RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 EXOC6Q8TAG9 804 aa8.49□□□□□ -1.05
CD46-212ENST00000469535 CNTROBQ8N137 903 aa8.49□□□□□ -1.05
CD46-212ENST00000469535 GRM1Q13255 1194 aa8.49□□□□□ -1.05
CD46-212ENST00000469535 ZPR1O75312 459 aa8.48□□□□□ -1.05
CD46-212ENST00000469535 WDHD1O75717 1129 aaPredicted RBP8.48□□□□□ -1.05
CD46-212ENST00000469535 INTS3Q68E01 1043 aaKnown RBP8.48□□□□□ -1.05
CD46-212ENST00000469535 ZHX3Q9H4I2 956 aa8.48□□□□□ -1.05
CD46-212ENST00000469535 IFT140Q96RY7 1462 aa8.48□□□□□ -1.05
CD46-212ENST00000469535 PRKAR2BP31323 418 aa8.48□□□□□ -1.05
CD46-212ENST00000469535 MATR3P43243 847 aaKnown RBP eCLIP8.48□□□□□ -1.055e-7■■■■■ 27
CD46-212ENST00000469535 CLASRPQ8N2M8 674 aaKnown RBP8.48□□□□□ -1.05
CD46-212ENST00000469535 SPDYE4A6NLX3 237 aa8.48□□□□□ -1.05
CD46-212ENST00000469535 PPM1FP49593 454 aaPredicted RBP8.48□□□□□ -1.05
CD46-212ENST00000469535 TMOD2Q9NZR1 351 aa8.48□□□□□ -1.05
CD46-212ENST00000469535 DDX11L8A8MPP1 907 aa8.48□□□□□ -1.05
CD46-212ENST00000469535 SULT6B1Q6IMI4 303 aa8.48□□□□□ -1.05
CD46-212ENST00000469535 CCDC57Q2TAC2 916 aa8.47□□□□□ -1.05
CD46-212ENST00000469535 WDR78Q5VTH9 848 aa8.47□□□□□ -1.05
CD46-212ENST00000469535 VSIG10Q8N0Z9 540 aa8.47□□□□□ -1.05
CD46-212ENST00000469535 HDGFL1Q5TGJ6 251 aa8.47□□□□□ -1.05
CD46-212ENST00000469535 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.47□□□□□ -1.051e-6■■□□□ 12.5
CD46-212ENST00000469535 PEG3Q9GZU2 1588 aa8.47□□□□□ -1.05
CD46-212ENST00000469535 SCAPERQ9BY12 1400 aa8.47□□□□□ -1.05
CD46-212ENST00000469535 TNNT3P45378 269 aaPredicted RBP8.47□□□□□ -1.05
CD46-212ENST00000469535 RRP1P56182 461 aaKnown RBP8.47□□□□□ -1.05
CD46-212ENST00000469535 CCDC73Q6ZRK6 1079 aa8.47□□□□□ -1.05
CD46-212ENST00000469535 CABP1Q9NZU7 370 aa8.47□□□□□ -1.05
CD46-212ENST00000469535 HOMER1Q86YM7 354 aa8.47□□□□□ -1.05
CD46-212ENST00000469535 SYNJ2O15056 1496 aa8.46□□□□□ -1.05
CD46-212ENST00000469535 SASS6Q6UVJ0 657 aa8.46□□□□□ -1.05
CD46-212ENST00000469535 RAI14Q9P0K7 980 aa8.46□□□□□ -1.05
CD46-212ENST00000469535 SYCP1Q15431 976 aa8.46□□□□□ -1.06
CD46-212ENST00000469535 NUP133Q8WUM0 1156 aa8.46□□□□□ -1.06
CD46-212ENST00000469535 FYCO1Q9BQS8 1478 aa8.46□□□□□ -1.06
CD46-212ENST00000469535 FKBP4Q02790 459 aaKnown RBP eCLIP8.46□□□□□ -1.06
CD46-212ENST00000469535 PIBF1Q8WXW3 757 aa8.46□□□□□ -1.06
CD46-212ENST00000469535 RRBP1Q9P2E9 1410 aaKnown RBP8.46□□□□□ -1.06
CD46-212ENST00000469535 BTBD11A6QL63 1104 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 OLFM4Q6UX06 510 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 PDILTQ8N807 584 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 TTLL5Q6EMB2 1281 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 MAP4K4O95819 1239 aaPredicted RBP8.45□□□□□ -1.06
CD46-212ENST00000469535 C1orf115Q9H7X2 142 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 RUSC2Q8N2Y8 1516 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 PTCD1O75127 700 aaKnown RBP8.45□□□□□ -1.06
CD46-212ENST00000469535 PSMA5P28066 241 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 IGHMBP2P38935 993 aaKnown RBP8.45□□□□□ -1.06
CD46-212ENST00000469535 PDCL3Q9H2J4 239 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 RTEL1-TNFRSF6BF6WH68 1400 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 BCL11BQ9C0K0 894 aaPredicted RBP8.45□□□□□ -1.06
CD46-212ENST00000469535 ZNF76P36508 570 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 RRS1Q15050 365 aaKnown RBP8.45□□□□□ -1.06
CD46-212ENST00000469535 SOGA3Q5TF21 947 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 TMEM87AQ8NBN3 555 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 PANK1Q8TE04 598 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 GNAI3P08754 354 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 NACAP1Q9BZK3 213 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 TMOD3Q9NYL9 352 aa8.45□□□□□ -1.06
CD46-212ENST00000469535 ANKRD50Q9ULJ7 1429 aa8.44□□□□□ -1.06
CD46-212ENST00000469535 USP5P45974 858 aa8.44□□□□□ -1.06
CD46-212ENST00000469535 SCLT1Q96NL6 688 aa8.44□□□□□ -1.06
CD46-212ENST00000469535 ANKIB1Q9P2G1 1089 aa8.44□□□□□ -1.06
CD46-212ENST00000469535 SLC4A2P04920 1241 aa8.44□□□□□ -1.06
CD46-212ENST00000469535 CCDC69A6NI79 296 aa8.44□□□□□ -1.06
CD46-212ENST00000469535 TXLNAP40222 546 aa8.44□□□□□ -1.06
CD46-212ENST00000469535 LAMC3Q9Y6N6 1575 aa8.44□□□□□ -1.06
CD46-212ENST00000469535 STARD3NLO95772 234 aa8.44□□□□□ -1.06
CD46-212ENST00000469535 PRKRIP1Q9H875 184 aaPredicted RBP8.44□□□□□ -1.06
CD46-212ENST00000469535 TWISTNBQ3B726 338 aaPredicted RBP8.43□□□□□ -1.06
CD46-212ENST00000469535 MPRIPQ6WCQ1 1025 aa8.43□□□□□ -1.06
CD46-212ENST00000469535 IPO9Q96P70 1041 aaKnown RBP8.43□□□□□ -1.06
CD46-212ENST00000469535 ZNF692Q9BU19 519 aaPredicted RBP8.43□□□□□ -1.06
CD46-212ENST00000469535 LRP2BPQ9P2M1 347 aa8.43□□□□□ -1.06
CD46-212ENST00000469535 DNAJC5BQ9UF47 199 aa8.43□□□□□ -1.06
CD46-212ENST00000469535 GRIN2BQ13224 1484 aa8.43□□□□□ -1.06
CD46-212ENST00000469535 BRPF1P55201 1214 aaPredicted RBP8.43□□□□□ -1.06
CD46-212ENST00000469535 CRACR2BQ8N4Y2 399 aaPredicted RBP8.43□□□□□ -1.06
CD46-212ENST00000469535 ZNF652Q9Y2D9 606 aa8.43□□□□□ -1.06
CD46-212ENST00000469535 TDO2P48775 406 aa8.43□□□□□ -1.06
CD46-212ENST00000469535 ERC1Q8IUD2 1116 aa8.43□□□□□ -1.06
CD46-212ENST00000469535 SKIDA1Q1XH10 827 aa8.43□□□□□ -1.06
CD46-212ENST00000469535 CEBPZQ03701 1054 aaKnown RBP8.42□□□□□ -1.06
CD46-212ENST00000469535 RPGRQ92834 1020 aaKnown RBP8.42□□□□□ -1.06
CD46-212ENST00000469535 MAGEC2Q9UBF1 373 aaPredicted RBP8.42□□□□□ -1.06
CD46-212ENST00000469535 ABCF2Q9UG63 623 aa8.42□□□□□ -1.06
CD46-212ENST00000469535 PNISRQ8TF01 805 aaKnown RBP8.42□□□□□ -1.06
CD46-212ENST00000469535 STK3Q13188 491 aa8.42□□□□□ -1.06
CD46-212ENST00000469535 CNTLNQ9NXG0 1405 aa8.42□□□□□ -1.06
CD46-212ENST00000469535 GNAI2P04899 355 aa8.42□□□□□ -1.06
CD46-212ENST00000469535 SSBP05455 408 aaKnown RBP eCLIP8.42□□□□□ -1.06
CD46-212ENST00000469535 SDF4Q9BRK5 362 aa8.42□□□□□ -1.06
CD46-212ENST00000469535 HMGB2P26583 209 aaKnown RBP8.42□□□□□ -1.06
CD46-212ENST00000469535 RDXP35241 583 aaKnown RBP8.42□□□□□ -1.06
CD46-212ENST00000469535 CUX1P39880 1505 aa8.41□□□□□ -1.06
CD46-212ENST00000469535 GPS2Q13227 327 aa8.41□□□□□ -1.06
CD46-212ENST00000469535 RUFY1Q96T51 708 aa8.41□□□□□ -1.06
CD46-212ENST00000469535 WWC3Q9ULE0 1092 aa8.41□□□□□ -1.06
CD46-212ENST00000469535 UBAP1LF5GYI3 381 aa8.41□□□□□ -1.06
CD46-212ENST00000469535 CCDC173Q0VFZ6 552 aa8.41□□□□□ -1.06
CD46-212ENST00000469535 NEBLO76041 1014 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms