPS-208ENST00000470171 ABTB2Q8N961 1025 aa21.76■■□□□ 1.07
FDPS-208ENST00000470171 CCER1Q8TC90 406 aaPredicted RBP21.76■■□□□ 1.07
FDPS-208ENST00000470171 BCL9LQ86UU0 1499 aa21.76■■□□□ 1.07
FDPS-208ENST00000470171 SLIT2O94813 1529 aa21.75■■□□□ 1.07
FDPS-208ENST00000470171 CABLES1Q8TDN4 633 aa21.75■■□□□ 1.07
FDPS-208ENST00000470171 GJD4Q96KN9 370 aaPredicted RBP21.74■■□□□ 1.07
FDPS-208ENST00000470171 QRICH2Q9H0J4 1663 aa21.74■■□□□ 1.07
FDPS-208ENST00000470171 RGPD8O14715 1765 aaPredicted RBP21.74■■□□□ 1.07
FDPS-208ENST00000470171 VPS72Q15906 364 aa21.73■■□□□ 1.07
FDPS-208ENST00000470171 CDCA8Q53HL2 280 aa21.73■■□□□ 1.07
FDPS-208ENST00000470171 NINLQ9Y2I6 1382 aa21.73■■□□□ 1.07
FDPS-208ENST00000470171 TTC21AQ8NDW8 1320 aa21.72■■□□□ 1.07
FDPS-208ENST00000470171 TOPAZ1Q8N9V7 1692 aa21.72■■□□□ 1.07
FDPS-208ENST00000470171 TRPM3Q9HCF6 1732 aaPredicted RBP21.72■■□□□ 1.07
FDPS-208ENST00000470171 USP6P35125 1406 aa21.72■■□□□ 1.07
FDPS-208ENST00000470171 FAM83GA6ND36 823 aa21.71■■□□□ 1.07
FDPS-208ENST00000470171 ST20-MTHFSA0A0A6YYL1 179 aa21.7■■□□□ 1.06
FDPS-208ENST00000470171 PRDM11Q9NQV5 511 aa21.7■■□□□ 1.06
FDPS-208ENST00000470171 HDGFL2Q7Z4V5 671 aaPredicted RBP21.69■■□□□ 1.06
FDPS-208ENST00000470171 TERF2IPQ9NYB0 399 aa21.69■■□□□ 1.06
FDPS-208ENST00000470171 USP19O94966 1318 aa21.69■■□□□ 1.06
FDPS-208ENST00000470171 ALS2Q96Q42 1657 aa21.69■■□□□ 1.06
FDPS-208ENST00000470171 TMF1P82094 1093 aa21.68■■□□□ 1.06
FDPS-208ENST00000470171 TESK2Q96S53 571 aa21.68■■□□□ 1.06
FDPS-208ENST00000470171 CPSF1Q10570 1443 aaKnown RBP21.67■■□□□ 1.06
FDPS-208ENST00000470171 SSH2Q76I76 1423 aa21.67■■□□□ 1.06
FDPS-208ENST00000470171 CPDO75976 1380 aa21.67■■□□□ 1.06
FDPS-208ENST00000470171 ONECUT3O60422 494 aaPredicted RBP21.66■■□□□ 1.06
FDPS-208ENST00000470171 NLRP6P59044 892 aa21.66■■□□□ 1.06
FDPS-208ENST00000470171 KCNH5Q8NCM2 988 aa21.66■■□□□ 1.06
FDPS-208ENST00000470171 BTG4Q9NY30 223 aa21.66■■□□□ 1.06
FDPS-208ENST00000470171 USP47Q96K76 1375 aa21.65■■□□□ 1.06
FDPS-208ENST00000470171 GCP02774 474 aa21.65■■□□□ 1.06
FDPS-208ENST00000470171 KTN1Q86UP2 1357 aaKnown RBP21.64■■□□□ 1.06
FDPS-208ENST00000470171 TTC21BQ7Z4L5 1316 aa21.64■■□□□ 1.05
FDPS-208ENST00000470171 PLEKHG5O94827 1062 aa21.63■■□□□ 1.05
FDPS-208ENST00000470171 TMC1Q8TDI8 760 aa21.63■■□□□ 1.05
FDPS-208ENST00000470171 MARF1Q9Y4F3 1742 aaKnown RBP21.63■■□□□ 1.05
FDPS-208ENST00000470171 RGS12O14924 1447 aa21.63■■□□□ 1.05
FDPS-208ENST00000470171 KIAA0232Q92628 1395 aa21.62■■□□□ 1.05
FDPS-208ENST00000470171 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.61■■□□□ 1.05
FDPS-208ENST00000470171 NUTM2GQ5VZR2 741 aa21.61■■□□□ 1.05
FDPS-208ENST00000470171 CCDC125Q86Z20 511 aa21.61■■□□□ 1.05
FDPS-208ENST00000470171 CCDC9Q9Y3X0 531 aaKnown RBP21.61■■□□□ 1.05
FDPS-208ENST00000470171 ZC3H6P61129 1189 aaKnown RBP21.59■■□□□ 1.05
FDPS-208ENST00000470171 NWD2Q9ULI1 1742 aa21.59■■□□□ 1.05
FDPS-208ENST00000470171 COL14A1Q05707 1796 aaKnown RBP21.59■■□□□ 1.05
FDPS-208ENST00000470171 EVA1CP58658 441 aa21.58■■□□□ 1.05
FDPS-208ENST00000470171 UPF1Q92900 1129 aaKnown RBP eCLIP21.58■■□□□ 1.05
FDPS-208ENST00000470171 SLC12A5Q9H2X9 1139 aa21.58■■□□□ 1.05
FDPS-208ENST00000470171 EDC4Q6P2E9 1401 aaKnown RBP21.57■■□□□ 1.04
FDPS-208ENST00000470171 USP31Q70CQ4 1352 aa21.57■■□□□ 1.04
FDPS-208ENST00000470171 SPATA31A5Q5VU36 1347 aa21.56■■□□□ 1.04
FDPS-208ENST00000470171 SPATA31A7Q8IWB4 1347 aa21.56■■□□□ 1.04
FDPS-208ENST00000470171 AATKQ6ZMQ8 1374 aa21.56■■□□□ 1.04
FDPS-208ENST00000470171 THRAP3Q9Y2W1 955 aaKnown RBP21.55■■□□□ 1.04
FDPS-208ENST00000470171 ABCA3Q99758 1704 aa21.55■■□□□ 1.04
FDPS-208ENST00000470171 EIF4G2P78344 907 aaKnown RBP eCLIP21.54■■□□□ 1.04
FDPS-208ENST00000470171 SEPT12Q8IYM1 358 aa21.54■■□□□ 1.04
FDPS-208ENST00000470171 SLIT3O75094 1523 aa21.52■■□□□ 1.04
FDPS-208ENST00000470171 CHRNA2Q15822 529 aa21.52■■□□□ 1.04
FDPS-208ENST00000470171 SPATA31A1Q5TZJ5 1347 aa21.52■■□□□ 1.03
FDPS-208ENST00000470171 CD163L1Q9NR16 1453 aa21.52■■□□□ 1.03
FDPS-208ENST00000470171 ANKRD36BQ8N2N9 1353 aa21.51■■□□□ 1.03
FDPS-208ENST00000470171 BARGINQ6ZT62 677 aa21.51■■□□□ 1.03
FDPS-208ENST00000470171 ARHGEF25Q86VW2 580 aa21.51■■□□□ 1.03
FDPS-208ENST00000470171 A0A1W2PP64 1363 aa21.5■■□□□ 1.03
FDPS-208ENST00000470171 CRYBG1Q9Y4K1 1723 aa21.5■■□□□ 1.03
FDPS-208ENST00000470171 NRKQ7Z2Y5 1582 aa21.49■■□□□ 1.03
FDPS-208ENST00000470171 C11orf95C9JLR9 678 aaPredicted RBP21.49■■□□□ 1.03
FDPS-208ENST00000470171 KRT27Q7Z3Y8 459 aa21.49■■□□□ 1.03
FDPS-208ENST00000470171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.49■■□□□ 1.03
FDPS-208ENST00000470171 STRN4Q9NRL3 753 aa21.49■■□□□ 1.03
FDPS-208ENST00000470171 PLCH1Q4KWH8 1693 aa21.49■■□□□ 1.03
FDPS-208ENST00000470171 GLI3P10071 1580 aa21.48■■□□□ 1.03
FDPS-208ENST00000470171 PHRF1Q9P1Y6 1649 aaKnown RBP21.48■■□□□ 1.03
FDPS-208ENST00000470171 FAM98CQ17RN3 349 aaKnown RBP21.47■■□□□ 1.03
FDPS-208ENST00000470171 TCP11L2Q8N4U5 519 aa21.47■■□□□ 1.03
FDPS-208ENST00000470171 A0A0G2JS52 829 aa21.46■■□□□ 1.03
FDPS-208ENST00000470171 MYT1Q01538 1121 aa21.46■■□□□ 1.03
FDPS-208ENST00000470171 CDCA7Q9BWT1 371 aaPredicted RBP21.46■■□□□ 1.03
FDPS-208ENST00000470171 COG3Q96JB2 828 aa21.45■■□□□ 1.02
FDPS-208ENST00000470171 ABCC6O95255 1503 aa21.45■■□□□ 1.02
FDPS-208ENST00000470171 AKAP12Q02952 1782 aa21.44■■□□□ 1.02
FDPS-208ENST00000470171 NME9Q86XW9 330 aa21.44■■□□□ 1.02
FDPS-208ENST00000470171 LARP1Q6PKG0 1096 aaKnown RBP21.43■■□□□ 1.02
FDPS-208ENST00000470171 CRB1P82279 1406 aa21.43■■□□□ 1.02
FDPS-208ENST00000470171 CAMTA1Q9Y6Y1 1673 aa21.43■■□□□ 1.02
FDPS-208ENST00000470171 NRAPQ86VF7 1730 aa21.43■■□□□ 1.02
FDPS-208ENST00000470171 PIK3C2AO00443 1686 aa21.42■■□□□ 1.02
FDPS-208ENST00000470171 COL5A2P05997 1499 aaPredicted RBP21.42■■□□□ 1.02
FDPS-208ENST00000470171 SF3B2Q13435 895 aaKnown RBP21.42■■□□□ 1.02
FDPS-208ENST00000470171 WDR17Q8IZU2 1322 aa21.42■■□□□ 1.02
FDPS-208ENST00000470171 MON2Q7Z3U7 1717 aa21.41■■□□□ 1.02
FDPS-208ENST00000470171 BLMP54132 1417 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms