RNA–Protein interactions for RNA: ENST00000469108.1

CDK5-202, Transcript of cyclin dependent kinase 5, humanhuman

TSL 3

Gene CDK5, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-202ENST00000469108 CDK12Q9NYV4 1490 aaPredicted RBP31.74■■■□□ 2.67
CDK5-202ENST00000469108 PAK3O75914 559 aaPredicted RBP31.74■■■□□ 2.67
CDK5-202ENST00000469108 HAP1P54257 671 aaPredicted RBP31.74■■■□□ 2.67
CDK5-202ENST00000469108 QTRT2Q9H974 415 aaKnown RBP31.74■■■□□ 2.67
CDK5-202ENST00000469108 BCL9LQ86UU0 1499 aa31.73■■■□□ 2.67
CDK5-202ENST00000469108 NWD2Q9ULI1 1742 aa31.73■■■□□ 2.67
CDK5-202ENST00000469108 PHRF1Q9P1Y6 1649 aaKnown RBP31.72■■■□□ 2.67
CDK5-202ENST00000469108 SLIT2O94813 1529 aa31.72■■■□□ 2.67
CDK5-202ENST00000469108 PLEKHG5O94827 1062 aa31.72■■■□□ 2.67
CDK5-202ENST00000469108 AKAP12Q02952 1782 aa31.71■■■□□ 2.67
CDK5-202ENST00000469108 ATRNO75882 1429 aa31.7■■■□□ 2.67
CDK5-202ENST00000469108 TIMELESSQ9UNS1 1208 aa31.69■■■□□ 2.66
CDK5-202ENST00000469108 RBM6P78332 1123 aaKnown RBP31.68■■■□□ 2.66
CDK5-202ENST00000469108 TRPC5Q9UL62 973 aaPredicted RBP31.68■■■□□ 2.66
CDK5-202ENST00000469108 CABP1Q9NZU7 370 aa31.67■■■□□ 2.66
CDK5-202ENST00000469108 COL14A1Q05707 1796 aaKnown RBP31.66■■■□□ 2.66
CDK5-202ENST00000469108 ATAD2Q6PL18 1390 aa31.65■■■□□ 2.66
CDK5-202ENST00000469108 BRD4O60885 1362 aaPredicted RBP31.64■■■□□ 2.66
CDK5-202ENST00000469108 RGS12O14924 1447 aa31.64■■■□□ 2.66
CDK5-202ENST00000469108 USP6P35125 1406 aa31.64■■■□□ 2.66
CDK5-202ENST00000469108 NRAPQ86VF7 1730 aa31.63■■■□□ 2.65
CDK5-202ENST00000469108 CCER1Q8TC90 406 aaPredicted RBP31.61■■■□□ 2.65
CDK5-202ENST00000469108 NRKQ7Z2Y5 1582 aa31.6■■■□□ 2.65
CDK5-202ENST00000469108 UNC5CLQ8IV45 518 aa31.6■■■□□ 2.65
CDK5-202ENST00000469108 MON2Q7Z3U7 1717 aa31.6■■■□□ 2.65
CDK5-202ENST00000469108 PIK3C2AO00443 1686 aa31.58■■■□□ 2.65
CDK5-202ENST00000469108 SSH2Q76I76 1423 aa31.58■■■□□ 2.65
CDK5-202ENST00000469108 GLI3P10071 1580 aa31.57■■■□□ 2.64
CDK5-202ENST00000469108 FAM83GA6ND36 823 aa31.57■■■□□ 2.64
CDK5-202ENST00000469108 NUTM2GQ5VZR2 741 aa31.57■■■□□ 2.64
CDK5-202ENST00000469108 ABTB2Q8N961 1025 aa31.57■■■□□ 2.64
CDK5-202ENST00000469108 ST20-MTHFSA0A0A6YYL1 179 aa31.56■■■□□ 2.64
CDK5-202ENST00000469108 TESK2Q96S53 571 aa31.55■■■□□ 2.64
CDK5-202ENST00000469108 CPSF1Q10570 1443 aaKnown RBP31.55■■■□□ 2.64
CDK5-202ENST00000469108 USP47Q96K76 1375 aa31.55■■■□□ 2.64
CDK5-202ENST00000469108 USP19O94966 1318 aa31.52■■■□□ 2.64
CDK5-202ENST00000469108 GJD4Q96KN9 370 aaPredicted RBP31.52■■■□□ 2.64
CDK5-202ENST00000469108 ZNF692Q9BU19 519 aaPredicted RBP31.51■■■□□ 2.63
CDK5-202ENST00000469108 KIAA0232Q92628 1395 aa31.5■■■□□ 2.63
CDK5-202ENST00000469108 CD163L1Q9NR16 1453 aa31.5■■■□□ 2.63
CDK5-202ENST00000469108 NLRP13Q86W25 1043 aa31.49■■■□□ 2.63
CDK5-202ENST00000469108 PUS7Q96PZ0 661 aaKnown RBP31.49■■■□□ 2.63
CDK5-202ENST00000469108 VPS72Q15906 364 aa31.48■■■□□ 2.63
CDK5-202ENST00000469108 PRDM11Q9NQV5 511 aa31.48■■■□□ 2.63
CDK5-202ENST00000469108 BTG4Q9NY30 223 aa31.48■■■□□ 2.63
CDK5-202ENST00000469108 SLIT3O75094 1523 aa31.48■■■□□ 2.63
CDK5-202ENST00000469108 KTN1Q86UP2 1357 aaKnown RBP31.47■■■□□ 2.63
CDK5-202ENST00000469108 SLC24A1O60721 1099 aa31.47■■■□□ 2.63
CDK5-202ENST00000469108 TTC21BQ7Z4L5 1316 aa31.45■■■□□ 2.62
CDK5-202ENST00000469108 LMO7Q8WWI1 1683 aa31.44■■■□□ 2.62
CDK5-202ENST00000469108 ZC3H6P61129 1189 aaKnown RBP31.44■■■□□ 2.62
CDK5-202ENST00000469108 BRWD3Q6RI45 1802 aa31.44■■■□□ 2.62
CDK5-202ENST00000469108 CPDO75976 1380 aa31.43■■■□□ 2.62
CDK5-202ENST00000469108 TMC1Q8TDI8 760 aa31.43■■■□□ 2.62
CDK5-202ENST00000469108 USP54Q70EL1 1684 aa31.43■■■□□ 2.62
CDK5-202ENST00000469108 TTC21AQ8NDW8 1320 aa31.43■■■□□ 2.62
CDK5-202ENST00000469108 NLRP6P59044 892 aa31.42■■■□□ 2.62
CDK5-202ENST00000469108 GCP02774 474 aa31.41■■■□□ 2.62
CDK5-202ENST00000469108 CHRNA2Q15822 529 aa31.41■■■□□ 2.62
CDK5-202ENST00000469108 NINLQ9Y2I6 1382 aa31.41■■■□□ 2.62
CDK5-202ENST00000469108 SLC12A5Q9H2X9 1139 aa31.4■■■□□ 2.62
CDK5-202ENST00000469108 CCDC9Q9Y3X0 531 aaKnown RBP31.39■■■□□ 2.62
CDK5-202ENST00000469108 HDGFL2Q7Z4V5 671 aaPredicted RBP31.37■■■□□ 2.61
CDK5-202ENST00000469108 UPF1Q92900 1129 aaKnown RBP eCLIP31.37■■■□□ 2.61
CDK5-202ENST00000469108 A0A1W2PP64 1363 aa31.37■■■□□ 2.61
CDK5-202ENST00000469108 CAMTA1Q9Y6Y1 1673 aa31.37■■■□□ 2.61
CDK5-202ENST00000469108 TMF1P82094 1093 aa31.36■■■□□ 2.61
CDK5-202ENST00000469108 EDC4Q6P2E9 1401 aaKnown RBP31.35■■■□□ 2.61
CDK5-202ENST00000469108 TERF2IPQ9NYB0 399 aa31.35■■■□□ 2.61
CDK5-202ENST00000469108 EP400Q96L91 3159 aa31.34■■■□□ 2.61
CDK5-202ENST00000469108 COL18A1P39060 1754 aa31.34■■■□□ 2.61
CDK5-202ENST00000469108 SPATA31A5Q5VU36 1347 aa31.32■■■□□ 2.6
CDK5-202ENST00000469108 SPATA31A7Q8IWB4 1347 aa31.32■■■□□ 2.6
CDK5-202ENST00000469108 ONECUT3O60422 494 aaPredicted RBP31.32■■■□□ 2.6
CDK5-202ENST00000469108 NFAT5O94916 1531 aa31.31■■■□□ 2.6
CDK5-202ENST00000469108 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.31■■■□□ 2.6
CDK5-202ENST00000469108 MYOM1P52179 1685 aa31.31■■■□□ 2.6
CDK5-202ENST00000469108 THSD7AQ9UPZ6 1657 aa31.3■■■□□ 2.6
CDK5-202ENST00000469108 USP31Q70CQ4 1352 aa31.3■■■□□ 2.6
CDK5-202ENST00000469108 SEPT12Q8IYM1 358 aa31.29■■■□□ 2.6
CDK5-202ENST00000469108 RGPD5Q99666 1765 aa31.28■■■□□ 2.6
CDK5-202ENST00000469108 STRN4Q9NRL3 753 aa31.28■■■□□ 2.6
CDK5-202ENST00000469108 COL5A2P05997 1499 aaPredicted RBP31.27■■■□□ 2.6
CDK5-202ENST00000469108 KCNH5Q8NCM2 988 aa31.27■■■□□ 2.6
CDK5-202ENST00000469108 AATKQ6ZMQ8 1374 aa31.27■■■□□ 2.6
CDK5-202ENST00000469108 LTN1O94822 1766 aa31.26■■■□□ 2.59
CDK5-202ENST00000469108 CDCA8Q53HL2 280 aa31.26■■■□□ 2.59
CDK5-202ENST00000469108 NME9Q86XW9 330 aa31.26■■■□□ 2.59
CDK5-202ENST00000469108 ANKRD36BQ8N2N9 1353 aa31.26■■■□□ 2.59
CDK5-202ENST00000469108 SPATA31A1Q5TZJ5 1347 aa31.25■■■□□ 2.59
CDK5-202ENST00000469108 FAM98CQ17RN3 349 aaKnown RBP31.25■■■□□ 2.59
CDK5-202ENST00000469108 ZRANB1Q9UGI0 708 aa31.24■■■□□ 2.59
CDK5-202ENST00000469108 ZBTB7CA1YPR0 619 aa31.23■■■□□ 2.59
CDK5-202ENST00000469108 EVA1CP58658 441 aa31.23■■■□□ 2.59
CDK5-202ENST00000469108 ABCC6O95255 1503 aa31.22■■■□□ 2.59
CDK5-202ENST00000469108 OVOS2A0A0J9YW53 1432 aa31.22■■■□□ 2.59
CDK5-202ENST00000469108 OVOS2Q6IE36 1432 aa31.22■■■□□ 2.59
CDK5-202ENST00000469108 ARHGEF25Q86VW2 580 aa31.21■■■□□ 2.59
CDK5-202ENST00000469108 SOX12O15370 315 aa31.2■■■□□ 2.59
CDK5-202ENST00000469108 LARP1Q6PKG0 1096 aaKnown RBP31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms